List of works by Ralph S. Baric

3B11-N, a monoclonal antibody against MERS-CoV, reduces lung pathology in rhesus monkeys following intratracheal inoculation of MERS-CoV Jordan-n3/2012

scientific article published on 29 January 2016

A Mouse-Adapted SARS-CoV-2 Induces Acute Lung Injury and Mortality in Standard Laboratory Mice

scientific article published on 23 September 2020

A Newcastle Disease Virus (NDV) Expressing a Membrane-Anchored Spike as a Cost-Effective Inactivated SARS-CoV-2 Vaccine

scientific article published on 17 December 2020

A Newcastle disease virus (NDV) expressing membrane-anchored spike as a cost-effective inactivated SARS-CoV-2 vaccine

scientific article published on 31 July 2020

A Reverse Genetics Platform That Spans the Zika Virus Family Tree

scientific article (publication date: 7 March 2017)

A Reverse genetics system for dsRNA viruses.

scientific article published in April 2007

A SARS-like cluster of circulating bat coronaviruses shows potential for human emergence

scientific article published on 9 November 2015

A Simulation Framework to Investigate in vitro Viral Infection Dynamics

scientific article published on May 2013

A Simulation Framework to Investigate in vitro Viral Infection Dynamics

article

A Sindbis virus variant with a cell-determined latent period

scientific article

A Single-Dose Intranasal ChAd Vaccine Protects Upper and Lower Respiratory Tracts against SARS-CoV-2

scientific article published on 19 August 2020

A broadly cross-reactive antibody neutralizes and protects against sarbecovirus challenge in mice

scientific article published on 26 January 2022

A case-control study of tobacco use and other non-occupational risk factors for lymphoma subtypes defined by t(14; 18) translocations and bcl-2 expression

scientific article

A case-control study of tobacco use and other non-occupational risk factors for t(14;18) subtypes of non-Hodgkin's lymphoma (United States).

scientific article published on March 2002

A chimeric virus-mouse model system for evaluating the function and inhibition of papain-like proteases of emerging coronaviruses

scientific article

A compendium of multi-omics data illuminating host responses to lethal human virus infections

scientific article published in 2024

A comprehensive collection of systems biology data characterizing the host response to viral infection.

scientific article

A decade after SARS: strategies for controlling emerging coronaviruses

scientific article (publication date: December 2013)

A double-inactivated severe acute respiratory syndrome coronavirus vaccine provides incomplete protection in mice and induces increased eosinophilic proinflammatory pulmonary response upon challenge

scientific article published on 21 September 2011

A highly immunogenic and effective measles virus-based Th1-biased COVID-19 vaccine

scientific article published on 30 November 2020

A live attenuated severe acute respiratory syndrome coronavirus is immunogenic and efficacious in golden Syrian hamsters

scientific article published on 7 May 2008

A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease ⬇️

scientific article

A mouse model for Betacoronavirus subgroup 2c using a bat coronavirus strain HKU5 variant

scientific article

A mouse model for MERS coronavirus-induced acute respiratory distress syndrome

scientific article

A mouse-adapted SARS-CoV-2 model for the evaluation of COVID-19 medical countermeasures

scientific article published on 08 May 2020

A mouse-adapted SARS-coronavirus causes disease and mortality in BALB/c mice

scientific article

A mouse-adapted model of SARS-CoV-2 to test COVID-19 countermeasures

scientific article published on 27 August 2020

A network integration approach to predict conserved regulators related to pathogenicity of influenza and SARS-CoV respiratory viruses

scientific article

A new mouse-adapted strain of SARS-CoV as a lethal model for evaluating antiviral agents in vitro and in vivo

scientific article (publication date: 20 December 2009)

A new quaternary structure epitope on dengue virus serotype 2 is the target of durable type-specific neutralizing antibodies

scientific article

A newly identified MHV-A59 ORF1a polypeptide p65 is temperature sensitive in two RNA negative mutants.

scientific article published in January 1993

A novel mutation in murine hepatitis virus nsp5, the viral 3C-like proteinase, causes temperature-sensitive defects in viral growth and protein processing

scientific article published on 2 April 2008

A simian hemorrhagic fever virus isolate from persistently infected baboons efficiently induces hemorrhagic fever disease in Japanese macaques

scientific article

A simple strategy to assemble infectious RNA and DNA clones

scientific article

A spike-modified Middle East respiratory syndrome coronavirus (MERS-CoV) infectious clone elicits mild respiratory disease in infected rhesus macaques

scientific article published in Scientific Reports

A strong association between mefloquine and halofantrine resistance and amplification, overexpression, and mutation in the P-glycoprotein gene homolog (pfmdr) of Plasmodium falciparum in vitro

scientific article published on November 1994

Acute SARS-CoV-2 Infection is Highly Cytopathic, Elicits a Robust Innate Immune Response and is Efficiently Prevented by EIDD-2801

scientific article published on 24 September 2020

Adaptive evolution influences the infectious dose of MERS-CoV necessary to achieve severe respiratory disease

scientific article

Agricultural risk factors for t(14;18) subtypes of non-Hodgkin's lymphoma

scientific article

Airway Memory CD4(+) T Cells Mediate Protective Immunity against Emerging Respiratory Coronaviruses

scientific article published on 6 June 2016

Allelic Variation in the Toll-Like Receptor Adaptor Protein Ticam2 Contributes to SARS-Coronavirus Pathogenesis in Mice.

scientific article

Alphavirus-adjuvanted norovirus-like particle vaccines: heterologous, humoral, and mucosal immune responses protect against murine norovirus challenge

scientific article

Altering SARS coronavirus frameshift efficiency affects genomic and subgenomic RNA production

scientific article published on 18 January 2013

Amino acid substitutions in the S2 subunit of mouse hepatitis virus variant V51 encode determinants of host range expansion

scientific article

An Engineered Antibody with Broad Protective Efficacy in Murine Models of SARS and COVID-19

scientific article published on 17 November 2020

An Experimental Model for Myocarditis and Congestive Heart Failure after Rabbit Coronavirus Infection ⬇️

scientific article published on 01 January 1992

An Immunocompetent Mouse Model of Zika Virus Infection.

