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List of works by Joy Scaria

Advances in molecular diagnostics.

scientific article published on 27 May 2013

Analysis of Ultra Low Genome Conservation in Clostridium difficile ⬇️

scientific article published on December 8, 2010

Antibiotic-Resistant Escherichia coli and Sequence Type 131 in Fecal Colonization in Dogs in Taiwan

scientific article published on 20 September 2020

Antimicrobial-Resistant from Environmental Waters in Northern Colorado

scientific article published on 18 February 2019

Association of Flavonifractor plautii, a Flavonoid-Degrading Bacterium, with the Gut Microbiome of Colorectal Cancer Patients in India

scientific article published on 12 November 2019

Clostridium difficile Transcriptome Analysis Using Pig Ligated Loop Model Reveals Modulation of Pathways Not Modulated In Vitro ⬇️

scientific article published on June 1, 2011

Comparative Genomic Studies of Heidelberg Isolated From Chicken- and Turkey-Associated Farm Environmental Samples

article

Comparative genomic and phenomic analysis of Clostridium difficile and Clostridium sordellii, two related pathogens with differing host tissue preference.

scientific article published on 10 June 2015

Comparative nutritional and chemical phenome of Clostridium difficile isolates determined using phenotype microarrays

scientific article

Comparison of phenotypic and genotypic antimicrobial profiles in Escherichia coli and Salmonella enterica from the same dairy cattle farms.

scientific article

Complete Genome Sequence of a Highly Pathogenic Avian Influenza Virus (H5N2) Associated with an Outbreak in Commercial Chickens, Iowa, USA, 2015.

scientific article published on 11 June 2015

Description of Collinsella avium sp. nov., a new member of the Collinsella genus isolated from the ceacum of feral chicken

scientific article published in 2021

Development of a microarray for identification of pathogenic Clostridium spp

scientific article

Differential stress transcriptome landscape of historic and recently emerged hypervirulent strains of Clostridium difficile strains determined using RNA-seq

scientific article published on 7 November 2013

Distribution and factors associated with Salmonella enterica genotypes in a diverse population of humans and animals in Qatar using multi-locus sequence typing (MLST).

scientific article published on 26 November 2015

Draft Genome Sequences of 37 Salmonella enterica Strains Isolated from Poultry Sources in Nigeria.

scientific article published on 5 May 2016

Draft Genome Sequences of Salmonella enterica subsp. Serotype Heidelberg from Chicken and Turkey Farm Environments

scientific article published on 21 November 2018

Draft Genome Sequences of Three Flavobacterium psychrophilum Strains Isolated from Coldwater Disease Outbreaks at Three Production Hatcheries

scientific article published on 10 March 2016

Enhancing the one health initiative by using whole genome sequencing to monitor antimicrobial resistance of animal pathogens: Vet-LIRN collaborative project with veterinary diagnostic laboratories in United States and Canada

article

Genetic Relatedness Among Shiga Toxin-Producing Escherichia coli Isolated Along the Animal Food Supply Chain and in Gastroenteritis Cases in Qatar Using Multilocus Sequence Typing

scientific article published on 30 March 2017

Genome Sequences of Salmonella enterica subsp. enterica Serovar Lubbock Strains Isolated from Liver Abscesses of Feedlot Cattle

scientific article published on 5 May 2016

Genome divergence and increased virulence of outbreak associated subspecies

scientific article published on 24 December 2018

Genotypic and Phenotypic Characterization of Salmonella Isolated from Fresh Ground Meats Obtained from Retail Grocery Stores in the Brookings, South Dakota, Area

scientific article published on 01 September 2018

Gut Microbial Dynamics during Conventionalization of Germfree Chicken

scientific article published on 27 March 2019

High-Throughput Screening for Biomarker Discovery

scientific article published on 28 April 2015

Identification of Clostridioides difficile-Inhibiting Gut Commensals Using Culturomics, Phenotyping, and Combinatorial Community Assembly

scientific article published on 04 February 2020

Metagenomic characterization of the effect of feed additives on the gut microbiome and antibiotic resistome of feedlot cattle

scientific article published on 25 September 2017

Microarray for molecular typing of Salmonella enterica serovars

scientific article published on May 2008

Phenotypic and transcriptomic response of auxotrophic Mycobacterium avium subsp. paratuberculosis leuD mutant under environmental stress.

scientific article

Population structure of Salmonella enterica serotype Mbandaka reveals similar virulence potential irrespective of source and phylogenomic stratification

scientific article published on 16 September 2020

Proteomic comparison of historic and recently emerged hypervirulent Clostridium difficile strains.

scientific article

Taxono-genomics description of Olsenella lakotia SW165 T sp. nov., a new anaerobic bacterium isolated from cecum of feral chicken

scientific article published on 08 September 2020

Taxono-genomics description of Olsenella lakotia SW165T sp. nov., a new anaerobic bacterium isolated from the cecum of feral chicken

scientific article published in 2020

The Flavonoid Metabolite 2,4,6-Trihydroxybenzoic Acid Is a CDK Inhibitor and an Anti-Proliferative Agent: A Potential Role in Cancer Prevention

scientific article published on 26 March 2019

The Microbial Nitrogen Cycling, Bacterial Community Composition, and Functional Potential in a Natural Grassland Are Stable from Breaking Dormancy to Being Dormant Again

scientific article published on 28 April 2022

The unique composition of Indian gut microbiome, gene catalogue, and associated fecal metabolome deciphered using multi-omics approaches

article

Transcriptional profiling of Clostridium difficile and Caco-2 cells during infection.

scientific article

Whole genome sequencing-based detection of antimicrobial resistance and virulence in non-typhoidal Salmonella enterica isolated from wildlife

scientific article published on 21 November 2017

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