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List of works by Calum E MacAulay

A comprehensive analysis of common copy-number variations in the human genome

scientific article published on 5 December 2006

A framework for quantitative assessment of Ki67 distribution in preneoplastic bronchial epithelial lesions

scientific article published in June 2012

A randomized phase IIb trial of anethole dithiolethione in smokers with bronchial dysplasia

scientific article published in July 2002

A sequence-based approach to identify reference genes for gene expression analysis

scientific article

A statistical model for removing inter-device differences in spectroscopy

scientific article

A stepwise framework for the normalization of array CGH data

scientific article

Abstract A21: MiR-106a and miR-106b affect growth and metastasis of lung adenocarcinoma

Abstract LB-346: A novel lung tumor suppressor implicated in somatic and familial cancers

Accuracy of optical spectroscopy for the detection of cervical intraepithelial neoplasia without colposcopic tissue information; a step toward automation for low resource settings

scientific article

Accuracy of optical spectroscopy for the detection of cervical intraepithelial neoplasia: Testing a device as an adjunct to colposcopy

scientific article

An astronomically calibrated stratigraphy of the Cenomanian, Turonian and earliest Coniacian from the Cretaceous Western Interior Seaway, USA: Implications for global chronostratigraphy

scientific article published in 2015

An in silico platform for the study of epithelial pre-invasive neoplastic development

scientific article published on 22 July 2010

Automated image analysis of digital colposcopy for the detection of cervical neoplasia

scientific article

Automated sputum cytometry for detection of intraepithelial neoplasias in the lung

Calibration standards for multicenter clinical trials of fluorescence spectroscopy for in vivo diagnosis

scientific article published in January 2006

Canadian Optically-guided approach for Oral Lesions Surgical (COOLS) trial: study protocol for a randomized controlled trial

scientific article

Chromosome 5p aberrations are early events in lung cancer: implication of glial cell line-derived neurotrophic factor in disease progression

scientific article

Comment re: a comparison of DNA copy number profiling platforms

scientific article published in May 2008

Comparative Cancer Epigenomics

Comprehensive serial analysis of gene expression of the cervical transcriptome

scientific article

Computer-aided diagnostics in digital pathology

scientific article published in June 2017

Cytometric features of cell nuclei of adenocarcinoma in situ and invasive adenocarcinoma of the cervix

scientific article published on December 2002

DNA ploidy compared with human papilloma virus testing (Hybrid Capture II) and conventional cervical cytology as a primary screening test for cervical high-grade lesions and cancer in 1555 patients with biopsy confirmation

scientific article

DNA ploidy measured on archived pretreatment biopsy material may correlate with prostate-specific antigen recurrence after prostate brachytherapy

scientific article published on 18 May 2013

Design and preliminary analysis of a study to assess intra-device and inter-device variability of fluorescence spectroscopy instruments for detecting cervical neoplasia

scientific article published on 26 September 2005

Detection of precancerous lesions in the oral cavity using oblique polarized reflectance spectroscopy: a clinical feasibility study

scientific article published in June 2017

Development of a fluorescence video endoscopy imaging system for the early detection of cancer in the gastrointestinal tract

Developmental transcription factor NFIB is a putative target of oncofetal miRNAs and is associated with tumour aggressiveness in lung adenocarcinoma

scientific article published on 30 June 2016

Diagnostic features in two-dimensional light scattering patterns of normal and dysplastic cervical cell nuclei

Direct fluorescence visualization of clinically occult high-risk oral premalignant disease using a simple hand-held device

scientific article published in January 2007

Disruption of the non-canonical WNT pathway in lung squamous cell carcinoma

scientific article published on April 2008

Divergent genomic and epigenomic landscapes of lung cancer subtypes underscore the selection of different oncogenic pathways during tumor development

scientific article

EZH2 promotes E2F-driven SCLC tumorigenesis through modulation of apoptosis and cell-cycle regulation

scientific article published on August 2013

Effect of active smoking on the human bronchial epithelium transcriptome

scientific article

Epigenomics: mapping the methylome

scientific article

Evaluation of HPV infection and smoking status impacts on cell proliferation in epithelial layers of cervical neoplasia

scientific article

Exploratory analysis of quantitative histopathology of cervical intraepithelial neoplasia: objectivity, reproducibility, malignancy-associated changes, and human papillomavirus

scientific article

FACADE: a fast and sensitive algorithm for the segmentation and calling of high resolution array CGH data