scientific article published in May 2018

An effective DNA vaccine platform for Middle East respiratory syndrome coronavirus

scientific article published on December 2016

An experimental model for dilated cardiomyopathy after rabbit coronavirus infection ⬇️

scientific article published on 01 November 1992

An orally bioavailable broad-spectrum antiviral inhibits SARS-CoV-2 and multiple endemic, epidemic and bat coronavirus

scientific article (preprint)

An orally bioavailable broad-spectrum antiviral inhibits SARS-CoV-2 in human airway epithelial cell cultures and multiple coronaviruses in mice

scientific article published on 06 April 2020

Analysis of Individuals from a Dengue-Endemic Region Helps Define the Footprint and Repertoire of Antibodies Targeting Dengue Virus 3 Type-Specific Epitopes

scientific article published on 19 September 2017

Analysis of intracellular small RNAs of mouse hepatitis virus: evidence for discontinuous transcription

scientific article

Analysis of intraviral protein-protein interactions of the SARS coronavirus ORFeome

scientific article

Analysis of murine hepatitis virus strain A59 temperature-sensitive mutant TS-LA6 suggests that nsp10 plays a critical role in polyprotein processing

scientific article

Analyzing the Human Serum Antibody Responses to a Live Attenuated Tetravalent Dengue Vaccine Candidate

article

Animal models and vaccines for SARS-CoV infection

scientific article published on 11 May 2007

Animal models for COVID-19

scientific article published on 23 September 2020

Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts

scientific article

Antagonism of dsRNA-Induced Innate Immune Pathways by NS4a and NS4b Accessory Proteins during MERS Coronavirus Infection

scholarly article by Courtney E Comar published in March 2019

Antibody is critical for the clearance of murine norovirus infection

scientific article published on 16 April 2008

Antibody potency, effector function and combinations in protection from SARS-CoV-2 infection in vivo

scientific article published on 15 September 2020

Antibody potency, effector function, and combinations in protection and therapy for SARS-CoV-2 infection in vivo

scientific article published on 01 March 2021

Antigen-Specific Adaptive Immunity to SARS-CoV-2 in Acute COVID-19 and Associations with Age and Disease Severity

scientific article published on 16 September 2020

Antigenic Variation of the Dengue Virus 2 Genotypes Impacts the Neutralization Activity of Human Antibodies in Vaccinees

scientific article published on 01 October 2020

Antigenic characterization of a novel recombinant GII.P16-GII.4 Sydney norovirus strain with minor sequence variation leading to antibody escape

scientific article published on 22 December 2017

Association between herpes simplex virus type 1 and Helicobacter pylori in US adolescents

scientific article

Attenuation and restoration of severe acute respiratory syndrome coronavirus mutant lacking 2'-o-methyltransferase activity

scientific article published on 29 January 2014

Author Correction: A SARS-like cluster of circulating bat coronaviruses shows potential for human emergence

scientific article published on 01 July 2020

Baseline T cell immune phenotypes predict virologic and disease control upon SARS-CoV infection

scientific article published on 21 September 2020

Bat Caliciviruses and Human Noroviruses Are Antigenically Similar and Have Overlapping Histo-Blood Group Antigen Binding Profiles.

scientific article

Bayesian Diallel Analysis Reveals Mx1-Dependent and Mx1-Independent Effects on Response to Influenza A Virus in Mice

scientific article published on 29 November 2017

Beyond Neutralizing Antibody Levels: The Epitope Specificity of Antibodies Induced by National Institutes of Health Monovalent Dengue Virus Vaccines.

scientific article

Bile Facilitates Human Norovirus Interactions with Diverse Histoblood Group Antigens, Compensating for Capsid Microvariation Observed in 2016-2017 GII.2 Strains

scientific article published on 05 September 2020

Binding of Norwalk virus-like particles to ABH histo-blood group antigens is blocked by antisera from infected human volunteers or experimentally vaccinated mice

scientific article

Broad blockade antibody responses in human volunteers after immunization with a multivalent norovirus VLP candidate vaccine: immunological analyses from a phase I clinical trial

scientific article

Broad neutralization of SARS-related viruses by human monoclonal antibodies

scientific article published on 15 June 2020

Broad sarbecovirus neutralizing antibodies define a key site of vulnerability on the SARS-CoV-2 spike protein

scientific article published on 16 May 2020

Broad spectrum antiviral remdesivir inhibits human endemic and zoonotic deltacoronaviruses with a highly divergent RNA dependent RNA polymerase

scientific article published in September 2019

Broad-spectrum Investigational Agent GS-5734 for the Treatment of Ebola, MERS Coronavirus and Other Pathogenic Viral Infections with High Outbreak Potential.

scientific article published on 4 October 2017

Broad-spectrum antiviral GS-5734 inhibits both epidemic and zoonotic coronaviruses.

scientific article

Bugs in the system

scientific article published on September 2013

CC002/Unc females are mouse models of exercise-induced paradoxical fat response.

scientific article published in June 2018

CD-loop extension in Zika virus envelope protein key for stability and pathogenesis

scientific article published on 8 September 2017

CD300lf is the primary physiologic receptor of murine norovirus but not human norovirus

scientific article published on 06 April 2020

Cell host response to infection with novel human coronavirus EMC predicts potential antivirals and important differences with SARS coronavirus

scientific article published on 30 April 2013

Cellular and humoral immunity following Snow Mountain virus challenge

scientific article

Characterization of a Pathogenic Full-Length cDNA Clone and Transmission Model for Porcine Epidemic Diarrhea Virus Strain PC22A

scientific article

Characterization of blockade antibody responses in GII.2.1976 Snow Mountain virus-infected subjects

scientific article published on 30 October 2013

Characterization of emerging GII.g/GII.12 noroviruses from a gastroenteritis outbreak in the United States in 2010

scientific article

Characterization of leader RNA sequences on the virion and mRNAs of mouse hepatitis virus, a cytoplasmic RNA virus ⬇️

scientific article published on June 1, 1984

Characterization of leader-related small RNAs in coronavirus-infected cells: further evidence for leader-primed mechanism of transcription

scientific article published on 01 July 1985

Characterization of replicative intermediate RNA of mouse hepatitis virus: presence of leader RNA sequences on nascent chains.

