List of works - Uri Keich

A Symmetric Length-Aware Enrichment Test.

scientific article published on 03 May 2016

A comprehensive genome-wide map of autonomously replicating sequences in a naive genome

scientific article

Alignment constrained sampling.

scientific article published in February 2011

Apples to apples: improving the performance of motif finders and their significance analysis in the Twilight Zone.

scientific article published in July 2006

Averaging Strategy To Reduce Variability in Target-Decoy Estimates of False Discovery Rate

article

Computational detection of significant variation in binding affinity across two sets of sequences with application to the analysis of replication origins in yeast

scientific article

Confidently estimating the number of DNA replication origins.

scientific article published on 2 July 2010

Controlling the FDR in imperfect matches to an incomplete database

scientific article published on 28 June 2018

Correcting base-assignment errors in repeat regions of shotgun assembly.

scientific article

Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs

scientific article

Exactly Computing the Tail of the Poisson-Binomial Distribution

scientific article published on 28 September 2021

High-resolution mapping, characterization, and optimization of autonomously replicating sequences in yeast.

scientific article

Improved similarity scores for comparing motifs ⬇️

scientific article published on May 4, 2011

Improving MEME via a two-tiered significance analysis.

scientific article

Novel features of ARS selection in budding yeast Lachancea kluyveri

scientific article

Progressive calibration and averaging for tandem mass spectrometry statistical confidence estimation: Why settle for a single decoy?

scientific article published on 12 April 2017

Response to "Mass spectrometrists should search for all peptides, but assess only the ones they care about".

scientific article published in June 2017

Target-Decoy Approach and False Discovery Rate: When Things May Go Wrong ⬇️

scientific article published on May 5, 2011

List of works by Uri Keich

A Symmetric Length-Aware Enrichment Test.

A comprehensive genome-wide map of autonomously replicating sequences in a naive genome

Alignment constrained sampling.

Apples to apples: improving the performance of motif finders and their significance analysis in the Twilight Zone.

Averaging Strategy To Reduce Variability in Target-Decoy Estimates of False Discovery Rate

Computational detection of significant variation in binding affinity across two sets of sequences with application to the analysis of replication origins in yeast

Confidently estimating the number of DNA replication origins.

Controlling the FDR in imperfect matches to an incomplete database

Correcting base-assignment errors in repeat regions of shotgun assembly.

Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs

Exactly Computing the Tail of the Poisson-Binomial Distribution

High-resolution mapping, characterization, and optimization of autonomously replicating sequences in yeast.

Improved similarity scores for comparing motifs ⬇️

Improving MEME via a two-tiered significance analysis.

Novel features of ARS selection in budding yeast Lachancea kluyveri

Progressive calibration and averaging for tandem mass spectrometry statistical confidence estimation: Why settle for a single decoy?

Response to "Mass spectrometrists should search for all peptides, but assess only the ones they care about".

Target-Decoy Approach and False Discovery Rate: When Things May Go Wrong ⬇️