scientific article

Fluorescence Visualization-Guided Surgery for Early-Stage Oral Cancer

scientific article

Fluorescence and reflectance device variability throughout the progression of a phase II clinical trial to detect and screen for cervical neoplasia using a fiber optic probe

scientific article published in May 2007

Fluorescence confocal endomicroscopy of the cervix: pilot study on the potential and limitations for clinical implementation

scientific article published in December 2016

Fluorescence visualization detection of field alterations in tumor margins of oral cancer patients

scientific article published in November 2006

Gain of a region on 7p22.3, containing MAD1L1, is the most frequent event in small-cell lung cancer cell lines

scientific article published on January 2006

Genetic changes in the evolution of multidrug resistance for cultured human ovarian cancer cells

scientific article published on December 2007

Has fluorescence spectroscopy come of age? A case series of oral precancers and cancers using white light, fluorescent light at 405 nm, and reflected light at 545 nm using the Trimira Identafi 3000.

scientific article published in February 2012

High resolution analysis of non-small cell lung cancer cell lines by whole genome tiling path array CGH.

scientific article published on March 2006

High throughput image cytometry for detection of suspicious lesions in the oral cavity

scientific article published in August 2012

High-resolution chromosome arm 5p array CGH analysis of small cell lung carcinoma cell lines

article

Higher levels of the anti-inflammatory protein CC10 are associated with improvement in bronchial dysplasia and sputum cytometric assessment in individuals at high risk for lung cancer

scientific article published in March 2008

Human cancer long non-coding RNA transcriptomes

scientific article

Hyperspectral cell sociology reveals spatial tumor-immune cell interactions associated with lung cancer recurrence

scholarly article by Katey S S Enfield et al published 16 January 2019 in Journal for Immunotherapy of Cancer

Identification of novel lung genes in bronchial epithelium by serial analysis of gene expression

scientific article published on 29 June 2006

In vitro model for studying malignancy associated changes

scientific article published in January 2003

In vivo fluorescence spectroscopy of the gastrointestinal tract under multiple wavelength excitation

In vivo lung microvasculature visualized in three dimensions using fiber-optic color Doppler optical coherence tomography

scientific article

In vivo optical coherence tomography imaging of preinvasive bronchial lesions

scientific article

In vivo pathology: microendoscopy as a new endoscopic imaging modality

scientific article published in July 2004

Increase of sensitivity of sputum cytology using high-resolution image cytometry: field study results

scientific article published in June 2002

Innovative molecular and imaging approaches for the detection of lung cancer and its precursor lesions

scientific article

Instrumentation as a source of variability in the application of fluorescence spectroscopic devices for detecting cervical neoplasia

scientific article published in May 2007

Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer

scientific article

Integrative genomic analyses identify BRF2 as a novel lineage-specific oncogene in lung squamous cell carcinoma

scientific article

Involvement of multiple developmental genes on chromosome 1p in lung tumorigenesis

scientific article published on 22 December 2004

Key issues in lung cancer chemoprevention trials of new agents

scientific article

Large-area sub-pixel resolution imaging using a spatial light modulator

Lung adenocarcinoma of never smokers and smokers harbor differential regions of genetic alteration and exhibit different levels of genomic instability

scientific article

MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data

scientific article

Methodology of a real-time quality control for the multispectral digital colposcope (MDC).

scientific article

Model-based analysis of reflectance and fluorescence spectra for in vivo detection of cervical dysplasia and cancer

scientific article

Molecular fixative enables expression microarray analysis of microdissected clinical cervical specimens

scientific article published on 08 January 2014

Monitoring photoproduct formation and photobleaching by fluorescence spectroscopy has the potential to improve PDT dosimetry with a verteporfin-like photosensitizer

scientific article

Multi-scale system biology applied to cervical inter-epithelial neoplasia

scientific article published on 14 September 2007

Multicenter clinical trials of in vivo fluorescence: are the measurements equivalent?

Multispectral digital colposcopy for in vivo detection of cervical cancer

scientific article

Multispectral digital microscopy for in vivo monitoring of oral neoplasia in the hamster cheek pouch model of carcinogenesis

scientific article

Natural history of bronchial preinvasive lesions

scientific article

Natural history of cervical intraepithelial neoplasia: a meta-analysis

scientific article published in July 2005

Nuclear morphometry as a biomarker for bronchial intraepithelial neoplasia: correlation with genetic damage and cancer development

scientific article

Numerical analysis of dysplasia-associated changes in depth-dependent light scattering profile of cervical epithelium

