List of works by Marc Stegger

A broad range quorum sensing inhibitor working through sRNA inhibition

scientific article

A universal primer-independent next-generation sequencing approach for investigations of norovirus outbreaks and novel variants

scientific article

Adaptation of Escherichia coli traversing from the faecal environment to the urinary tract.

scientific article published on 4 November 2016

An accessory wall teichoic acid glycosyltransferase protects Staphylococcus aureus from the lytic activity of Podoviridae

scientific article published on 24 November 2015

Bacterial content and characterization of antibiotic resistant Staphylococcus aureus in Danish sushi products and association with food inspector rankings

scientific article published on 03 June 2019

CHTyper, a Web Tool for Subtyping of Extraintestinal Pathogenic Escherichia coli based on the fumC and fimH Alleles

scientific article published on 7 February 2018

Characterisation of an IMP-7-producing ST357 Pseudomonas aeruginosa isolate detected in Denmark using whole genome sequencing

scientific article published on 29 November 2014

Characteristics of Escherichia coli causing persistence or relapse of urinary tract infections: phylogenetic groups, virulence factors and biofilm formation

scientific article published in November 2011

Characterization and transfer studies of macrolide resistance genes in Streptococcus pneumoniae from Denmark

scientific article published in August 2010

Cloning and occurrence of czrC, a gene conferring cadmium and zinc resistance in methicillin-resistant Staphylococcus aureus CC398 isolates

scientific article

Comparative genomics of Staphylococcus epidermidis from prosthetic-joint infections and nares highlights genetic traits associated with antimicrobial resistance, not virulence

scientific article published in 2021

Complete Genome Sequence of the Epidemic and Highly Virulent CTX-M-15-Producing H30-Rx Subclone of Escherichia coli ST131.

scientific article published on 5 December 2013

Complete Nucleotide Sequence of an Escherichia coli Sequence Type 410 Strain Carrying blaNDM-5 on an IncF Multidrug Resistance Plasmid and blaOXA-181 on an IncX3 Plasmid

scientific article published in February 2018

Corrigendum: Cross-Talk between Staphylococcus aureus and Other Staphylococcal Species via the agr Quorum Sensing System

scientific article published on 8 June 2017

Corrigendum: Cross-Talk between Staphylococcus aureus and Other Staphylococcal Species via the agr Quorum Sensing System

scientific article published on 5 October 2017

Cross-Talk between Staphylococcus aureus and Other Staphylococcal Species via the agr Quorum Sensing System

scientific article published on 8 November 2016

Demographic fluctuation of community-acquired antibiotic-resistant Staphylococcus aureus lineages: potential role of flimsy antibiotic exposure

scholarly article published 19 October 2017

Demographic fluctuation of community-acquired antibiotic-resistant Staphylococcus aureus lineages: potential role of flimsy antibiotic exposure.

scientific article published on 29 March 2018

Description and characterization of a penicillin-resistant Streptococcus dysgalactiae subsp. equisimilis clone isolated from blood in three epidemiologically linked patients

scientific article published on September 2016

Detection of mcr-1 encoding plasmid-mediated colistin-resistant Escherichia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015.

scientific article published on December 2015

Development of a Pefloxacin Disk Diffusion Method for Detection of Fluoroquinolone-Resistant Salmonella enterica

scientific article

Dissemination and Characteristics of a Novel Plasmid-Encoded Carbapenem-Hydrolyzing Class D β-Lactamase, OXA-436 from Four Patients Involving Six Different Hospitals in Denmark

scientific article published on 23 October 2017

Distinct clonal lineages and within-host diversification shape invasive Staphylococcus epidermidis populations

scientific article published on 05 February 2021

Diversity and Population Overlap between Avian and Human Escherichia coli Belonging to Sequence Type 95

scientific article published on 16 January 2019

Draft Genome Sequence of a Sequence Type 398 Methicillin-Resistant Staphylococcus aureus Isolate from a Danish Dairy Cow with Mastitis

scientific article

Draft Genome Sequences of Two Avian Pathogenic Escherichia coli Strains of Clinical Importance, E44 and E51.

