List of works - Gregory A Wray

A Chromosome-level Genome Assembly of the Highly Heterozygous Sea Urchin<i>Echinometra</i>sp. EZ Reveals Adaptation in the Regulatory Regions of Stress Response Genes

scientific article published in 2022

A Pipeline to Determine RT-QPCR Control Genes for Evolutionary Studies: Application to Primate Gene Expression across Multiple Tissues ⬇️

scientific article published on September 2, 2010

A Potential Role for Glucose Transporters in the Evolution of Human Brain Size ⬇️

scientific article published on October 7, 2011

Abundant raw material for cis-regulatory evolution in humans

scientific article

Analysis of synaptic gene expression in the neocortex of primates reveals evolutionary changes in glutamatergic neurotransmission

scientific article published on 9 January 2014

Ancient and recent positive selection transformed opioid cis-regulation in humans

scientific article

Ancient polymorphism and functional variation in the primate MHC-DQA1 5' cis-regulatory region

scholarly article

Arrays in rays: terminal addition in echinoderms and its correlation with gene expression

scientific article

Both noncoding and protein-coding RNAs contribute to gene expression evolution in the primate brain

scientific article

Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris

scientific article

Comparative embryology without a microscope: using genomic approaches to understand the evolution of development

scientific article

Comparative expression analysis of the phosphocreatine circuit in extant primates: Implications for human brain evolution ⬇️

scientific article published on December 28, 2010

Contrasts between adaptive coding and noncoding changes during human evolution

scientific article

Convergent adaptation of human lactase persistence in Africa and Europe

scientific article

Coordinated Genome-Wide Modifications within Proximal Promoter Cis-regulatory Elements during Vertebrate Evolution ⬇️

scientific article published on November 30, 2010

Culture of echinoderm larvae through metamorphosis

scientific article

Dating branches on the tree of life using DNA

scientific article

Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar's lemurs

scientific article

Does evolutionary theory need a rethink?

scientific article

EchinoDB, an application for comparative transcriptomics of deeply-sampled clades of echinoderms.

scientific article published on 22 January 2016

Evolution of a malaria resistance gene in wild primates

scientific article

Evolutionary Divergence of Gene and Protein Expression in the Brains of Humans and Chimpanzees

scientific article

Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites

scientific article

Evolutionary genetics in wild primates: combining genetic approaches with field studies of natural populations

scientific article

Extensive Changes in the Expression of the Opioid Genes between Humans and Chimpanzees ⬇️

scientific article published on November 15, 2010

Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection

scientific article

Gene expression and adaptive noncoding changes during human evolution

scientific article

Genetic basis for divergence in developmental gene expression in two closely related sea urchins

scientific article published on 13 April 2020

Genetic comparisons yield insight into the evolution of enamel thickness during human evolution

scientific article

Genetics of gene expression responses to temperature stress in a sea urchin gene network

scientific article

Genetics. Enhancing gene regulation

scientific article

Genomic Characterization of the Evolutionary Potential of the Sea Urchin Strongylocentrotus droebachiensis Facing Ocean Acidification

scientific article

Genomic features that predict allelic imbalance in humans suggest patterns of constraint on gene expression variation

scientific article published on 08 June 2009

Genomic insights into<i>Plasmodium vivax</i>population structure and diversity in central Africa

Genomic signatures of diet-related shifts during human origins

scientific article (publication date: 7 April 2011)

High spatial resolution proteomic comparison of the brain in humans and chimpanzees.

scientific article

Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships

scientific article published on 29 May 2009

Molecular clocks and the early evolution of metazoan nervous systems

scientific article

Multiple Functional Variants in cis Modulate PDYN Expression

scientific article

Nodal and BMP expression during the transition to pentamery in the sea urchin Heliocidaris erythrogramma: insights into patterning the enigmatic echinoderm body plan.

scientific article

Population genetic and phylogenetic evidence for positive selection on regulatory mutations at the factor VII locus in humans

scientific article

Positive selection on MMP3 regulation has shaped heart disease risk

scientific article

Positive selection within the genomes of SARS-CoV-2 and other Coronaviruses independent of impact on protein function

scientific article published on 16 October 2020

Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution.

scientific article

Social environment influences the relationship between genotype and gene expression in wild baboons.

scientific article published on 8 April 2013

The evolution of transcriptional regulation in eukaryotes

scientific article (publication date: September 2003)

The evolutionary significance of cis-regulatory mutations

scientific article

The impact of gene expression variation on the robustness and evolvability of a developmental gene regulatory network.

scientific article

The invertebrate deuterostomes: an introduction to their phylogeny, reproduction, development, and genomics.

