List of works by Nico Jehmlich

25-Hydroxyvitamin D3 Synthesis by Enzymatic Steroid Side-Chain Hydroxylation with Water.

scientific article

A Peroxygenase from Chaetomium globosum Catalyzes the Selective Oxygenation of Testosterone

scientific article published on 19 January 2017

A Retentive Memory of Tetrachloroethene Respiration in Sulfurospirillum halorespirans - involved Proteins and a possible link to Acetylation of a Two-Component Regulatory System.

scientific article published in April 2018

A global proteome approach in uric acid stimulated human aortic endothelial cells revealed regulation of multiple major cellular pathways

scientific article

A patchwork pathway for oxygenase-independent degradation of side chain containing steroids

scientific article published on 21 September 2017

A peptide resource for the analysis of Staphylococcus aureus in host-pathogen interaction studies

scientific article published on 30 July 2015

ATP-Dependent C-F Bond Cleavage Allows the Complete Degradation of 4-Fluoroaromatics without Oxygen

scientific article

Active site alanine preceding catalytic cysteine determines unique substrate specificity in bacterial CoA-acylating prenal dehydrogenase.

scientific article published on 27 February 2018

Advanced tool for characterization of microbial cultures by combining cytomics and proteomics

scientific article published on 30 July 2010

Aerobic Toluene Degraders in the Rhizosphere of a Constructed Wetland Model Show Diurnal Polyhydroxyalkanoate Metabolism

scientific article published on 29 April 2016

Altered immune proteome of Staphylococcus aureus under iron-restricted growth conditions

scientific article

Ammonia-oxidising archaea living at low pH: Insights from comparative genomics

scientific article

An integrative overview of genomic, transcriptomic and proteomic analyses in organohalide respiration research

scientific article published on 30 January 2018

An unusual strategy for the anoxic biodegradation of phthalate

scientific article published on 8 July 2016

Anaerobic naphthalene degradation by sulfate-reducing Desulfobacteraceae from various anoxic aquifers

scientific article published on 13 January 2015

Aromatizing cyclohexa-1,5-diene-1-carbonyl-coenzyme A oxidase. Characterization and its role in anaerobic aromatic metabolism

scientific article published on 27 May 2008

Bacteria dominate the short-term assimilation of plant-derived N in soil

article

Benzylsuccinate Synthase is Post-Transcriptionally Regulated in the Toluene-Degrading Denitrifier Magnetospirillum sp. Strain 15-1

scientific article published on 07 May 2020

Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities

scientific article

Biotransformation of Two Pharmaceuticals by the Ammonia-Oxidizing Archaeon Nitrososphaera gargensis

scientific article

Calculation of partial isotope incorporation into peptides measured by mass spectrometry

scientific article

Candidate Brocadiales dominates C, N and S cycling in anoxic groundwater of a pristine limestone-fracture aquifer

scientific article

Climate shapes the protein abundance of dominant soil bacteria

scientific article published on 28 May 2018

Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47.

scientific article published on January 2010

Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph

scientific article

Communal metabolism by Methylococcaceae and Methylophilaceae is driving rapid aerobic methane oxidation in sediments of a shallow seep near Elba, Italy

scientific article published on 31 July 2019

Comparative Proteomics of <i>Marinobacter</i> sp. TT1 Reveals Corexit Impacts on Hydrocarbon Metabolism, Chemotactic Motility, and Biofilm Formation

scientific article published on 22 December 2020

Comparative evaluation of peptide desalting methods for salivary proteome analysis

scientific article published on 18 April 2014

Comparative evaluation of saliva collection methods for proteome analysis

scientific article published on 04 February 2013

Comparative performance evaluation of multi-metal resistant fungal strains for simultaneous removal of multiple hazardous metals.

scientific article

Comparison of methods for simultaneous identification of bacterial species and determination of metabolic activity by protein-based stable isotope probing (Protein-SIP) experiments

scientific article published in June 2009

Comparison of targeted peptide quantification assays for reductive dehalogenases by selective reaction monitoring (SRM) and precursor reaction monitoring (PRM).

