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List of works by Talima Pearson

A Bacillus anthracis Genome Sequence from the Sverdlovsk 1979 Autopsy Specimens

scientific article

A genomic survey of positive selection in Burkholderia pseudomallei provides insights into the evolution of accidental virulence

scientific article

A horizontal gene transfer event defines two distinct groups within Burkholderia pseudomallei that have dissimilar geographic distributions

scientific article

Accurate and rapid identification of the Burkholderia pseudomallei near-neighbour, Burkholderia ubonensis, using real-time PCR

scientific article

An attenuated strain of Bacillus anthracis (CDC 684) has a large chromosomal inversion and altered growth kinetics

scientific article

Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales

scientific article published in September 2004

Anthrax, but not Bacillus anthracis?

scientific article published in November 2006

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Bacillus anthracis in China and its relationship to worldwide lineages

scientific article

BurkDiff: a real-time PCR allelic discrimination assay for Burkholderia pseudomallei and B. mallei

scientific article

Burkholderia pseudomallei distribution in Australasia is linked to paleogeographic and anthropogenic history

scientific article published in PLoS ONE

Characterization of ceftazidime resistance mechanisms in clinical isolates of Burkholderia pseudomallei from Australia

scientific article

Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity.

scientific article published on 23 July 2018

Comparative phylogenomics and evolution of the Brucellae reveal a path to virulence

scientific article published on 13 December 2013

Comparison of TaqMan PCR assays for detection of the melioidosis agent Burkholderia pseudomallei in clinical specimens

scientific article

Complete Genome Sequence of the Environmental Burkholderia pseudomallei Sequence Type 131 Isolate MSHR1435, Associated with a Chronic Melioidosis Infection

scientific article published on 15 March 2018

Continuing evolution of Burkholderia mallei through genome reduction and large-scale rearrangements

scientific article

Cost-effective interrogation of single nucleotide polymorphisms using the mismatch amplification mutation assay and capillary electrophoresis

scientific article published on December 2010

Critical Knowledge Gaps in Our Understanding of Environmental Cycling and Transmission of Leptospira spp.

scientific article

Development and validation of Burkholderia pseudomallei-specific real-time PCR assays for clinical, environmental or forensic detection applications

scientific article

Development of ceftazidime resistance in an acute Burkholderia pseudomallei infection

scientific article published on 22 August 2012

Diversity of 16S-23S rDNA internal transcribed spacer (ITS) reveals phylogenetic relationships in Burkholderia pseudomallei and its near-neighbors

scientific article

Draft Genome Sequence of a Streptococcus suis Isolate from a Case of Cattle Meningitis

scientific article published on 07 May 2020

Draft Genome Sequence of the First Pathogenic Leptospira Isolates from Ecuador

scientific article published on 5 May 2016

Draft Genome Sequences of Historical Strains of Coxiella burnetii Isolated from Cow's Milk and a Goat Placenta

scientific article published on 28 September 2017

Educational Attainment and Staphylococcus aureus Colonization in a Hispanic Border Community: Testing Fundamental Cause Theory

scientific article published on 30 September 2020

Effects of ursodeoxycholic acid on the gut microbiome and colorectal adenoma development

scientific article published on 16 January 2019

Epidemiological tracking and population assignment of the non-clonal bacterium, Burkholderia pseudomallei

scientific article

Estimated herd prevalence and sequence types of Coxiella burnetii in bulk tank milk samples from commercial dairies in Indiana

scientific article published on 7 August 2015

False detection of Coxiella burnetii-what is the risk?

scientific article published on 7 April 2016

Fine-scale genetic diversity among Burkholderia pseudomallei soil isolates in northeast Thailand

scientific article

Francisella tularensis subsp. tularensis group A.I, United States

scientific article

Genome Sequence of Bacillus anthracis STI, a Sterne-Like Georgian/Soviet Vaccine Strain

scientific article

Genotyping and Axenic Growth of Coxiella burnetii Isolates Found in the United States Environment

scientific article

Genotyping of Brucella species using clade specific SNPs

scientific article

Genotyping of Burkholderia mallei from an outbreak of glanders in Bahrain suggests multiple introduction events ⬇️

scientific article

Genotyping of Coxiella burnetii from domestic ruminants and human in Hungary: indication of various genotypes

scientific article

Global genetic population structure of Bacillus anthracis

scientific article

Health Disparities in Staphylococcus aureus Transmission and Carriage in a Border Region of the United States Based on Cultural Differences in Social Relationships: Protocol for a Survey Study

scientific article published on 27 September 2019

High Leptospira Diversity in Animals and Humans Complicates the Search for Common Reservoirs of Human Disease in Rural Ecuador

scientific article

High prevalence and two dominant host-specific genotypes of Coxiella burnetii in U.S. milk

scientific article

Identification of melioidosis outbreak by multilocus variable number tandem repeat analysis