scientific article published on December 1983

Characterization of the homo- and heterotypic immune responses after natural norovirus infection

scientific article published on 01 November 2005

Chimeric GII.4 norovirus virus-like-particle-based vaccines induce broadly blocking immune responses

scientific article

Cleavage between replicase proteins p28 and p65 of mouse hepatitis virus is not required for virus replication

scientific article

Combination Attenuation Offers Strategy for Live Attenuated Coronavirus Vaccines

scholarly article by Vineet D. Menachery published in September 2018

Combination attenuation offers strategy for live-attenuated coronavirus vaccines

scholarly article published 28 April 2018

Comparative analysis of coronavirus genomic RNA structure reveals conservation in SARS-like coronaviruses

scientific article published on 16 June 2020

Comparative pathogenesis of three human and zoonotic SARS-CoV strains in cynomolgus macaques

scientific article

Comparative therapeutic efficacy of remdesivir and combination lopinavir, ritonavir, and interferon beta against MERS-CoV

scientific article published on 10 January 2020

Complement Activation Contributes to Severe Acute Respiratory Syndrome Coronavirus Pathogenesis

article

Complex Genetic Architecture Underlies Regulation of Influenza-A-Virus-Specific Antibody Responses in the Collaborative Cross

scientific article published on 01 April 2020

Conformational Occlusion of Blockade Antibody Epitopes, a Novel Mechanism of GII.4 Human Norovirus Immune Evasion

scientific article published in January 2018

Congenital Zika virus infection as a silent pathology with loss of neurogenic output in the fetal brain

scientific article

Consensus summary report for CEPI/BC March 12-13, 2020 meeting: Assessment of risk of disease enhancement with COVID-19 vaccines

scientific article published on 25 May 2020

Content and Performance of the MiniMUGA Genotyping Array, a New Tool To Improve Rigor and Reproducibility in Mouse Research

scientific article published on 16 October 2020

Coronavirus Host Range Expansion and Middle East Respiratory Syndrome Coronavirus Emergence: Biochemical Mechanisms and Evolutionary Perspectives

scientific article published on 7 August 2015

Coronavirus Susceptibility to the Antiviral Remdesivir (GS-5734) Is Mediated by the Viral Polymerase and the Proofreading Exoribonuclease.

scientific article

Coronavirus non-structural protein 16: evasion, attenuation, and possible treatments

scientific article

Coronaviruses: an RNA proofreading machine regulates replication fidelity and diversity

scientific article

Correction: In-Depth Analysis of the Antibody Response of Individuals Exposed to Primary Dengue Virus Infection

Correction: SARS Coronavirus 3b Accessory Protein Modulates Transcriptional Activity of RUNX1b.

scientific article published on 7 March 2012

Correction: Vaccine Efficacy in Senescent Mice Challenged with Recombinant SARS-CoV Bearing Epidemic and Zoonotic Spike Variants.

scientific article published on 27 February 2007

Corrigendum to "Each of the eight simian hemorrhagic fever virus minor structural proteins is functionally important" [Virology 462-463 (2014) 351-362].

scientific article published on 10 August 2014

Corrigendum to ''Longitudinal analysis of acute and convalescent B cell responses in a human primary dengue serotype 2 infection model'' [EBioMedicine 41 (2019) 465-478]

scientific article published on 03 April 2020

Cross-reactive coronavirus antibodies with diverse epitope specificities and extra-neutralization functions

scientific article published on 20 December 2020

Cryo-EM and antisense targeting of the 28-kDa frameshift stimulation element from the SARS-CoV-2 RNA genome

scientific article

Cryo-electron Microscopy and Exploratory Antisense Targeting of the 28-kDa Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome

scientific article published on 20 July 2020

Crystal Structure of the Receptor-Binding Domain from Newly Emerged Middle East Respiratory Syndrome Coronavirus

scientific article

Culturing the unculturable: human coronavirus HKU1 infects, replicates, and produces progeny virions in human ciliated airway epithelial cell cultures

scientific article

Cynomolgus macaque as an animal model for severe acute respiratory syndrome

scientific article

Cytokine systems approach demonstrates differences in innate and pro-inflammatory host responses between genetically distinct MERS-CoV isolates

scientific article published on 22 December 2014

DNA vaccine protection against SARS-CoV-2 in rhesus macaques

scientific article published on 20 May 2020

De novo design of ACE2 protein decoys to neutralize SARS-CoV-2

scientific article published on 03 August 2020

De novo design of potent and resilient hACE2 decoys to neutralize SARS-CoV-2

scientific article published on 05 November 2020

Defining the risk of SARS-CoV-2 variants on immune protection

scientific article published on 31 March 2022

Deletion of a 197-Amino-Acid Region in the N-Terminal Domain of Spike Protein Attenuates Porcine Epidemic Diarrhea Virus in Piglets

scientific article published on 10 May 2017

Deletion of the SARS-CoV-2 Spike Cytoplasmic Tail Increases Infectivity in Pseudovirus Neutralization Assays

scholarly article by Jingyou Yu published in May 2021

Dengue virus envelope protein domain I/II hinge determines long-lived serotype-specific dengue immunity

scientific article published on 02 January 2014

Dengue virus envelope protein domain I/II hinge: a key target for dengue virus vaccine design?

scientific article published on 24 September 2014

Detection of enteroviruses in shellfish by fluorogenic polymerase chain reaction integrated with 96-well microplate scanning

scientific article published on 01 September 2002

Developing therapeutic approaches for twenty-first-century emerging infectious viral diseases

scientific article published in March 2021

Development and characterization of a reverse genetic system for studying dengue virus serotype 3 strain variation and neutralization

scientific article

Development of a Broadly Accessible Venezuelan Equine Encephalitis Virus Replicon Particle Vaccine Platform.

scientific article published on 14 March 2018

Diallel analysis reveals Mx1-dependent and Mx1-independent effects on response to influenza A virus in mice