scientific article published on 13 November 2013

Complete nitrification by Nitrospira bacteria

scientific article

Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows

scientific article published on 15 December 2021

Cyanate as an energy source for nitrifiers

scientific article

Decarboxylating and nondecarboxylating glutaryl-coenzyme A dehydrogenases in the aromatic metabolism of obligately anaerobic bacteria

scientific article

Decimal place slope, a fast and precise method for quantifying 13C incorporation levels for detecting the metabolic activity of microbial species

scientific article

Declining capacity of starving Delftia acidovorans MC1 to degrade phenoxypropionate herbicides correlates with oxidative modification of the initial enzyme

scientific article

Dehalococcoides mccartyi strain DCMB5 Respires a broad spectrum of chlorinated aromatic compounds

scientific article published on 7 November 2014

Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation

scientific article published on 06 September 2018

Desulfitobacterium contributes to the microbial transformation of 2,4,5-T by methanogenic enrichment cultures from a Vietnamese active landfill

article

Detection, quantification and identification of fungal extracellular laccases using polyclonal antibody and mass spectrometry

Differences in the secretion pattern of oxidoreductases from Bjerkandera adusta induced by a phenolic olive mill extract.

scientific article

Differences in the whole saliva baseline proteome profile associated with development of oral mucositis in head and neck cancer patients undergoing radiotherapy

scientific article

Differential contribution of nitrifying prokaryotes to groundwater nitrification

scientific article published in 2023

Differential sensitivity of total and active soil microbial communities to drought and forest management

scientific article

Disease Development Is Accompanied by Changes in Bacterial Protein Abundance and Functions in a Refined Model of Dextran Sulfate Sodium (DSS)-Induced Colitis

scientific article published on 26 March 2019

Dysbiotic gut microbiota causes transmissible Crohn's disease-like ileitis independent of failure in antimicrobial defence.

scientific article published on 17 April 2015

Ecological and functional adaptations to water management in a semiarid agroecosystem: a soil metaproteomics approach

scientific article published on 31 August 2017

Effects of chronic dietary exposure of zinc oxide nanoparticles on the serum protein profile of juvenile common carp (Cyprinus carpio L.).

scientific article

Elucidating MTBE degradation in a mixed consortium using a multidisciplinary approach

scientific article

Enhancing metaproteomics--The value of models and defined environmental microbial systems

scientific article published in December 2015

Enrichment and identification of small proteins in a simplified human gut microbiome

scientific article published on 10 December 2019

Environmentally Relevant Concentration of Bisphenol S Shows Slight Effects on SIHUMIx

scientific article published on 19 September 2020

Enzymes involved in phthalate degradation in sulphate-reducing bacteria

scientific article published on 23 May 2019

Exercise Training in Patients with Chronic Heart Failure Promotes Restoration of High-Density Lipoprotein Functional Properties

scientific article published on 20 September 2013

Expanding the use of spectral libraries in proteomics

Following the community development of SIHUMIx - a new intestinal in vitro model for bioreactor use

scientific article published on 10 January 2020

Function is what counts: how microbial community complexity affects species, proteome and pathway coverage in metaproteomics

scientific article published on 01 February 2020

Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss

scientific article published on 07 February 2020

Genome and secretome of Chondrostereum purpureum correspond to saprotrophic and phytopathogenic life styles

scientific article published on 01 March 2019

Genomewide meta-analysis identifies loci associated with IGF-I and IGFBP-3 levels with impact on age-related traits ⬇️

scientific article published on 21 June 2016

Global ecological predictors of the soil priming effect

scientific article published on 02 August 2019

Gut microbial functional maturation and succession during human early life.

scientific article published on 24 April 2018

Heterologous complementation studies in Escherichia coli with the Hyp accessory protein machinery from Chloroflexi provide insight into [NiFe]-hydrogenase large subunit recognition by the HypC protein family

scientific article

Identification of novel substrates of Shigella T3SA through analysis of its virulence plasmid-encoded secretome

scientific article published on 26 October 2017

Identification of periodontitis associated changes in the proteome of whole human saliva by mass spectrometric analysis

scientific article published on 23 June 2013

Impaired HDL function in obese adolescents: impact of lifestyle intervention and bariatric surgery

scientific article published on 13 August 2013

Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments.