Numerical investigation of two-dimensional light scattering patterns of cervical cell nuclei to map dysplastic changes at different epithelial depths

scientific article published on 15 January 2014

Oncogene mutations, copy number gains and mutant allele specific imbalance (MASI) frequently occur together in tumor cells

scientific article

Optical technologies and molecular imaging for cervical neoplasia: a program project update

scientific article published on 22 September 2011

Optical technologies for cervical neoplasia: update of an NCI program project grant

scientific article

Optimal excitation wavelengths for discrimination of cervical neoplasia

scientific article published on October 2002

Oral cancer screening in a high-risk underserved community--Vancouver Downtown Eastside

scientific article

Oral fluorescence imaging using 405-nm excitation, aiding the discrimination of cancers and precancers by identifying changes in collagen and elastic breakdown and neovascularization in the underlying stroma

scientific article published in February 2012

P2.01-024 Expression of miR-106 Paralogs Improves Prognostic Value of Mesenchymal Signatures but Only miR-106b Promotes Invasiveness

Patient-derived first generation xenografts of non-small cell lung cancers: promising tools for predicting drug responses for personalized chemotherapy

scientific article published on 23 February 2010

Physician attitudes toward dissemination of optical spectroscopy devices for cervical cancer control: an industrial-academic collaborative study

scientific article published on February 2012

Potential use of quantitative tissue phenotype to predict malignant risk for oral premalignant lesions

scientific article published on May 2008

Pre-profiling factors influencing serum microRNA levels

scientific article

Prediction using hierarchical data: Applications for automated detection of cervical cancer

scientific article

Quantification of confocal fluorescence microscopy for the detection of cervical intraepithelial neoplasia

scientific article

Quantification of large scale DNA organization for predicting prostate cancer recurrence

scientific article

Quantitative histopathology and chromosome 9 polysomy in a clinical trial of 4-HPR.

scientific article

Repeatability of tissue fluorescence measurements for the detection of cervical intraepithelial neoplasia

scientific article

Resolving the resolution of array CGH.

scientific article

Results of a pilot study of multispectral digital colposcopy for the in vivo detection of cervical intraepithelial neoplasia

scientific article

SIGMA2: a system for the integrative genomic multi-dimensional analysis of cancer genomes, epigenomes, and transcriptomes

scientific article

SIGMA: a system for integrative genomic microarray analysis of cancer genomes

scientific article

SeeGH--a software tool for visualization of whole genome array comparative genomic hybridization data

scientific article

Serial analysis of gene expression profiles of developmental stages in non-small cell lung carcinoma

scientific article

Sex and Smoking Status Effects on the Early Detection of Early Lung Cancer in High-Risk Smokers Using an Electronic Nose

scientific article

Sources of variability in fluorescence spectroscopic measurements in a Phase II clinical trial of 850 patients

scientific article published on 7 September 2007

Subvisual chromatin changes in cervical epithelium measured by texture image analysis and correlated with HPV.

scientific article published on 26 September 2005

Technologies supporting analytical cytology: clinical, research and drug discovery applications

scientific article

The clinical effectiveness of fluorescence and reflectance spectroscopy for the in vivo diagnosis of cervical neoplasia: an analysis by phase of trial design

scientific article published on 07 September 2007

The clinical effectiveness of optical spectroscopy for the in vivo diagnosis of cervical intraepithelial neoplasia: where are we?

scientific article published on October 2007

The performance of fluorescence and reflectance spectroscopy for the in vivo diagnosis of cervical neoplasia; point probe versus multispectral approaches

scientific article published on 07 September 2007

Tracing the "at-risk" oral mucosa field with autofluorescence: steps toward clinical impact

scientific article published on 28 April 2009

Transcriptome profiles of carcinoma-in-situ and invasive non-small cell lung cancer as revealed by SAGE

scientific article

Up regulation in gene expression of chromatin remodelling factors in cervical intraepithelial neoplasia

scientific article

Use of nuclear morphometry characteristics to distinguish between normal and abnormal cervical glandular histologies

scientific article published in January 2003

Using LongSAGE to Detect Biomarkers of Cervical Cancer Potentially Amenable to Optical Contrast Agent Labelling

scientific article

Validation of novel optical imaging technologies: the pathologists' view

scientific article published on September 2007

Whole genome tiling path array CGH analysis of segmental copy number alterations in cervical cancer cell lines

scientific article published on January 2007

p16 and MIB1 improve the sensitivity and specificity of the diagnosis of high grade squamous intraepithelial lesions: methodological issues in a report of 447 biopsies with consensus diagnosis and HPV HCII testing

scientific article published on 07 September 2007

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