Dissecting Antibodies Induced by a Chimeric Yellow Fever-Dengue, Live-Attenuated, Tetravalent Dengue Vaccine (CYD-TDV) in Naive and Dengue-Exposed Individuals.

scientific article published on 08 December 2016

Dissecting strategies to tune the therapeutic potential of SARS-CoV-2–specific monoclonal antibody CR3022

scientific article published in 2021

Disulfide stabilization of human norovirus GI.1 virus-like particles focuses immune response toward blockade epitopes

scientific article published on 14 December 2020

ECG changes after rabbit coronavirus infection

scientific article published on 01 January 1999

Each of the eight simian hemorrhagic fever virus minor structural proteins is functionally important

scientific article

Early Upregulation of Acute Respiratory Distress Syndrome-Associated Cytokines Promotes Lethal Disease in an Aged-Mouse Model of Severe Acute Respiratory Syndrome Coronavirus Infection

scientific article (publication date: July 2009)

Early Upregulation of Acute Respiratory Distress Syndrome-Associated Cytokines Promotes Lethal Disease in an Aged-Mouse Model of Severe Acute Respiratory Syndrome Coronavirus Infection.

scientific article published in September 2009

Echocardiographic changes following rabbit coronavirus infection

scientific article published on 01 January 1995

Effect of mutations in the mouse hepatitis virus 3'(+)42 protein binding element on RNA replication

scientific article

Effects of human anti-spike protein receptor binding domain antibodies on severe acute respiratory syndrome coronavirus neutralization escape and fitness

scientific article

Efficient Reverse Genetic Systems for Rapid Genetic Manipulation of Emergent and Preemergent Infectious Coronaviruses

scientific article published on January 2017

Electrocardiographic changes following rabbit coronavirus-induced myocarditis and dilated cardiomyopathy

scientific article published on 01 January 1993

Elicitation of Potent Neutralizing Antibody Responses by Designed Protein Nanoparticle Vaccines for SARS-CoV-2

scientific article published on 31 October 2020

Elicitation of potent neutralizing antibody responses by designed protein nanoparticle vaccines for SARS-CoV-2

scientific article published on 12 August 2020

Emergence of Novel Human Norovirus GII.17 Strains Correlates with Changes in Blockade Antibody Epitopes

scientific article published on 3 August 2017

Emergence of a Highly Fit SARS-CoV-2 Variant

scientific article published on 16 December 2020

Emergence of a norovirus GII.4 strain correlates with changes in evolving blockade epitopes

scientific article

Emergence of new pandemic GII.4 Sydney norovirus strain correlates with escape from herd immunity

scientific article

Emerging human coronaviruses--disease potential and preparedness

Envelope protein glycosylation mediates Zika virus pathogenesis

scientific article published on 29 May 2019

Epigenetic Landscape during Coronavirus Infection

scientific article published on 15 February 2017

Episodic evolution mediates interspecies transfer of a murine coronavirus

scientific article

Epitope Addition and Ablation via Manipulation of a Dengue Virus Serotype 1 Infectious Clone

scientific article published on January 2017

Erratum: Corrigendum: A SARS-like cluster of circulating bat coronaviruses shows potential for human emergence

scientific article published on 01 April 2016

Escape from human monoclonal antibody neutralization affects in vitro and in vivo fitness of severe acute respiratory syndrome coronavirus

scientific article

Establishing a genetic recombination map for murine coronavirus strain A59 complementation groups

scientific article published on 01 August 1990

Evaluation of SARS-CoV-2 neutralization assays for antibody monitoring in natural infection and vaccine trials

scientific article published on 08 December 2020

Evaluation of a recombination-resistant coronavirus as a broadly applicable, rapidly implementable vaccine platform

Evaluation of serologic and antigenic relationships between middle eastern respiratory syndrome coronavirus and other coronaviruses to develop vaccine platforms for the rapid response to emerging coronaviruses

scientific article

Evaluation of the mRNA-1273 Vaccine against SARS-CoV-2 in Nonhuman Primates

scientific article published on 28 July 2020

Evidence for new transcriptional units encoded at the 3' end of the mouse hepatitis virus genome

scientific article published on September 1993

Evidence supporting a zoonotic origin of human coronavirus strain NL63

scientific article (publication date: December 2012)

Evidence that MHV subgenomic negative strands are functional templates.

scientific article published on January 1995

Evolution and persistence mechanisms of mouse hepatitis virus.

scientific article published on January 1995

Expanded subgenomic mRNA transcriptome and coding capacity of a nidovirus

scientific article

Expression and self-assembly of norwalk virus capsid protein from venezuelan equine encephalitis virus replicons

scientific article

Expression quantitative trait Loci for extreme host response to influenza a in pre-collaborative cross mice

scientific article published on February 2012

Ex vivo and in vivo suppression of SARS-CoV-2 with combinatorial AAV/RNAi expression vectors

scientific article published in 2022

Function of a 5'-end genomic RNA mutation that evolves during persistent mouse hepatitis virus infection in vitro

scientific article published in December 1995

Functional Transplant of a Dengue Virus Serotype 3 (DENV3)-Specific Human Monoclonal Antibody Epitope into DENV1.

scientific article published on 9 March 2016

Further Evidence for Bats as the Evolutionary Source of Middle East Respiratory Syndrome Coronavirus

scientific article published on 4 April 2017

GII.4 Human Norovirus: Surveying the Antigenic Landscape

scholarly article by Michael L Mallory et al published 20 February 2019 in Viruses

