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List of works by Wojciech Karlowski

5SRNAdb: an information resource for 5S ribosomal RNAs

scientific article published on 20 October 2015

<scp>PEP444c</scp> encoded within the <scp><i>MIR444c</i></scp> gene regulates <scp>microRNA444c</scp> accumulation in barley

scientific article published in 2023

A Functional Network of Novel Barley MicroRNAs and Their Targets in Response to Drought

scientific article published on 29 April 2020

A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes.

scientific article

A stable tRNA-like molecule is generated from the long noncoding RNA GUT15 in Arabidopsis

scientific article published on 21 March 2018

Agos—a universal web tool for GW Argonaute-binding domain prediction ⬇️

scientific article published on March 8, 2011

Alignment-free sequence comparison: benefits, applications, and tools.

scientific article published on 3 October 2017

Analysis of OPCRIT results indicate the presence of a novel 'social functioning' domain and complex structure of other dimensions in the Wielkopolska (Poland) population.

scientific article published on 21 April 2012

Annotation and profiling of barley GLYCOGEN SYNTHASE3/Shaggy-like genes indicated shift in organ-preferential expression.

scientific article

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses

scientific article

Assessing the 5S ribosomal RNA heterogeneity in Arabidopsis thaliana using short RNA next generation sequencing data

scientific article

AthCNV: A Map of DNA Copy Number Variations in the Arabidopsis thaliana Genome

scientific article published on 07 April 2020

Benchmarking of alignment-free sequence comparison methods

Benchmarking of alignment-free sequence comparison methods

scientific article published on 25 July 2019

Biogenesis, conservation, and function of miRNA in liverworts

scientific article published on 16 July 2022

Comparative analysis of the receptor-like kinase family in Arabidopsis and rice

scientific article published on 22 April 2004

Comparative genomics of Lupinus angustifolius gene-rich regions: BAC library exploration, genetic mapping and cytogenetics.

scientific article

Comparison of rice and Arabidopsis annotation.

scientific article

Complex Regulation of Two Target Genes Encoding SPX-MFS Proteins by Rice miR827 in Response to Phosphate Starvation

article

Corrigendum: A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes

scientific article published on 11 October 2019

Defective XRN3-mediated transcription termination in Arabidopsis impacts expression of protein-coding genes

scientific article published on 21 January 2018

Developmental changes in barley microRNA expression profiles coupled with miRNA target analysis

scientific article published on 2 November 2016

Developmentally regulated expression and complex processing of barley pri-microRNAs

scientific article

Dual Role of the Histone Variant H2A.Z in Transcriptional Regulation of Stress-Response Genes

scientific article

Early origin and adaptive evolution of the GW182 protein family, the key component of RNA silencing in animals.

scientific article

Efficiency of PacBio long read correction by 2nd generation Illumina sequencing.

scientific article published on 18 December 2017

Expression of miRNAs involved in phosphate homeostasis and senescence is altered in glyphosate-treated maize

Genome-wide computational identification of WG/GW Argonaute-binding proteins in Arabidopsis

scientific article

Genomewide identification of genes involved in the potato response to drought indicates functional evolutionary conservation with Arabidopsis plants

scientific article published on 17 July 2017

Identification and Analysis of WG/GW ARGONAUTE-Binding Domains

scientific article published in January 2017

Identification of Structural Variants in Two Novel Genomes of Maize Inbred Lines Possibly Related to Glyphosate Tolerance

scientific article published on 18 April 2020

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.

scientific article

Integrative data analysis indicates an intrinsic disordered domain character of Argonaute-binding motifs

scientific article

Is Polymorphism in the Apoptosis and Inflammatory Pathway Genes Associated With a Primary Response to Anti-TNF Therapy in Crohn's Disease Patients?

scientific article published on 14 August 2020

Local Duplication of TIR-NBS-LRR Gene Marks Clubroot Resistance in <i>Brassica napus</i> cv. Tosca

scientific article published on 08 April 2021

MOsDB: an integrated information resource for rice genomics

scientific article

Maf1-mediated regulation of yeast RNA polymerase III is correlated with CCA addition at the 3' end of tRNA precursors

scientific article

NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis.

scientific article

Nicotine affects protein complex rearrangement in Caenorhabditis elegans cells

scientific article

Non-Canonical Processing of Arabidopsis pri-miR319a/b/c Generates Additional microRNAs to Target One RAP2.12 mRNA Isoform.

scientific article published on 19 March 2012

Novel genes specifically expressed during the development of the male thalli and antheridia in the dioecious liverwort Pellia endiviifolia.

scientific article published on 25 June 2011

ORCAN-a web-based meta-server for real-time detection and functional annotation of orthologs

scientific article published on 05 January 2017

Pathogen-regulated genes in wheat isogenic lines differing in resistance to brown rust Puccinia triticina

scientific article published on 5 October 2015

Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses

scientific article published on 09 March 2021

Promoter-based identification of novel non-coding RNAs reveals the presence of dicistronic snoRNA-miRNA genes in Arabidopsis thaliana.

scientific article

Quantitative Analysis of Plant miRNA Primary Transcripts

scientific article published on 01 January 2021

RNAcentral: a comprehensive database of non-coding RNA sequences

scientific article (publication date: 4 January 2017)

RNAcentral: a hub of information for non-coding RNA sequences

scientific article published on 5 November 2018

RNAcentral: a hub of information for non-coding RNA sequences

scholarly article published in Nucleic Acids Research

Remnants of the Legume Ancestral Genome Preserved in Gene-Rich Regions: Insights from Lupinus angustifolius Physical, Genetic, and Comparative Mapping

scientific article

START lipid/sterol-binding domains are amplified in plants and are predominantly associated with homeodomain transcription factors

scientific article

Sequence Dynamics of Pre-mRNA G-Quadruplexes in Plants

scientific article published on 27 June 2019

Sequence composition and genome organization of maize.

scholarly article

Silencing of HvGSK1.1-A GSK3/SHAGGY-Like Kinase-Enhances Barley (Hordeum vulgare L.) Growth in Normal and in Salt Stress Conditions

scientific article published on 10 September 2020

StarSeeker: an automated tool for mature duplex microRNA sequence identification based on secondary structure modeling of precursor molecule.

scientific article

TaWAK6 encoding wall-associated kinase is involved in wheat resistance to leaf rust similar to adult plant resistance

scientific article published on 13 January 2020

The identification of differentially expressed genes in male and female gametophytes of simple thalloid liverwort Pellia endiviifolia sp. B using an RNA-seq approach

scientific article published on 15 July 2020

The liverwort Pellia endiviifolia shares microtranscriptomic traits that are common to green algae and land plants

scientific article

The over-expression of an alfalfa RING-H2 gene induces pleiotropic effects on plant growth and development.

scientific article published in May 2003

The plant s1-like nuclease family has evolved a highly diverse range of catalytic capabilities.

scientific article published on 24 April 2013

Transcriptionally and post-transcriptionally regulated microRNAs in heat stress response in barley

scientific article published on 2 September 2014

mirEX 2.0 - an integrated environment for expression profiling of plant microRNAs

scientific article

mirEX: a platform for comparative exploration of plant pri-miRNA expression data

scientific article published on 19 October 2011

tRex: A Web Portal for Exploration of tRNA-Derived Fragments in Arabidopsis thaliana.

scientific article published on 14 November 2017

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