scientific article

In situ protein-SIP highlights Burkholderiaceae as key players degrading toluene by para ring hydroxylation in a constructed wetland model.

scientific article published on 30 November 2015

In-depth proteomic analysis of the human cerumen-a potential novel diagnostically relevant biofluid.

scientific article published on 18 March 2013

Incomplete cell disruption of resistant microbes

scientific article published on 04 April 2019

Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP).

scientific article

Insight into the modulation of intestinal proteome of juvenile common carp (Cyprinus carpio L.) after dietary exposure to ZnO nanoparticles.

scientific article

Insights from quantitative metaproteomics and protein-stable isotope probing into microbial ecology

scientific article

Insights into Autotrophic Activities and Carbon Flow in Iron-Rich Pelagic Aggregates (Iron Snow)

scientific article published in 2021

Interspecies metabolite transfer and aggregate formation in a co-culture of Dehalococcoides and Sulfurospirillum dehalogenating tetrachloroethene to ethene

scientific article published on 21 January 2021

Labeling of the pathogenic bacterium Staphylococcus aureus with gold or ferric oxide-core nanoparticles highlights new capabilities for investigation of host-pathogen interactions

scientific article published on 17 December 2013

Land use driven change in soil pH affects microbial carbon cycling processes

scientific article published in Nature Communications

Maximization of cell viability rather than biocatalyst activity improves whole-cell ω-oxyfunctionalization performance.

scientific article published on 7 November 2016

MetaProSIP: automated inference of stable isotope incorporation rates in proteins for functional metaproteomics

scientific article published on December 2014

Metabolic Adaptation of Methanogens in Anaerobic Digesters Upon Trace Element Limitation.

scientific article published on 13 March 2018

Metabolic in Vivo Labeling Highlights Differences of Metabolically Active Microbes from the Mucosal Gastrointestinal Microbiome between High-Fat and Normal Chow Diet

scientific article

Methylamine as a nitrogen source for microorganisms from a coastal marine environment.

scientific article published on 28 February 2017

Molecular fingerprint of high fat diet induced urinary bladder metabolic dysfunction in a rat model

scientific article (publication date: 2013)

Mucosal-associated invariant T-Cell (MAIT) activation is altered by chlorpyrifos- and glyphosate-treated commensal gut bacteria

scientific article published on 01 December 2020

Peptide NMHRYPNQ of the cellular prion protein (PrP(C)) inhibits aggregation and is a potential key for understanding prion-prion interactions

scientific article

Phenol degradation in the strictly anaerobic iron-reducing bacterium Geobacter metallireducens GS-15.

scientific article

Protein-SIP in environmental studies

scientific article published on 23 April 2016

Protein-based stable isotope probing

scientific article published on 18 November 2010

Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures

scientific article published on 19 June 2008

Protein-based stable isotope probing (protein-SIP) in functional metaproteomics

scientific article published on 15 March 2012

Proteome data of whole saliva which are associated with development of oral mucositis in head and neck cancer patients undergoing radiotherapy

scientific article

Proteome data on the microbial microbiome of grasshopper feces

scientific article

Proteome profile and proteogenomics of the organohalide-respiring bacterium Dehalococcoides mccartyi strain CBDB1 grown on hexachlorobenzene as electron acceptor

scientific article

Proteome profiles of HDL particles of patients with chronic heart failure are associated with immune response and also include bacteria proteins

scientific article published on 11 December 2015

Proteomic analysis of oropharyngeal carcinomas reveals novel HPV-associated biological pathways

scientific article

Proteomic data set of the organohalide-respiring Epsilonproteobacterium Sulfurospirillum multivorans adapted to tetrachloroethene and other energy substrates

scientific article

Proteomic dataset of the organohalide-respiring bacterium Dehalococcoides mccartyi strain CBDB1 grown on hexachlorobenzene as electron acceptor