Genetic Variation between Dengue Virus Type 4 Strains Impacts Human Antibody Binding and Neutralization

scientific article published on 01 October 2018

Genetic analysis of complex traits in the emerging Collaborative Cross

scientific article

Genetic mapping of a highly variable norovirus GII.4 blockade epitope: potential role in escape from human herd immunity

scientific article published on 16 November 2011

Genetics of mouse hepatitis virus transcription: identification of cistrons which may function in positive and negative strand RNA synthesis

scientific article published on August 1990

Genome Wide Identification of SARS-CoV Susceptibility Loci Using the Collaborative Cross

scientific article published on 9 October 2015

Genomewide CRISPR knockout screen identified PLAC8 as an essential factor for SADS-CoVs infection

scientific article published on 27 April 2022

Genomic RNA Elements Drive Phase Separation of the SARS-CoV-2 Nucleocapsid

scientific article published on 27 November 2020

Genomic profiling of collaborative cross founder mice infected with respiratory viruses reveals novel transcripts and infection-related strain-specific gene and isoform expression

scientific article

Giving the Genes a Shuffle: Using Natural Variation to Understand Host Genetic Contributions to Viral Infections

article

Glycosylation of mouse DPP4 plays a role in inhibiting Middle East respiratory syndrome coronavirus infection

scientific article published on 4 February 2015

Herd immunity to GII.4 noroviruses is supported by outbreak patient sera

scientific article

Heterologous gene expression from transmissible gastroenteritis virus replicon particles

scientific article

Heterotypic humoral and cellular immune responses following Norwalk virus infection

scientific article

High Potency of a Bivalent Human VH Domain in SARS-CoV-2 Animal Models

scientific article published on 04 September 2020

High recombination and mutation rates in mouse hepatitis virus suggest that coronaviruses may be potentially important emerging viruses.

scientific article published on January 1995

High-Density Amplicon Sequencing Identifies Community Spread and Ongoing Evolution of SARS-CoV-2 in the Southern United States

scientific article published on 20 October 2020

Host genetic diversity enables Ebola hemorrhagic fever pathogenesis and resistance

scientific article

Human Coronavirus HKU1 Spike Protein Uses O-Acetylated Sialic Acid as an Attachment Receptor Determinant and Employs Hemagglutinin-Esterase Protein as a Receptor-Destroying Enzyme

scientific article published on 29 April 2015

Human Coronaviruses and other Respiratory Infections in Young Adults on a University Campus: Prevalence, Symptoms, and Shedding.

scientific article

Human Lung Stem Cell-Based Alveolospheres Provide Insights into SARS-CoV-2-Mediated Interferon Responses and Pneumocyte Dysfunction

scientific article published on 21 October 2020

Human Norovirus Histo-Blood Group Antigen (HBGA) Binding Sites Mediate the Virus Specific Interactions with Lettuce Carbohydrates

scientific article published on 08 September 2019

Human biliary glycoproteins function as receptors for interspecies transfer of mouse hepatitis virus

scientific article published on January 1998

Human dengue virus serotype 2 neutralizing antibodies target two distinct quaternary epitopes.

scientific article

Human norovirus detection and production, quantification, and storage of virus-like particles

scientific article

Human norovirus epitope D plasticity allows escape from antibody immunity without loss of capacity for binding cellular ligands

scholarly article by Lisa C Lindesmith et al published 24 October 2018 in Journal of Virology

Human susceptibility and resistance to Norwalk virus infection

scientific article (publication date: May 2003)

Humanized mice develop coronavirus respiratory disease

scientific article

Identification of cross-reactive norovirus CD4+ T cell epitopes

scientific article

Identification of human neutralizing antibodies against MERS-CoV and their role in virus adaptive evolution

scientific article

Identification of human neutralizing antibodies that bind to complex epitopes on dengue virions

scientific article

Identifying protective host gene expression signatures within the spleen during West Nile virus infection in the collaborative cross model

scientific article (publication date: December 2016)

Immune Predictors of Mortality After Ribonucleic Acid Virus Infection

scientific article published on 01 March 2020

Immune mechanisms responsible for vaccination against and clearance of mucosal and lymphatic norovirus infection

scientific article

Immunogenetic mechanisms driving norovirus GII.4 antigenic variation

scientific article

Impact of Pre-exposure History and Host Genetics on Antibody Avidity Following Norovirus Vaccination

scientific article

Improved quality control processing of peptide-centric LC-MS proteomics data

scientific article

In Vitro Assembly and Stabilization of Dengue and Zika Virus Envelope Protein Homo-Dimers

scientific article

In-depth analysis of the antibody response of individuals exposed to primary dengue virus infection

scientific article

Increased antibody affinity confers broad in vitro protection against escape mutants of severe acute respiratory syndrome coronavirus

scientific article

Increasing the translation of mouse models of MERS coronavirus pathogenesis through kinetic hematological analysis

scientific article published in 2019

Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing

scientific article

Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection

scientific article published on 15 November 2011

Interactions between coronavirus nucleocapsid protein and viral RNAs: implications for viral transcription

scientific article published on November 1988

Investigate the origins of COVID-19

scientific article

Is regulation preventing the development of therapeutics that may prevent future coronavirus pandemics?

scientific article published on 21 February 2018

Jumping species-a mechanism for coronavirus persistence and survival

scientific article

LY-CoV555, a rapidly isolated potent neutralizing antibody, provides protection in a non-human primate model of SARS-CoV-2 infection

scientific article published on 01 October 2020

Lack of Durable Cross-Neutralizing Antibodies Against Zika Virus from Dengue Virus Infection

scientific article (publication date: May 2017)

Longitudinal analysis of acute and convalescent B cell responses in a human primary dengue serotype 2 infection model

article

Lysosomal Proteases Are a Determinant of Coronavirus Tropism

scientific article published on 27 November 2018

MERS-CoV Accessory ORFs Play Key Role for Infection and Pathogenesis

scientific article published on 22 August 2017

MERS-CoV NSP16 necessary for IFN resistance and viral pathogenesis

MERS-CoV and H5N1 influenza virus antagonize antigen presentation by altering the epigenetic landscape

scientific article published on 16 January 2018

MHV subgenomic negative strand function.

scientific article

MHV-A59 ORF1a replicase protein nsp7-nsp10 processing in replication

scientific article published on 01 January 2006

MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses

scientific article published on 10 May 2016

MPLEx: a method for simultaneous pathogen inactivation and extraction of samples for multi-omics profiling

scientific article published on 16 January 2017

Mapping the Human Memory B Cell and Serum Neutralizing Antibody Responses to DENV4 Infection and Vaccination

scientific article (publication date: 28 December 2016)