scientific article published on 4 August 2016

Drivers and Dynamics of Methicillin-Resistant Livestock-Associated Staphylococcus aureus CC398 in Pigs and Humans in Denmark

scientific article published on 13 November 2018

Dynamics of the Human Nasal Microbiota and Staphylococcus aureus CC398 Carriage in Pig Truck Drivers across One Workweek

scientific article published on 26 August 2021

Emergence and characterization of community-associated methicillin-resistant Staphyloccocus aureus infections in Denmark, 1999 to 2006.

scientific article published on 29 October 2008

Emergence of Enteroaggregative Escherichia coli within the ST131 Lineage as a Cause of Extraintestinal Infections

scientific article published on 19 May 2020

Emergence of enteroaggregative Escherichia coli within the ST131 lineage as a cause of extraintestinal infections

Emergence of livestock-associated methicillin-resistant Staphylococcus aureus bloodstream infections in Denmark

scientific article published on 30 May 2017

Emergence of methicillin resistance predates the clinical use of antibiotics

scientific article published on 05 January 2022

Emergence of vanA Enterococcus faecium in Denmark, 2005-15.

scientific article published on 25 May 2017

Epidemiological characterisation of the first 785 SARS-CoV-2 Omicron variant cases in Denmark, December 2021

Epidemiology of European community-associated methicillin-resistant Staphylococcus aureus clonal complex 80 type IV strains isolated in Denmark from 1993 to 2004

scientific article

Epidemiology of methicillin-resistant Staphylococcus aureus carrying the novel mecC gene in Denmark corroborates a zoonotic reservoir with transmission to humans

scientific article published on 19 October 2012

Escherichia coli Causing Recurrent Urinary Tract Infections: Comparison to Non-Recurrent Isolates and Genomic Adaptation in Recurrent Infections

scientific article published in 2021

Escherichia coli ST131-22 as a Foodborne Uropathogen

scientific article published on 28 August 2018

Escherichia coli ST410 among humans and the environment in Southeast Asia

scientific article published on 07 June 2019

Evaluating coverage bias in next-generation sequencing of Escherichia coli

scientific article published on 24 June 2021

Evidence for Human Adaptation and Foodborne Transmission of Livestock-Associated Methicillin-Resistant Staphylococcus aureus

scientific article published on 20 September 2016

Evolution and Population Dynamics of Clonal Complex 152 Community-Associated Methicillin-Resistant Staphylococcus aureus

scientific article published on 01 July 2020

Extended-spectrum β-lactamase (ESBL) in Danish clinical isolates of Escherichia coli and Klebsiella pneumoniae: prevalence, β-lactamase distribution, phylogroups, and co-resistance.

scientific article

Fluoroquinolone Resistance Mechanisms in Urinary Tract Pathogenic Escherichia coli Isolated During Rapidly Increasing Fluoroquinolone Consumption in a Low-Use Country

scientific article published on 13 June 2011

Genetic diversity in CC398 methicillin-resistant Staphylococcus aureus isolates of different geographical origin

scientific article published on 21 July 2009

Genetic variability in beta-defensins is not associated with susceptibility to Staphylococcus aureus bacteremia

scientific article

Genome Sequence of Staphylococcus aureus Strain CA-347, a USA600 Methicillin-Resistant Isolate

scientific article published on 25 July 2013

Genome analysis of Clostridium perfringens isolates from healthy and necrotic enteritis infected chickens and turkeys

scientific article published on 11 July 2017

Genome analysis of Staphylococcus aureus ST291, a double locus variant of ST398, reveals a distinct genetic lineage

scientific article

Genome investigations show host adaptation and transmission of LA-MRSA CC398 from pigs into Danish healthcare institutions

scientific article published on 09 December 2019

Genome sequence of Staphylococcus aureus strain 11819-97, an ST80-IV European community-acquired methicillin-resistant isolate

