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List of works by Ulrike Kusebauch

A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis

scientific article

A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions

scientific article published on 8 September 2017

A high-stringency blueprint of the human proteome

scientific article published on 16 October 2020

A wellness study of 108 individuals using personal, dense, dynamic data clouds

scientific article published on 17 July 2017

ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry ⬇️

scientific article published on March 18, 2011

An assessment of current bioinformatic solutions for analyzing LC‐MS data acquired by selected reaction monitoring technology ⬇️

scientific article published on April 1, 2012

Building ProteomeTools based on a complete synthetic human proteome

scientific article

Comparative proteome analysis reveals conserved and specific adaptation patterns of Staphylococcus aureus after internalization by different types of human non-professional phagocytic host cells

scientific article

Conformational properties of 4-mercaptoproline and related derivatives

scientific article published in January 2008

DIALib-QC an assessment tool for spectral libraries in data-independent acquisition proteomics

scientific article published on 16 October 2020

Decreased Gap Width in a Cylindrical High-Field Asymmetric Waveform Ion Mobility Spectrometry Device Improves Protein Discovery

scientific article published on 11 November 2015

Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1.

scientific article

Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome

scientific article

Identification of Organ-Enriched Protein Biomarkers of Acute Liver Injury by Targeted Quantitative Proteomics of Blood in Acetaminophen- and Carbon-Tetrachloride-Treated Mouse Models and Acetaminophen Overdose Patients

scientific article published on 30 August 2016

Mycobacterium tuberculosis supports protein tyrosine phosphorylation

scientific article

N-glycoprotein SRMAtlas: a resource of mass spectrometric assays for N-glycosites enabling consistent and multiplexed protein quantification for clinical applications

scientific article

Oncogenic H-ras reprograms Madin-Darby canine kidney (MDCK) cell-derived exosomal proteins following epithelial-mesenchymal transition

scientific article published on 03 May 2013

Opening a SWATH Window on Posttranslational Modifications: Automated Pursuit of Modified Peptides

scientific article published on 24 December 2015

PASSEL: The PeptideAtlas SRMexperiment library ⬇️

scientific article published on April 1, 2012

Peptide Purification by Reversed-Phase Chromatography

Quantotypic properties of QconCAT peptides targeting bovine host response to Streptococcus uberis

scientific article published on 8 February 2012

RNA Sequencing Identifies Novel Translational Biomarkers of Kidney Fibrosis

scientific article published on 08 October 2015

Reproducible quantification of cancer-associated proteins in body fluids using targeted proteomics

scientific article

Selected reaction monitoring mass spectrometry of mastitis milk reveals pathogen-specific regulation of bovine host response proteins

scientific article published on 11 April 2018

State of the Human Proteome in 2014/2015 As Viewed through PeptideAtlas: Enhancing Accuracy and Coverage through the AtlasProphet

scientific article published on 3 July 2015

The 5300-year-old Helicobacter pylori genome of the Iceman

scientific article

The Iceman's Last Meal Consisted of Fat, Wild Meat, and Cereals

article

The Protein Information and Property Explorer 2: Gaggle‐like exploration of biological proteomic data within one webpage ⬇️

scientific article published on December 6, 2010

The microvesicle component of HIV-1 inocula modulates dendritic cell infection and maturation and enhances adhesion to and activation of T lymphocytes

scientific article (publication date: October 2013)

Using PeptideAtlas, SRMAtlas, and PASSEL: Comprehensive Resources for Discovery and Targeted Proteomics

scientific article

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