Maternally Acquired Zika Antibodies Enhance Dengue Disease Severity in Mice

article

Mechanisms of GII.4 norovirus persistence in human populations

scientific article

Mechanisms of severe acute respiratory syndrome coronavirus-induced acute lung injury

scientific article published on 06 August 2013

Mechanisms of severe acute respiratory syndrome pathogenesis and innate immunomodulation

scientific article

Mechanisms of zoonotic severe acute respiratory syndrome coronavirus host range expansion in human airway epithelium

scientific article

Middle East Respiratory Syndrome Coronavirus NS4b Protein Inhibits Host RNase L Activation.

scientific article published on 29 March 2016

Middle East Respiratory Syndrome Coronavirus Nonstructural Protein 16 Is Necessary for Interferon Resistance and Viral Pathogenesis

scientific article published on 15 November 2017

Middle East respiratory syndrome coronavirus (MERS-CoV): announcement of the Coronavirus Study Group

scientific article

Modeling host genetic regulation of influenza pathogenesis in the collaborative cross

scientific article (publication date: February 2013)

Modeling pathogenesis of emergent and pre-emergent human coronaviruses in mice

Molecular anatomy of mouse hepatitis virus persistence: coevolution of increased host cell resistance and virus virulence

scientific article published in June 1996

Molecular determinants of severe acute respiratory syndrome coronavirus pathogenesis and virulence in young and aged mouse models of human disease

scientific article published on 9 November 2011

Molecular pathology of emerging coronavirus infections

scientific article

Molecular surveillance of enterovirus and norwalk-like virus in oysters relocated to a municipal-sewage-impacted gulf estuary

scientific article published on December 2003

Monoclonal antibody-based antigenic mapping of norovirus GII.4-2002.

scientific article

Mouse dipeptidyl peptidase 4 is not a functional receptor for Middle East respiratory syndrome coronavirus infection

scientific article

Mucin 4 Protects Female Mice from Coronavirus Pathogenesis

scientific article

Multi-omic network signatures of disease.

scientific article published on 07 January 2014

Multivalent norovirus vaccines induce strong mucosal and systemic blocking antibodies against multiple strains

scientific article published on 18 April 2006

Murine coronavirus temperature sensitive mutants.

scientific article published on January 1990

Murine hepatitis virus replicase protein nsp10 is a critical regulator of viral RNA synthesis

scientific article published on 28 March 2007

Mutational analysis of MHV-A59 replicase protein-nsp10.

scientific article published on January 2006

Mutations in the SARS-CoV-2 RNA dependent RNA polymerase confer resistance to remdesivir by distinct mechanisms

scientific article published on 28 April 2022

MyD88 is required for protection from lethal infection with a mouse-adapted SARS-CoV.

scientific article

Natural Strain Variation and Antibody Neutralization of Dengue Serotype 3 Viruses

scientific article (publication date: 19 March 2010)

Neutralization mechanism of a highly potent antibody against Zika virus

scientific article

New Metrics for Evaluating Viral Respiratory Pathogenesis

scientific article published on 26 June 2015

Newcastle disease virus (NDV) expressing the spike protein of SARS-CoV-2 as a live virus vaccine candidate

scientific article published on 21 November 2020

Newcastle disease virus (NDV) expressing the spike protein of SARS-CoV-2 as vaccine candidate

scientific article published on 26 July 2020

Next-Generation High-Throughput Functional Annotation of Microbial Genomes

scientific article (publication date: 4 October 2016)

Non-Hodgkin lymphoma (NHL) subtypes defined by common translocations: utility of fluorescence in situ hybridization (FISH) in a case-control study

scientific article

Norovirus GII.4 strain antigenic variation ⬇️

scientific article published on October 27, 2010

Norovirus capture with histo-blood group antigens reveals novel virus-ligand interactions

scientific article published on March 2004

Norovirus immunity and the great escape

scientific article published in 2012

Norovirus infectivity in humans and persistence in water

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Norovirus pathogenesis: mechanisms of persistence and immune evasion in human populations

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Norwalk virus: how infectious is it?

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Novel influenza virus NS1 antagonists block replication and restore innate immune function

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Novel modulators of p53-signaling encoded by unknown genes of emerging viruses

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Particle conformation regulates antibody access to a conserved GII.4 norovirus blockade epitope

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Pathogenesis of SARS-CoV-2 in transgenic mice expressing human angiotensin-converting enzyme 2

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Pathogenic influenza viruses and coronaviruses utilize similar and contrasting approaches to control interferon-stimulated gene responses.

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Pathways of cross-species transmission of synthetically reconstructed zoonotic severe acute respiratory syndrome coronavirus

scientific article published on 25 June 2008

Permissivity of Dipeptidyl Peptidase 4 Orthologs to Middle East Respiratory Syndrome Coronavirus Is Governed by Glycosylation and Other Complex Determinants

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Persistent infection promotes cross-species transmissibility of mouse hepatitis virus

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Persistent replication of severe acute respiratory syndrome coronavirus in human tubular kidney cells selects for adaptive mutations in the membrane protein.

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Possibility for reverse zoonotic transmission of SARS-CoV-2 to free-ranging wildlife: A case study of bats

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Potent cross-reactive neutralization of SARS coronavirus isolates by human monoclonal antibodies

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Potent neutralization of SARS-CoV-2 by human antibody heavy-chain variable domains isolated from a large library with a new stable scaffold

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Potent neutralization of SARS-CoV-2 in vitro and in an animal model by a human monoclonal antibody

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Potently neutralizing and protective human antibodies against SARS-CoV-2

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Potently neutralizing human antibodies that block SARS-CoV-2 receptor binding and protect animals

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Preadaptation of pandemic GII.4 noroviruses in unsampled virus reservoirs years before emergence

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Precision mouse models with expanded tropism for human pathogens

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Presence of leader sequences in the mRNA of mouse hepatitis virus ⬇️

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Prevalent, protective, and convergent IgG recognition of SARS-CoV-2 non-RBD spike epitopes

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Prevalent, protective, and convergent IgG recognition of SARS-CoV-2 non-RBD spike epitopes in COVID-19 convalescent plasma

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Processing of open reading frame 1a replicase proteins nsp7 to nsp10 in murine hepatitis virus strain A59 replication

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Production and Clinical Evaluation of Norwalk GI.1 Virus Lot 001-09NV in Norovirus Vaccine Development

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Progenitor identification and SARS-CoV-2 infection in human distal lung organoids

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Progenitor identification and SARS-CoV-2 infection in long-term human distal lung organoid cultures

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Prophylactic and postexposure efficacy of a potent human monoclonal antibody against MERS coronavirus

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Protein co-expression network analysis (ProCoNA).