scientific article published on March 2012

Genome-wide association studies reveal candidate genes associated to bacteraemia caused by ST93-IV CA-MRSA

scientific article published on 05 June 2021

Genomic analysis reveals different mechanisms of fusidic acid resistance in Staphylococcus aureus from Danish atopic dermatitis patients

scientific article published on 14 December 2017

Genomic characterization, phylogenetic analysis, and identification of virulence factors in Aerococcus sanguinicola and Aerococcus urinae strains isolated from infection episodes

scientific article

Genomic investigation of Staphylococcus aureus isolates from bulk tank milk and dairy cows with clinical mastitis.

scientific article published on 9 January 2018

Genomic investigation of a suspected outbreak of Legionella pneumophila ST82 reveals undetected heterogeneity by the present gold-standard methods, Denmark, July to November 2014

scientific article

Genomic relatedness of Staphylococcus pettenkoferi isolates of different origins

scientific article published on May 2017

High Prevalence of USA300 Among Clinical Isolates of Methicillin-Resistant Staphylococcus aureus on St. Kitts and Nevis, West Indies

scientific article published on 05 June 2019

Household transmission of SARS-CoV-2 Omicron variant of concern subvariants BA.1 and BA.2 in Denmark

scientific article published in 2022

Human β-defensin 3 (DEFB103) and its influence on Staphylococcus aureus nasal carriage

Identification of a PVL-negative SCCmec-IVa sublineage of the methicillin-resistant Staphylococcus aureus CC80 lineage: understanding the clonal origin of CA-MRSA.

scientific article

Implications of foraging and interspecies interactions on carriage of Escherichia coli resistant to critically important antimicrobials in birds

scientific article published on 14 August 2020

In Vivo Selection of a Unique Tandem Repeat Mediated Azole Resistance Mechanism (TR) in Aspergillus fumigatus cyp51A, Denmark

scholarly article by Rasmus Hare Jensen et al published March 2019 in Emerging Infectious Diseases

Influence of host genetics and environment on nasal carriage of staphylococcus aureus in danish middle-aged and elderly twins

scientific article

Intermingled Klebsiella pneumoniae Populations Between Retail Meats and Human Urinary Tract Infections

scientific article published on 22 July 2015

Investigation of a possible outbreak of NDM-5-producing ST16 Klebsiella pneumoniae among patients in Denmark with no history of recent travel using whole-genome sequencing

scientific article published on 29 June 2015

Investigation of a possible outbreak of carbapenem-resistant Acinetobacter baumannii in Odense, Denmark using PFGE, MLST and whole-genome-based SNPs

scientific article published on 19 March 2015

LA-MRSA CC398 in Dairy Cattle and Veal Calf Farms Indicates Spillover From Pig Production

scientific article published on 26 November 2019

Livestock-Associated MRSA CC1 in Norway; Introduction to Pig Farms, Zoonotic Transmission, and Eradication

article

Livestock-Associated Methicillin Resistant and Methicillin Susceptible Staphylococcus aureus Sequence Type (CC)1 in European Farmed Animals: High Genetic Relatedness of Isolates from Italian Cattle Herds and Humans

scientific article (publication date: 2015)

Livestock-associated methicillin and multidrug resistant Staphylococcus aureus is present among industrial, not antibiotic-free livestock operation workers in North Carolina

scientific article (publication date: 2013)

Mapping the Evolution of Hypervirulent Klebsiella pneumoniae

scientific article published on 21 July 2015

Methicillin-Resistant Staphylococcus aureus CC398 in Humans and Pigs in Norway: A "One Health" Perspective on Introduction and Transmission

scientific article published on 11 August 2016

Meticillin-resistant Staphylococcus aureus CC398 is an increasing cause of disease in people with no livestock contact in Denmark, 1999 to 2011

scientific article published on September 2015

Microarray-based detection of extended virulence and antimicrobial resistance gene profiles in phylogroup B2 Escherichia coli of human, meat and animal origin.