scientific article

The phylogeny of extant starfish (Asteroidea: Echinodermata) including Xyloplax, based on comparative transcriptomics

scientific article

Transcriptional regulation and the evolution of development.

scientific article published on January 2003

Transcriptomic analysis of the highly derived radial body plan of a sea urchin

scientific article (publication date: April 2014)

Whole-Genome Positive Selection and Habitat-Driven Evolution in a Shallow and a Deep-Sea Urchin ⬇️

scientific article published on October 8, 2010

List of works by Gregory A Wray

A Chromosome-level Genome Assembly of the Highly Heterozygous Sea Urchin<i>Echinometra</i>sp. EZ Reveals Adaptation in the Regulatory Regions of Stress Response Genes

A Pipeline to Determine RT-QPCR Control Genes for Evolutionary Studies: Application to Primate Gene Expression across Multiple Tissues ⬇️

A Potential Role for Glucose Transporters in the Evolution of Human Brain Size ⬇️

Abundant raw material for cis-regulatory evolution in humans

Analysis of synaptic gene expression in the neocortex of primates reveals evolutionary changes in glutamatergic neurotransmission

Ancient and recent positive selection transformed opioid cis-regulation in humans

Ancient polymorphism and functional variation in the primate MHC-DQA1 5' cis-regulatory region

Arrays in rays: terminal addition in echinoderms and its correlation with gene expression

Both noncoding and protein-coding RNAs contribute to gene expression evolution in the primate brain

Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris

Comparative embryology without a microscope: using genomic approaches to understand the evolution of development

Comparative expression analysis of the phosphocreatine circuit in extant primates: Implications for human brain evolution ⬇️

Contrasts between adaptive coding and noncoding changes during human evolution

Convergent adaptation of human lactase persistence in Africa and Europe

Coordinated Genome-Wide Modifications within Proximal Promoter Cis-regulatory Elements during Vertebrate Evolution ⬇️

Culture of echinoderm larvae through metamorphosis

Dating branches on the tree of life using DNA

Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar's lemurs

Does evolutionary theory need a rethink?

EchinoDB, an application for comparative transcriptomics of deeply-sampled clades of echinoderms.

Evolution of a malaria resistance gene in wild primates

Evolutionary Divergence of Gene and Protein Expression in the Brains of Humans and Chimpanzees

Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites

Evolutionary genetics in wild primates: combining genetic approaches with field studies of natural populations

Extensive Changes in the Expression of the Opioid Genes between Humans and Chimpanzees ⬇️

Extensive evolutionary changes in regulatory element activity during human origins are associated with altered gene expression and positive selection

Gene expression and adaptive noncoding changes during human evolution

Genetic basis for divergence in developmental gene expression in two closely related sea urchins

Genetic comparisons yield insight into the evolution of enamel thickness during human evolution

Genetics of gene expression responses to temperature stress in a sea urchin gene network

Genetics. Enhancing gene regulation

Genomic Characterization of the Evolutionary Potential of the Sea Urchin Strongylocentrotus droebachiensis Facing Ocean Acidification

Genomic features that predict allelic imbalance in humans suggest patterns of constraint on gene expression variation

Genomic insights into<i>Plasmodium vivax</i>population structure and diversity in central Africa

Genomic signatures of diet-related shifts during human origins

High spatial resolution proteomic comparison of the brain in humans and chimpanzees.

Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships

Molecular clocks and the early evolution of metazoan nervous systems

Multiple Functional Variants in cis Modulate PDYN Expression

Nodal and BMP expression during the transition to pentamery in the sea urchin Heliocidaris erythrogramma: insights into patterning the enigmatic echinoderm body plan.

Population genetic and phylogenetic evidence for positive selection on regulatory mutations at the factor VII locus in humans

Positive selection on MMP3 regulation has shaped heart disease risk

Positive selection within the genomes of SARS-CoV-2 and other Coronaviruses independent of impact on protein function

Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution.

Social environment influences the relationship between genotype and gene expression in wild baboons.

The evolution of transcriptional regulation in eukaryotes

The evolutionary significance of cis-regulatory mutations

The impact of gene expression variation on the robustness and evolvability of a developmental gene regulatory network.

The invertebrate deuterostomes: an introduction to their phylogeny, reproduction, development, and genomics.

The phylogeny of extant starfish (Asteroidea: Echinodermata) including Xyloplax, based on comparative transcriptomics

Transcriptional regulation and the evolution of development.

Transcriptomic analysis of the highly derived radial body plan of a sea urchin

Whole-Genome Positive Selection and Habitat-Driven Evolution in a Shallow and a Deep-Sea Urchin ⬇️