List of works - Ren Sun

A benchmark study on error-correction by read-pairing and tag-clustering in amplicon-based deep sequencing

scientific article published on 12 February 2016

A comprehensive biophysical description of pairwise epistasis throughout an entire protein domain

scientific article published on 16 October 2014

A comprehensive functional map of the hepatitis C virus genome provides a resource for probing viral proteins.

scientific article

A quantitative high-resolution genetic profile rapidly identifies sequence determinants of hepatitis C viral fitness and drug sensitivity

scientific article (publication date: April 2014)

Accurate viral population assembly from ultra-deep sequencing data

scientific article

Adaptation in protein fitness landscapes is facilitated by indirect paths

scientific article published on 08 July 2016

Adaptive potential of a drug-targeted viral protein as a function of environmental stress

Annotating Protein Functional Residues by Coupling High-Throughput Fitness Profile and Homologous-Structure Analysis

scientific article published on November 2016

Coupling high-throughput genetics with phylogenetic information reveals an epistatic interaction on the influenza A virus M segment

scientific article published on 12 January 2016

HIV-1 quasispecies delineation by tag linkage deep sequencing

scientific article

High-resolution genetic profile of viral genomes: why it matters

scientific article published on 08 September 2015

High-throughput identification of loss-of-function mutations for anti-interferon activity in the influenza A virus NS segment

scientific article

High-throughput identification of protein mutant stability computed from a double mutant fitness landscape

scientific article published on 5 November 2015

High-throughput profiling of influenza A virus hemagglutinin gene at single-nucleotide resolution

scientific article

High-throughput profiling of point mutations across the HIV-1 genome.

scientific article

Kaposi's sarcoma-associated herpesvirus ORF18 and ORF30 are essential for late gene expression during lytic replication

scientific article

Limiting Cholesterol Biosynthetic Flux Spontaneously Engages Type I IFN Signaling

scientific article published on 10 December 2015

Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants.

scientific article published on 30 November 2016

Modelling clinical data shows active tissue concentration of daclatasvir is 10-fold lower than its plasma concentration

scientific article

Quantifying perinatal transmission of Hepatitis B viral quasispecies by tag linkage deep sequencing

scientific article published on 31 August 2017

Short communication: HIV-1 gag genetic variation in a single acutely infected participant defined by high-resolution deep sequencing

scientific article published on 23 July 2014

Systematic Identification of H274Y Compensatory Mutations in Influenza A Virus Neuraminidase by High-Throughput Screening ⬇️

scientific article published on November 14, 2012

Systematic identification of anti-interferon function on hepatitis C virus genome reveals p7 as an immune evasion protein

scientific article

List of works by Ren Sun

A benchmark study on error-correction by read-pairing and tag-clustering in amplicon-based deep sequencing

A comprehensive biophysical description of pairwise epistasis throughout an entire protein domain

A comprehensive functional map of the hepatitis C virus genome provides a resource for probing viral proteins.

A quantitative high-resolution genetic profile rapidly identifies sequence determinants of hepatitis C viral fitness and drug sensitivity

Accurate viral population assembly from ultra-deep sequencing data

Adaptation in protein fitness landscapes is facilitated by indirect paths

Adaptive potential of a drug-targeted viral protein as a function of environmental stress

Annotating Protein Functional Residues by Coupling High-Throughput Fitness Profile and Homologous-Structure Analysis

Coupling high-throughput genetics with phylogenetic information reveals an epistatic interaction on the influenza A virus M segment

HIV-1 quasispecies delineation by tag linkage deep sequencing

High-resolution genetic profile of viral genomes: why it matters

High-throughput identification of loss-of-function mutations for anti-interferon activity in the influenza A virus NS segment

High-throughput identification of protein mutant stability computed from a double mutant fitness landscape

High-throughput profiling of influenza A virus hemagglutinin gene at single-nucleotide resolution

High-throughput profiling of point mutations across the HIV-1 genome.

Kaposi's sarcoma-associated herpesvirus ORF18 and ORF30 are essential for late gene expression during lytic replication

Limiting Cholesterol Biosynthetic Flux Spontaneously Engages Type I IFN Signaling

Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants.

Modelling clinical data shows active tissue concentration of daclatasvir is 10-fold lower than its plasma concentration

Quantifying perinatal transmission of Hepatitis B viral quasispecies by tag linkage deep sequencing

Short communication: HIV-1 gag genetic variation in a single acutely infected participant defined by high-resolution deep sequencing

Systematic Identification of H274Y Compensatory Mutations in Influenza A Virus Neuraminidase by High-Throughput Screening ⬇️

Systematic identification of anti-interferon function on hepatitis C virus genome reveals p7 as an immune evasion protein