scientific article published on February 2009

Impact of Different Exercise Modalities on the Human Gut Microbiome

In vitro selection and characterization of Bacillus anthracis mutants with high-level resistance to ciprofloxacin

scientific article

KlebSeq, a Diagnostic Tool for Surveillance, Detection, and Monitoring of Klebsiella pneumoniae

scientific article published on 10 August 2016

Massive dispersal of Coxiella burnetii among cattle across the United States

scientific article published on 25 August 2016

Melt analysis of mismatch amplification mutation assays (Melt-MAMA): a functional study of a cost-effective SNP genotyping assay in bacterial models

scientific article published in 2012

Meta-analysis to estimate the load of Leptospira excreted in urine: beyond rats as important sources of transmission in low-income rural communities

scientific article

Microbial forensics: DNA fingerprinting of Bacillus anthracis (anthrax).

scientific article published on July 2008

Molecular epidemiologic investigation of an anthrax outbreak among heroin users, Europe

scientific article

Molecular epidemiology of anthrax cases associated with recreational use of animal hides and yarn in the United States

scientific article

Molecular epidemiology of glanders, Pakistan

scientific article

Molecular investigations of a locally acquired case of melioidosis in Southern AZ, USA

scientific article

Molecular phylogeny of Burkholderia pseudomallei from a remote region of Papua New Guinea

scientific article

Mutations, mutation rates, and evolution at the hypervariable VNTR loci of Yersinia pestis

scientific article published on 11 December 2006

Pathogen to commensal? Longitudinal within-host population dynamics, evolution, and adaptation during a chronic >16-year Burkholderia pseudomallei infection

scientific article published on 05 March 2020

Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing

scholarly article

Phylogenetic understanding of clonal populations in an era of whole genome sequencing

scientific article published on 27 May 2009

Phylogenetics of a Fungal Invasion: Origins and Widespread Dispersal of White-Nose Syndrome ⬇️

scientific article

Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer

scientific article

Phylogeography of Bacillus anthracis in the country of Georgia shows evidence of population structuring and is dissimilar to other regional genotypes

scientific article

Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia

scientific article

Phylogeography of Francisella tularensis: global expansion of a highly fit clone

scientific article published on 27 February 2009

Population genetics of Vibrio cholerae from Nepal in 2010: evidence on the origin of the Haitian outbreak

scientific article

Pre-Columbian origins for North American anthrax

scientific article

Predicting the current and future distribution of the western black-legged tick, Ixodes pacificus, across the Western US using citizen science collections

scientific article published on 05 January 2021

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Rapid typing of Coxiella burnetii

scientific article

Reply to "South Asia instead of Nepal may be the origin of the Haitian cholera outbreak strain".

scientific article published on November 2011

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

Selective whole genome amplification and sequencing of Coxiella burnetii directly from environmental samples

scientific article published on 31 October 2019

Single nucleotide polymorphism typing of Bacillus anthracis from Sverdlovsk tissue

scientific article published on April 2008

Staphylococcus aureus CC398: host adaptation and emergence of methicillin resistance in livestock

scientific article published on 21 February 2012

Strain-specific single-nucleotide polymorphism assays for the Bacillus anthracis Ames strain

scientific article published on 8 November 2006

Tandem repeat regions within the Burkholderia pseudomallei genome and their application for high resolution genotyping

scientific article

Texas isolates closely related to Bacillus anthracis Ames

scientific article published in September 2008

The Effects of Signal Erosion and Core Genome Reduction on the Identification of Diagnostic Markers

scientific article

The Mountain Meadows Massacre and "poisoned springs": scientific testing of the more recent, anthrax theory

scientific article (publication date: 2013)

The epidemic of extended-spectrum-β-lactamase-producing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx

scientific article published on 17 December 2013

Unexpected Relations of Historical Anthrax Strain.

scientific article published on 25 April 2017

Use of a real-time PCR TaqMan assay for rapid identification and differentiation of Burkholderia pseudomallei and Burkholderia mallei

scientific article

VNTR analysis of selected outbreaks of Burkholderia pseudomallei in Australia

scientific article published on 20 December 2006

When outgroups fail; phylogenomics of rooting the emerging pathogen, Coxiella burnetii

scientific article published on 4 June 2013

Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years

scientific article published on 6 October 2015

Whole genome sequence analysis of Cryptococcus gattii from the Pacific Northwest reveals unexpected diversity

scientific article

Whole-genome sequencing of Burkholderia pseudomallei isolates from an unusual melioidosis case identifies a polyclonal infection with the same multilocus sequence type

scientific article

Whole-genome-based phylogeny and divergence of the genus Brucella

scientific article published on 06 February 2009

Within-host evolution of Burkholderia pseudomallei in four cases of acute melioidosis

scientific article

Within-host evolution of Burkholderia pseudomallei over a twelve-year chronic carriage infection

scientific article published on 16 July 2013

Yersinia pestis and the plague of Justinian 541-543 AD: a genomic analysis.

scientific article

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