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List of works by Matthias Wilm

"De novo" sequencing of peptides recovered from in-gel digested proteins by nanoelectrospray tandem mass spectrometry

scientific article published on 01 January 2002

A Polycomb group protein complex with sequence-specific DNA-binding and selective methyl-lysine-binding activities

scientific article published on 17 April 2006

A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP

scientific article

A compartmentalized phosphorylation/dephosphorylation system that regulates U snRNA export from the nucleus

scientific article published on 29 October 2007

A general precursor ion-like scanning mode on quadrupole-TOF instruments compatible with chromatographic separation.

scientific article

A generic protein purification method for protein complex characterization and proteome exploration

scientific article (publication date: October 1999)

A giant protease with potential to substitute for some functions of the proteasome

scientific article

A homologue of cysteine-rich secretory proteins induces premature degradation of vitelline envelopes and hatching of Xenopus laevis embryos

scientific article published in August 2003

A novel Rab5 GDP/GTP exchange factor complexed to Rabaptin-5 links nucleotide exchange to effector recruitment and function

scientific article (publication date: 19 September 1997)

A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site.

scientific article

A strategy for identifying gel-separated proteins in sequence databases by MS alone.

scientific article published on August 1996

A subset of human 35S U5 proteins, including Prp19, function prior to catalytic step 1 of splicing

scientific article

APPL proteins link Rab5 to nuclear signal transduction via an endosomal compartment

scientific article

Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling

scientific article published on July 2001

Activation of a novel calcium-dependent protein-tyrosine kinase. Correlation with c-Jun N-terminal kinase but not mitogen-activated protein kinase activation

scientific article

Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cells

scientific article

An efficient protein complex purification method for functional proteomics in higher eukaryotes

scientific article

An enzymatic cascade of Rab5 effectors regulates phosphoinositide turnover in the endocytic pathway

scientific article

Automatedde novo sequencing of proteins using the differential scanning technique ⬇️

scientific article published on May 1, 2001

Biochemical function of female-lethal (2)D/Wilms' tumor suppressor-1-associated proteins in alternative pre-mRNA splicing.

scientific article

Building the stator of the yeast vacuolar-ATPase: specific interaction between subunits E and G.

scientific article

Cdk11 is a RanGTP-dependent microtubule stabilization factor that regulates spindle assembly rate

scientific article

Characterization of novel SF3b and 17S U2 snRNP proteins, including a human Prp5p homologue and an SF3b DEAD-box protein

scientific article

Combination of peptide OFFGEL fractionation and label-free quantitation facilitated proteomics profiling of extraocular muscle

scholarly article by Sven Fraterman published in September 2007

Complexes between the nonsense-mediated mRNA decay pathway factor human upf1 (up-frameshift protein 1) and essential nonsense-mediated mRNA decay factors in HeLa cells

scientific article

Costimulation induced phosphorylation of L-plastin facilitates surface transport of the T cell activation molecules CD69 and CD25

scientific article

DMSO enhances electrospray response, boosting sensitivity of proteomic experiments

scientific article published on 25 August 2013

Dbp5, a DEAD-box protein required for mRNA export, is recruited to the cytoplasmic fibrils of nuclear pore complex via a conserved interaction with CAN/Nup159p

scientific article

Electrospray mass spectrometry for protein characterization

scientific article published on 01 June 1995

Erratum: Structural basis for activation of the titin kinase domain during myofibrillogenesis

scientific article published in Nature

Error-tolerant identification of peptides in sequence databases by peptide sequence tags

scientific article

Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry

scientific article (publication date: February 1996)

Geminin cleavage during apoptosis by caspase-3 alters its binding ability to the SWI/SNF subunit Brahma

scientific article published on 29 January 2007

Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster

scientific article published on 9 May 2004

Glucosylation of Rho proteins by Clostridium difficile toxin B.

scientific article

HURP is part of a Ran-dependent complex involved in spindle formation

scientific article (publication date: 18 April 2006)

Histone H2A deubiquitinase activity of the Polycomb repressive complex PR-DUB

scientific article

Hsp90 enables Ctf13p/Skp1p to nucleate the budding yeast kinetochore

scientific article

IRAG mediates NO/cGMP-dependent inhibition of platelet aggregation and thrombus formation

scientific article

Identification of 40LoVe, a Xenopus hnRNP D family protein involved in localizing a TGF-beta-related mRNA during oogenesis

scientific article (publication date: April 2005)

Importin alpha associates with membranes and participates in nuclear envelope assembly in vitro

scientific article

Legionella pneumophila glucosyltransferase inhibits host elongation factor 1A.

scholarly article

Linking genome and proteome by mass spectrometry: large-scale identification of yeast proteins from two dimensional gels

scientific article

Lipid Discovery by Combinatorial Screening and Untargeted LC-MS/MS.

scientific article published on 17 June 2016

Lysine and polyamines are substrates for transglutamination of Rho by the Bordetella dermonecrotic toxin

scientific article published on December 2001

MOF-regulated acetylation of MSL-3 in the Drosophila dosage compensation complex

scientific article published in May 2003

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

scientific article (publication date: March 1996)