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RNA dimerization plays a role in ribosomal frameshifting of the SARS coronavirus.

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RNA populations in immunocompromised patients as reservoirs for novel norovirus variants

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Rabbit dilated cardiomyopathy

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Rapid generation of a mouse model for Middle East respiratory syndrome

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Rapid isolation and profiling of a diverse panel of human monoclonal antibodies targeting the SARS-CoV-2 spike protein

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Rapid isolation and profiling of a diverse panel of human monoclonal antibodies targeting the SARS-CoV-2 spike protein

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Receptor Recognition by the Novel Coronavirus from Wuhan: an Analysis Based on Decade-Long Structural Studies of SARS Coronavirus

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Receptor homologue scanning functions in the maintenance of MHV-A59 persistence in vitro

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Receptor usage and cell entry of bat coronavirus HKU4 provide insight into bat-to-human transmission of MERS coronavirus

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Recombination between nonsegmented RNA genomes of murine coronaviruses

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Recombination, reservoirs, and the modular spike: mechanisms of coronavirus cross-species transmission

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Release of severe acute respiratory syndrome coronavirus nuclear import block enhances host transcription in human lung cells

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Remdesivir Inhibits SARS-CoV-2 in Human Lung Cells and Chimeric SARS-CoV Expressing the SARS-CoV-2 RNA Polymerase in Mice

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Remdesivir potently inhibits SARS-CoV-2 in human lung cells and chimeric SARS-CoV expressing the SARS-CoV-2 RNA polymerase in mice

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Renilla luciferase as a reporter to assess SARS-CoV mRNA transcription regulation and efficacy of anti-SARS-CoV agents

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Reply to "Statins may decrease the Fatality Rate of MERS Infection".

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Repurposing the Ebola and Marburg Virus Inhibitors Tilorone, Quinacrine and Pyronaridine: In vitro Activity Against SARS-CoV-2 and Potential Mechanisms

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Requirement for host transcription in the replication of Sindbis virus

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Resolution of diarrhea in an immunocompromised patient with chronic norovirus gastroenteritis correlates with constitution of specific antibody blockade titer

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Resurrection of an "extinct" SARS-CoV isolate GD03 from late 2003

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Reverse genetic analysis of the transcription regulatory sequence of the coronavirus transmissible gastroenteritis virus

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Reverse genetics with a full-length infectious cDNA of severe acute respiratory syndrome coronavirus

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Reverse genetics with a full-length infectious cDNA of the Middle East respiratory syndrome coronavirus

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Rewiring the severe acute respiratory syndrome coronavirus (SARS-CoV) transcription circuit: engineering a recombination-resistant genome

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Role of Zika Virus Envelope Protein Domain III as a Target of Human Neutralizing Antibodies

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SARS CoV replication and pathogenesis in human airway epithelial cultures.

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SARS coronavirus 3b accessory protein modulates transcriptional activity of RUNX1b

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SARS coronavirus accessory ORFs encode luxury functions

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SARS coronavirus and innate immunity

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SARS coronavirus pathogenesis: host innate immune responses and viral antagonism of interferon

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SARS coronavirus vaccine development

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SARS-CoV and emergent coronaviruses: viral determinants of interspecies transmission

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SARS-CoV pathogenesis is regulated by a STAT1 dependent but a type I, II and III interferon receptor independent mechanism

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SARS-CoV-2 D614G Variant Exhibits Enhanced Replication ex vivo and Earlier Transmission in vivo

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SARS-CoV-2 D614G variant exhibits efficient replication ex vivo and transmission in vivo

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SARS-CoV-2 Reverse Genetics Reveals a Variable Infection Gradient in the Respiratory Tract

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SARS-CoV-2 infection is effectively treated and prevented by EIDD-2801

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SARS-CoV-2 infection protects against rechallenge in rhesus macaques

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SARS-CoV-2 mRNA Vaccine Development Enabled by Prototype Pathogen Preparedness

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SARS-CoV-2 mRNA vaccine design enabled by prototype pathogen preparedness

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SARS-CoV-2: Combating Coronavirus Emergence

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SARS-CoV: Lessons for global health

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SARS-Like Coronavirus WIV1-CoV Does Not Replicate in Egyptian Fruit Bats ()

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SARS-like WIV1-CoV poised for human emergence

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STAT5: a Target of Antagonism by Neurotropic Flaviviruses

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Safety and Immunogenicity of SARS-CoV-2 mRNA-1273 Vaccine in Older Adults

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Saracatinib Inhibits Middle East Respiratory Syndrome-Coronavirus Replication In Vitro.

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Sera Antibody Repertoire Analyses Reveal Mechanisms of Broad and Pandemic Strain Neutralizing Responses after Human Norovirus Vaccination

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Serum Immunoglobulin A Cross-Strain Blockade of Human Noroviruses

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Severe Acute Respiratory Syndrome Coronavirus nsp9 Dimerization Is Essential for Efficient Viral Growth

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Severe acute respiratory syndrome coronavirus ORF6 antagonizes STAT1 function by sequestering nuclear import factors on the rough endoplasmic reticulum/Golgi membrane

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Severe acute respiratory syndrome coronavirus evades antiviral signaling: role of nsp1 and rational design of an attenuated strain

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Severe acute respiratory syndrome coronavirus group-specific open reading frames encode nonessential functions for replication in cell cultures and mice

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Severe acute respiratory syndrome coronavirus infection of human ciliated airway epithelia: role of ciliated cells in viral spread in the conducting airways of the lungs