scientific article published on 26 May 2011

Mitochondrial DNA Levels in Fat and Blood Cells from Patients with Lipodystrophy or Peripheral Neuropathy and the Effect of 90 Days of High-Dose Coenzyme Q Treatment: A Randomized, Double-Blind, Placebo-Controlled Pilot Study

scientific article published on 12 October 2004

Molecular Epidemiology of Penicillin-Susceptible Staphylococcus aureus Bacteremia in Australia and Reliability of Diagnostic Phenotypic Susceptibility Methods to Detect Penicillin Susceptibility

scientific article published in 2022

Molecular characterisation of the clonal emergence of high-level ciprofloxacin-monoresistant Haemophilus influenzae in the Region of Southern Denmark

scientific article published on 21 January 2016

Molecular characterization of spa type t127, sequence type 1 methicillin-resistant Staphylococcus aureus from pigs.

scientific article

Multidrug-resistant tuberculosis: rapid detection of resistance to rifampin and high or low levels of isoniazid in clinical specimens and isolates

scientific article published on 5 June 2008

Mycobacterium arosiense sp. nov., a slowly growing, scotochromogenic species causing osteomyelitis in an immunocompromised child

scientific article

Non-toxigenic tox gene-bearing Corynebacterium ulcerans in a traumatic ulcer from a human case and his asymptomatic dog.

scientific article published on 15 August 2015

Novel SCCmec type XIII (9A) identified in an ST152 methicillin-resistant Staphylococcus aureus.

scientific article published on 19 March 2018

Novel mcr-3 variant, encoding mobile colistin resistance, in an ST131 Escherichia coli isolate from bloodstream infection, Denmark, 2014.

scientific article published on August 2017

Novel mcr-3 variant, encoding mobile colistin resistance, in an ST131 Escherichia coli isolate from bloodstream infection, Denmark, 2014.

scientific article published in August 2017

One Health Genomic Study of Human and Animal Klebsiella pneumoniae Isolated at Diagnostic Laboratories on a Small Caribbean Island

scientific article published on 31 December 2021

Origin and evolution of European community-acquired methicillin-resistant Staphylococcus aureus

scientific article

Origin, evolution, and global transmission of community-acquired Staphylococcus aureus ST8.

scientific article published on 20 November 2017

Polyclonal spread of vanA Enterococcus faecium in Central Denmark Region, 2009-2013, investigated using PFGE, MLST and WGS.

scientific article published on 28 September 2016

Rapid PCR detection of Staphylococcus aureus clonal complex 398 by targeting the restriction-modification system carrying sau1-hsdS1.

scientific article

Rapid detection, differentiation and typing of methicillin-resistant Staphylococcus aureus harbouring either mecA or the new mecA homologue mecALGA251

scientific article published on 01 April 2012

Rapid differentiation between livestock-associated and livestock-independent Staphylococcus aureus CC398 clades

scientific article

ReadFilter - Filtering reads of interest for quicker downstream analysis

Real-time relative qPCR without reference to control samples and estimation of run-specific PCR parameters from run-internal mini-standard curves

scientific article

Report of mecC-carrying MRSA in domestic swine

scientific article published on 20 September 2016

Resistance to critically important antimicrobials in Australian silver gulls (Chroicocephalus novaehollandiae) and evidence of anthropogenic origins

scientific article published on 01 September 2019

Retrospective detection of methicillin resistant and susceptible Staphylococcus aureus ST398 in Danish slaughter pigs

scientific article published on 27 March 2007

Risk factors for Staphylococcus aureus nasal colonization in Danish middle-aged and elderly twins.

scientific article published on 09 May 2013

SCCmecFinder, a Web-Based Tool for Typing of Staphylococcal Cassette Chromosome mec in Staphylococcus aureus Using Whole-Genome Sequence Data.

scientific article published in January 2018

ST131 fimH22 Escherichia coli isolate with a blaCMY-2/IncI1/ST12 plasmid obtained from a patient with bloodstream infection: highly similar to E. coli isolates of broiler origin

scientific article published on 01 March 2019

Same Organism, Different Phenotype - Are Phenotypic Criteria Adequate In Coagulase-Negative Staphylococcal Orthopaedic Implant-Associated Infections?