scientific article

Proteomic interrogation of the gut microbiota: potential clinical impact

scientific article published on 31 May 2016

Proteomics of the organohalide-respiring Epsilonproteobacterium Sulfurospirillum multivorans adapted to tetrachloroethene and other energy substrates

scientific article published on 21 September 2015

Pseudomonas spp. are key players in agricultural biogas substrate degradation

scientific article published on 06 September 2019

Pulsed (13)C2-Acetate Protein-SIP Unveils Epsilonproteobacteria as Dominant Acetate Utilizers in a Sulfate-Reducing Microbial Community Mineralizing Benzene

scientific article published on 4 February 2016

Purification and characterization of active-site components of the putative p-cresol methylhydroxylase membrane complex from Geobacter metallireducens

scientific article published on 25 July 2008

Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization

scientific article published on 09 October 2020

Seasonal Patterns of Dominant Microbes Involved in Central Nutrient Cycles in the Subsurface

scientific article published on 30 October 2020

Selenocysteine-independent suppression of UGA codons in the archaeon Methanococcus maripaludis

scientific article published on 24 July 2015

Snake venomics of the Siamese Russell's viper (Daboia russelli siamensis) -- relation to pharmacological activities

scientific article published on 20 January 2009

Soil Fungal:Bacterial Ratios Are Linked to Altered Carbon Cycling

scientific article

Sulfur and methane oxidation by a single microorganism

scientific article published in 2022

Sulfur-34S and 36S Stable Isotope Labeling of Amino Acids for Quantification (SULAQ34/36) of Proteome Analyses

scientific article published on 01 January 2018

Sulfur-34S stable isotope labeling of amino acids for quantification (SULAQ34) of proteomic changes in Pseudomonas fluorescens during naphthalene degradation

scientific article published on 19 April 2013

Sulfur-36S stable isotope labeling of amino acids for quantification (SULAQ)

scientific article published on 16 December 2011

Synbiotic-driven improvement of metabolic disturbances is associated with changes in the gut microbiome in diet-induced obese mice

scientific article published on 05 February 2019

Synergistic biodegradation of aromatic-aliphatic copolyester plastic by a marine microbial consortium

scientific article published on 13 November 2020

The Proteome of the Isolated Chlamydia trachomatis Containing Vacuole Reveals a Complex Trafficking Platform Enriched for Retromer Components

scientific article published on 4 June 2015

The Simplified Human Intestinal Microbiota (SIHUMIx) Shows High Structural and Functional Resistance against Changing Transit Times in In Vitro Bioreactors

scientific article published on 03 December 2019

The active microbial diversity drives ecosystem multifunctionality and is physiologically related to carbon availability in Mediterranean semi-arid soils.

scientific article published on 2 August 2016

The class II benzoyl-coenzyme A reductase complex from the sulfate-reducing Desulfosarcina cetonica

scientific article published on 01 September 2019

The secretome of Trametes versicolor grown on tomato juice medium and purification of the secreted oxidoreductases including a versatile peroxidase

scientific article

The total microbiome functions in bacteria and fungi

scientific article published on 19 December 2019

The wood rot ascomycete Xylaria polymorpha produces a novel GH78 glycoside hydrolase that exhibits α-L-rhamnosidase and feruloyl esterase activities and releases hydroxycinnamic acids from lignocelluloses

scientific article published on 27 April 2012

Thermal proteome profiling allows quantitative assessment of interactions between tetrachloroethene reductive dehalogenase and trichloroethene

scientific article published on 04 June 2018

Time resolved protein-based stable isotope probing (Protein-SIP) analysis allows quantification of induced proteins in substrate shift experiments

scientific article published on 20 May 2011

Tracking active groundwater microbes with D2 O labelling to understand their ecosystem function

scientific article

Using proteins to study how microbes contribute to soil ecosystem services: The current state and future perspectives of soil metaproteomics

scientific article published on 13 November 2018

Widespread soil bacterium that oxidizes atmospheric methane

scientific article published on 08 April 2019

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