Mass spectrometric analysis of nitric oxide-modified caspase-3

scientific article published on 01 July 1999

Matrix-assisted laser desorption/ionization directed nano-electrospray ionization tandem mass spectrometric analysis for protein identification

scientific article

Molecular cloning and N-terminal analysis of bovine cystatin C. Identification of a full-length N-terminal region

scientific article published in December 1997

Nano electrospray combined with a quadrupole ion trap for the analysis of peptides and protein digests

scientific article

Nanoelectrospray-based detection and sequencing of substoichiometric amounts of phosphopeptides in complex mixtures

scientific article published on 01 February 2003

New carbamate supports for the preparation of 3′-amino-modified oligonucleotides

scientific article published on 01 October 1996

Noise filtering techniques for electrospray quadrupole time of flight mass spectra

scientific article published on 01 July 2003

NuSAP, a mitotic RanGTP target that stabilizes and cross-links microtubules

scientific article

Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila

scientific article published on March 2006

Nup155 regulates nuclear envelope and nuclear pore complex formation in nematodes and vertebrates

scientific article

PHAX, a mediator of U snRNA nuclear export whose activity is regulated by phosphorylation

scientific journal article

Parent ion scans of unseparated peptide mixtures

scientific article published on 01 February 1996

Pcl-PRC2 is needed to generate high levels of H3-K27 trimethylation at Polycomb target genes

scientific article

Peptide sequencing by mass spectrometry for homology searches and cloning of genes

scientific article published on 01 July 1997

Phosphatidylinositol-3-OH kinases are Rab5 effectors.

scientific article

Phosphorylation and inactivation of BAD by mitochondria-anchored protein kinase A

scientific article published on 01 April 1999

Phosphorylation and structure-based functional studies reveal a positive and a negative role for the activation loop of the c-Abl tyrosine kinase.

scientific article published on December 2001

Preprocessing of tandem mass spectrometric data to support automatic protein identification

scientific article

Principles of Electrospray Ionization ⬇️

scientific article published on July 1, 2011

Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method

scientific article

Proteomic characterisation of neuronal sphingolipid-cholesterol microdomains: role in plasminogen activation

scientific journal article

Prothymosin alpha associates with the oncoprotein SET and is involved in chromatin decondensation

scientific article

Quantitative proteomics in biological research

scientific article published on October 2009

Quantitative proteomics profiling of sarcomere associated proteins in limb and extraocular muscle allotypes

scientific article published on 16 January 2007

RBM5/Luca-15/H37 regulates Fas alternative splice site pairing after exon definition.

scientific article

REF, an evolutionary conserved family of hnRNP-like proteins, interacts with TAP/Mex67p and participates in mRNA nuclear export.

scientific article

Rabenosyn-5, a novel Rab5 effector, is complexed with hVPS45 and recruited to endosomes through a FYVE finger domain

scientific article

RanGTP mediates nuclear pore complex assembly

scientific article

RanGTP-regulated interactions of CRM1 with nucleoporins and a shuttling DEAD-box helicase

scientific article

Regulation of intracellular calcium by a signalling complex of IRAG, IP3 receptor and cGMP kinase Ibeta

scientific article (publication date: 9 March 2000)

Reverse genetics in the mosquito Anopheles gambiae: targeted disruption of the Defensin gene

scientific article

Sex-lethal imparts a sex-specific function to UNR by recruiting it to the msl-2 mRNA 3' UTR: translational repression for dosage compensation

scientific article

Silicone/graphite coating for on-target desalting and improved peptide mapping performance of matrix-assisted laser desorption/ionization-mass spectrometry targets in proteomic experiments

scientific article published in April 2005

Small nuclear ribonucleoprotein remodeling during catalytic activation of the spliceosome

scientific article

Splicing factors stimulate polyadenylation via USEs at non-canonical 3' end formation signals

scientific article published on 6 June 2007

Structural basis for activation of the titin kinase domain during myofibrillogenesis

scientific article

Structural basis for targeting the chromatin repressor Sfmbt to Polycomb response elements

scientific article

TAP, the human homolog of Mex67p, mediates CTE-dependent RNA export from the nucleus

scientific article

TPX2, A novel xenopus MAP involved in spindle pole organization

scientific article

The C-terminal domain of TAP interacts with the nuclear pore complex and promotes export of specific CTE-bearing RNA substrates

scientific article

The DEXD/H-box RNA helicase RHII/Gu is a co-factor for c-Jun-activated transcription

scientific article

The Rab5 effector Rabankyrin-5 regulates and coordinates different endocytic mechanisms

scientific article

The S. cerevisiae SET3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program

scientific article

The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4

scientific article

The conserved Nup107-160 complex is critical for nuclear pore complex assembly

scientific article

The in vitro and in vivo phosphotyrosine map of activated MuSK.

scientific article published on April 2000

The modified base J is the target for a novel DNA-binding protein in kinetoplastid protozoans

scientific article

The p120 catenin partner Kaiso is a DNA methylation-dependent transcriptional repressor

scientific article

The sec14 homology module of neurofibromin binds cellular glycerophospholipids: mass spectrometry and structure of a lipid complex

scientific article

The tandem affinity purification (TAP) method: a general procedure of protein complex purification

scientific article (publication date: July 2001)

Translation initiation by the c-myc mRNA internal ribosome entry sequence and the poly(A) tail.

scientific article

Use of mass spectrometric methods for protein identification in receptor research.

scientific article

Vesicular stomatitis virus matrix protein inhibits host cell gene expression by targeting the nucleoporin Nup98

scientific article (publication date: November 2000)

mRNA silencing in erythroid differentiation: hnRNP K and hnRNP E1 regulate 15-lipoxygenase translation from the 3' end.

scientific article published on May 1997

p38 MAPK controls prothrombin expression by regulated RNA 3' end processing

scientific article

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