Selection of unique Escherichia coli clones by random amplified polymorphic DNA (RAPD): Evaluation by whole genome sequencing

scientific article

Sepsis, Endocarditis, and Purulent Arthritis due to a Rare Zoonotic Infection with Subspecies

scientific article published on 14 June 2018

Sequence Type 410 Is Causing New International High-Risk Clones

article by Louise Roer et al published 18 July 2018 in mSphere

Spa type distribution in Staphylococcus aureus originating from pigs, cattle and poultry

scientific article published on 26 September 2009

Spread of avian pathogenic Escherichia coli ST117 O78:H4 in Nordic broiler production

scientific article

Staphylococcus aureus CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock

article

Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock

scientific article published on 21 February 2012

Staphylococcus aureus and the ecology of the nasal microbiome

scientific article

Staphylococcus aureus isolates from nares of orthopaedic patients in Sweden are mupirocin susceptible

scientific article published on 15 April 2019

Staphylococcus aureus mutants lacking cell wall-bound protein A found in isolates from bacteraemia, MRSA infection and a healthy nasal carrier

scientific article published on 10 January 2013

Staphylococcus lugdunensis: antimicrobial susceptibility and optimal treatment options

scientific article published on 29 May 2019

Tandem repeat sequence analysis of staphylococcal protein A (spa) gene in methicillin-resistant Staphylococcus pseudintermedius

scientific article

The Epidome - a species-specific approach to assess the population structure and heterogeneity of Staphylococcus epidermidis colonization and infection

scientific article published on 26 November 2020

The epidemic of extended-spectrum-β-lactamase-producing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx

scientific article published on 17 December 2013

Turn Up the Heat-Food and Clinical Escherichia coli Isolates Feature Two Transferrable Loci of Heat Resistance

scientific article published on 7 April 2017

Two distinct clones of methicillin-resistant Staphylococcus aureus (MRSA) with the same USA300 pulsed-field gel electrophoresis profile: a potential pitfall for identification of USA300 community-associated MRSA.

scientific article published on 16 September 2009

Use of WGS data for investigation of a long-term NDM-1-producing Citrobacter freundii outbreak and secondary in vivo spread of blaNDM-1 to Escherichia coli, Klebsiella pneumoniae and Klebsiella oxytoca

scientific article

Use of whole-genome sequencing for detection of the spread of VIM-4-producing Escherichia coli between two patients in Denmark

scientific article published on 22 December 2014

Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus

scientific article published on 10 July 2015

WGS-based surveillance of third-generation cephalosporin-resistant Escherichia coli from bloodstream infections in Denmark

scientific article published on 22 March 2017

Whole genome sequencing identifies zoonotic transmission of MRSA isolates with the novel mecA homologue mecC

scientific article

Whole-Genome Analysis of Recurrent Staphylococcus aureus t571/ST398 Infection in Farmer, Iowa, USA.

scientific article published in January 2018

Whole-genome comparison of urinary pathogenic Escherichia coli and faecal isolates of UTI patients and healthy controls

scientific article published on 14 September 2017

Whole-genome sequencing of bloodstream Staphylococcus aureus isolates does not distinguish bacteraemia from endocarditis

scientific article published in November 2017

spa typing directly from a mecA, spa and pvl multiplex PCR assay-a cost-effective improvement for methicillin-resistant Staphylococcus aureus surveillance

scientific article published on 3 April 2008

spa typing of methicillin-resistant Staphylococcus aureus isolated from domestic animals and veterinary staff in the UK and Ireland

article

Paulina is supported by:

About Paulina

Help