List of works - Kerstin Lindblad-Toh

Full-length transcriptome assembly from RNA-Seq data without a reference genome

scientific article

Initial sequencing and comparative analysis of the mouse genome

scientific article

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

scientific article published in June 2007

Evolution of genes and genomes on the Drosophila phylogeny

scientific article

Genome sequence, comparative analysis and haplotype structure of the domestic dog

scientific article

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

scientific article

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

scientific article

Genomic maps and comparative analysis of histone modifications in human and mouse

scientific article (publication date: 28 January 2005)

The genomic basis of adaptive evolution in threespine sticklebacks

scientific article

A high-resolution map of human evolutionary constraint using 29 mammals

scientific article

Whole-genome resequencing reveals loci under selection during chicken domestication

scientific article

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

scientific article

The genomic substrate for adaptive radiation in African cichlid fish

scientific article

Genome sequence, comparative analysis, and population genetics of the domestic horse

scientific article

The genomic signature of dog domestication reveals adaptation to a starch-rich diet

scientific article

The mosaic structure of variation in the laboratory mouse genome

scientific article published in Nature

The African coelacanth genome provides insights into tetrapod evolution

scientific article

Identification and classification of conserved RNA secondary structures in the human genome

scientific article

The genome of the green anole lizard and a comparative analysis with birds and mammals

scientific article

Lineage-specific biology revealed by a finished genome assembly of the mouse

scientific article

Distinguishing protein-coding and noncoding genes in the human genome

scientific article

Efficient mapping of mendelian traits in dogs through genome-wide association

scientific article

Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse

article by Kerstin Lindblad-Toh et al published April 2000 in Nature Genetics

Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites

scientific article

28-way vertebrate alignment and conservation track in the UCSC Genome Browser

scientific article (publication date: December 2007)

Initial sequence and comparative analysis of the cat genome

scientific article

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

scientific article

Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping

scientific article

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons

scientific article

Molecular subtypes of osteosarcoma identified by reducing tumor heterogeneity through an interspecies comparative approach

scientific article

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

scientific article

Sequencing the nuclear genome of the extinct woolly mammoth

scientific article

The dog as a cancer model

article

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

scientific article published in June 2007

Leader of the pack: gene mapping in dogs and other model organisms

scientific article published on September 2008

Loss-of-heterozygosity analysis of small-cell lung carcinomas using single-nucleotide polymorphism arrays

scientific article published on 01 September 2000

Convergent evolution of the genomes of marine mammals

scientific article published on 26 January 2015

Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in Ridgeback dogs

scientific article

Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing

scientific article

A cis-acting regulatory mutation causes premature hair graying and susceptibility to melanoma in the horse

scientific article

Rethinking dog domestication by integrating genetics, archeology, and biogeography

scientific article

An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts

scientific article

A high density SNP array for the domestic horse and extant Perissodactyla: utility for association mapping, genetic diversity, and phylogeny studies

scientific article

Genome-wide association analysis reveals a SOD1 mutation in canine degenerative myelopathy that resembles amyotrophic lateral sclerosis

scientific article

Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome

scientific article published on 17 October 2011

A mutation in hairless dogs implicates FOXI3 in ectodermal development

scientific article

Genome-wide association mapping identifies multiple loci for a canine SLE-related disease complex

article

ZBED6, a novel transcription factor derived from a domesticated DNA transposon regulates IGF2 expression and muscle growth

scientific article

Distinct B-cell and T-cell lymphoproliferative disease prevalence among dog breeds indicates heritable risk

scientific article

Genome-wide synteny through highly sensitive sequence alignment: Satsuma

scientific article

List of works by Kerstin Lindblad-Toh

Full-length transcriptome assembly from RNA-Seq data without a reference genome

Initial sequencing and comparative analysis of the mouse genome

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Evolution of genes and genomes on the Drosophila phylogeny

Genome sequence, comparative analysis and haplotype structure of the domestic dog

Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

Genomic maps and comparative analysis of histone modifications in human and mouse

The genomic basis of adaptive evolution in threespine sticklebacks

A high-resolution map of human evolutionary constraint using 29 mammals

Whole-genome resequencing reveals loci under selection during chicken domestication

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

The genomic substrate for adaptive radiation in African cichlid fish

Genome sequence, comparative analysis, and population genetics of the domestic horse

The genomic signature of dog domestication reveals adaptation to a starch-rich diet

The mosaic structure of variation in the laboratory mouse genome

The African coelacanth genome provides insights into tetrapod evolution

Identification and classification of conserved RNA secondary structures in the human genome

The genome of the green anole lizard and a comparative analysis with birds and mammals

Lineage-specific biology revealed by a finished genome assembly of the mouse

Distinguishing protein-coding and noncoding genes in the human genome

Efficient mapping of mendelian traits in dogs through genome-wide association

Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse

Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites

28-way vertebrate alignment and conservation track in the UCSC Genome Browser

Initial sequence and comparative analysis of the cat genome

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons

Molecular subtypes of osteosarcoma identified by reducing tumor heterogeneity through an interspecies comparative approach

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

Sequencing the nuclear genome of the extinct woolly mammoth

The dog as a cancer model

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

Leader of the pack: gene mapping in dogs and other model organisms

Loss-of-heterozygosity analysis of small-cell lung carcinomas using single-nucleotide polymorphism arrays

Convergent evolution of the genomes of marine mammals

Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in Ridgeback dogs

Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing

A cis-acting regulatory mutation causes premature hair graying and susceptibility to melanoma in the horse

Rethinking dog domestication by integrating genetics, archeology, and biogeography

An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts

A high density SNP array for the domestic horse and extant Perissodactyla: utility for association mapping, genetic diversity, and phylogeny studies

Genome-wide association analysis reveals a SOD1 mutation in canine degenerative myelopathy that resembles amyotrophic lateral sclerosis

Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome

A mutation in hairless dogs implicates FOXI3 in ectodermal development

Genome-wide association mapping identifies multiple loci for a canine SLE-related disease complex

ZBED6, a novel transcription factor derived from a domesticated DNA transposon regulates IGF2 expression and muscle growth

Distinct B-cell and T-cell lymphoproliferative disease prevalence among dog breeds indicates heritable risk

Genome-wide synteny through highly sensitive sequence alignment: Satsuma