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Severe acute respiratory syndrome coronavirus papain-like protease ubiquitin-like domain and catalytic domain regulate antagonism of IRF3 and NF-kappaB signaling

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Severe acute respiratory syndrome-related coronavirus: The species and its viruses – a statement of the Coronavirus Study Group

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Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

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Sindbis virus mutants selected for rapid growth in cell culture display attenuated virulence in animals

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Single-shot Ad26 vaccine protects against SARS-CoV-2 in rhesus macaques

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Small-Molecule Antiviral β-d--Hydroxycytidine Inhibits a Proofreading-Intact Coronavirus with a High Genetic Barrier to Resistance

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Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice

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Specific viral RNA drives the SARS CoV-2 nucleocapsid to phase separate

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Stopping pandemics before they start: Lessons learned from SARS-CoV-2

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Structural basis for potent cross-neutralizing human monoclonal antibody protection against lethal human and zoonotic severe acute respiratory syndrome coronavirus challenge

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Studies into the mechanism of MHV transcription

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Studies on the Mechanism of RNA Synthesis of a Murine Coronavirus ⬇️

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Subgenomic negative-strand RNA function during mouse hepatitis virus infection

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Successful vaccination strategies that protect aged mice from lethal challenge from influenza virus and heterologous severe acute respiratory syndrome coronavirus

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Synthetic recombinant bat SARS-like coronavirus is infectious in cultured cells and in mice

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Synthetic reconstruction of zoonotic and early human severe acute respiratory syndrome coronavirus isolates that produce fatal disease in aged mice

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Systematic assembly and genetic manipulation of the mouse hepatitis virus A59 genome

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Systematic assembly of a full-length infectious cDNA of mouse hepatitis virus strain A59.

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Systematic assembly of a full-length infectious clone of human coronavirus NL63

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Systemic, mucosal, and heterotypic immune induction in mice inoculated with Venezuelan equine encephalitis replicons expressing Norwalk virus-like particles

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Systems approaches to Coronavirus pathogenesis

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The Current and Future State of Vaccines, Antivirals and Gene Therapies Against Emerging Coronaviruses

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The Endonucleolytic RNA Cleavage Function of nsp1 of Middle East Respiratory Syndrome Coronavirus Promotes the Production of Infectious Virus Particles in Specific Human Cell Lines

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The Human Sodium Iodide Symporter as a Reporter Gene for Studying Middle East Respiratory Syndrome Coronavirus Pathogenesis

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The Molecular Specificity of the Human Antibody Response to Dengue Virus Infections

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The RBD Of The Spike Protein Of SARS-Group Coronaviruses Is A Highly Specific Target Of SARS-CoV-2 Antibodies But Not Other Pathogenic Human and Animal Coronavirus Antibodies

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The Role of EGFR in Influenza Pathogenicity: Multiple Network-Based Approaches to Identify a Key Regulator of Non-lethal Infections

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The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus

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The mechanism of differential neutralization of dengue serotype 3 strains by monoclonal antibody 8A1.

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The neutralizing antibody, LY-CoV555, protects against SARS-CoV-2 infection in nonhuman primates

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The nsp1, nsp13, and M proteins contribute to the hepatotropism of murine coronavirus JHM.WU.

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The nsp2 proteins of mouse hepatitis virus and SARS coronavirus are dispensable for viral replication

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The nsp2 replicase proteins of murine hepatitis virus and severe acute respiratory syndrome coronavirus are dispensable for viral replication

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The open reading frame 3a protein of severe acute respiratory syndrome-associated coronavirus promotes membrane rearrangement and cell death

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The receptor binding domain of the viral spike protein is an immunodominant and highly specific target of antibodies in SARS-CoV-2 patients

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The state of norovirus vaccines

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Toll-Like Receptor 3 Signaling via TRIF Contributes to a Protective Innate Immune Response to Severe Acute Respiratory Syndrome Coronavirus Infection

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Tracking the polyclonal neutralizing antibody response to a dengue virus serotype 1 type-specific epitope across two populations in Asia and the Americas

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Transcriptional profiles of WNV neurovirulence in a genetically diverse Collaborative Cross population

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Transcriptomic analysis reveals a mechanism for a prefibrotic phenotype in STAT1 knockout mice during severe acute respiratory syndrome coronavirus infection

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Transplantation of a quaternary structure neutralizing antibody epitope from dengue virus serotype 3 into serotype 4.

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Tropism of and innate immune responses to the novel human betacoronavirus lineage C virus in human ex vivo respiratory organ cultures

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Trypsin Treatment Unlocks Barrier for Zoonotic Bat Coronavirus Infection

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Trypsin treatment unlocks barrier for zoonotic coronaviruses infection

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Two Mutations Were Critical for Bat-to-Human Transmission of Middle East Respiratory Syndrome Coronavirus

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Unified feature association networks through integration of transcriptomic and proteomic data

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Unique signatures of long noncoding RNA expression in response to virus infection and altered innate immune signaling

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Vaccination-induced herd immunity: Successes and challenges

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Vaccine efficacy in senescent mice challenged with recombinant SARS-CoV bearing epidemic and zoonotic spike variants

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Vaccines to prevent severe acute respiratory syndrome coronavirus-induced disease

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Viral shape-shifting: norovirus evasion of the human immune system

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Virus-host interactions between non-secretors and human norovirus

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Virus-receptor interactions and interspecies transfer of a mouse hepatitis virus.

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What is the reservoir of emergent human norovirus strains?

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Within-host evolution results in antigenically distinct GII.4 noroviruses

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Yeast based small molecule screen for inhibitors of SARS-CoV

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Zika virus infection in Collaborative Cross mice

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Zn(2+) inhibits coronavirus and arterivirus RNA polymerase activity in vitro and zinc ionophores block the replication of these viruses in cell culture

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mRNA display design of fibronectin-based intrabodies that detect and inhibit severe acute respiratory syndrome coronavirus nucleocapsid protein

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β-d-N4-hydroxycytidine Inhibits SARS-CoV-2 Through Lethal Mutagenesis But Is Also Mutagenic To Mammalian Cells

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