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List of works by Frank Schmidt

A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions

scientific article published on 8 September 2017

A peptide resource for the analysis of Staphylococcus aureus in host-pathogen interaction studies

scientific article published on 30 July 2015

A proteomic perspective of the interplay of Staphylococcus aureus and human alveolar epithelial cells during infection

scientific article published on 2 August 2015

A proteomics workflow for quantitative and time-resolved analysis of adaptation reactions of internalized bacteria

scientific article published on 30 April 2013

Activation of the alternative sigma factor SigB of Staphylococcus aureus following internalization by epithelial cells - an in vivo proteomics perspective

scientific article published on 7 December 2013

Adaptive immune response to lipoproteins of Staphylococcus aureus in healthy subjects

scientific article published on 21 June 2016

Advanced tool for characterization of microbial cultures by combining cytomics and proteomics

scientific article published on 30 July 2010

Altered immune proteome of Staphylococcus aureus under iron-restricted growth conditions

scientific article

Alternative fluorescent labeling strategies for characterizing gram-positive pathogenic bacteria: Flow cytometry supported counting, sorting, and proteome analysis of Staphylococcus aureus retrieved from infected host cells

scientific article

An improved strategy for selective and efficient enrichment of integral plasma membrane proteins of mycobacteria

scientific article published in May 2007

Analysis of Staphylococcus aureus proteins secreted inside infected human epithelial cells

scientific article published on 18 June 2018

Analysis of automatically generated peptide mass fingerprints of cellular proteins and antigens from Helicobacter pylori 26695 separated by two-dimensional electrophoresis

scientific article

Assembling proteomics data as a prerequisite for the analysis of large scale experiments

scientific article

Calculation of partial isotope incorporation into peptides measured by mass spectrometry

scientific article

Characterization of human and Staphylococcus aureus proteins in respiratory mucosa by in vivo- and immunoproteomics

scientific article published on 15 January 2017

Chromosome-free bacterial cells are safe and programmable platforms for synthetic biology

scientific article published on 06 March 2020

Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47.

scientific article published on January 2010

Comparative exoproteome profiling of an invasive and a commensal Staphylococcus haemolyticus isolate

scientific article published on 22 November 2018

Comparative proteome analysis of culture supernatant proteins from virulent Mycobacterium tuberculosis H37Rv and attenuated M. bovis BCG Copenhagen

scientific article published in October 2003

Comparative proteome analysis reveals conserved and specific adaptation patterns of Staphylococcus aureus after internalization by different types of human non-professional phagocytic host cells

scientific article

Comparison of methods for simultaneous identification of bacterial species and determination of metabolic activity by protein-based stable isotope probing (Protein-SIP) experiments

scientific article published in June 2009

Complementary analysis of the Mycobacterium tuberculosis proteome by two-dimensional electrophoresis and isotope-coded affinity tag technology

scientific article published on 13 October 2003

Comprehensive quantitative proteome analysis of 20S proteasome subtypes from rat liver by isotope coded affinity tag and 2-D gel-based approaches

scientific article published in August 2006

Data visualization in environmental proteomics

scientific article

Decimal place slope, a fast and precise method for quantifying 13C incorporation levels for detecting the metabolic activity of microbial species

scientific article

Defensive Function of Transposable Elements in Bacteria

scientific article published on 19 August 2019

Distinctive mass losses of tryptic peptides generated by matrix-assisted laser desorption/ionization time-of-flight/time-of-flight

scientific article published in January 2006

Early-Stage Staphylococcus aureus Bloodstream Infection Causes Changes in the Concentrations of Lipoproteins and Acute-Phase Proteins and Is Associated with Low Antibody Titers against Bacterial Virulence Factors

scientific article published on 21 January 2020

Exome Genotyping Identifies Pleiotropic Variants Associated with Red Blood Cell Traits

scientific article

Hfq modulates global protein pattern and stress response in Bordetella pertussis

scientific article published on 24 October 2019

Identification of Lactobacilli from deep carious lesions by means of species-specific PCR and MALDI-TOF mass spectrometry

scientific article published in January 2013

Identification of harmless and pathogenic algae of the genus Prototheca by MALDI-MS.

scientific article

In vivo Proteomics Approaches for the Analysis of Bacterial Adaptation Reactions in Host–Pathogen Settings

scientific article published on 01 January 2018

In vivo proteomics identifies the competence regulon and AliB oligopeptide transporter as pathogenic factors in pneumococcal meningitis

scientific article published on 29 July 2019

Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP).

scientific article

Insights from quantitative metaproteomics and protein-stable isotope probing into microbial ecology

scientific article

Intranasal Vaccination With Lipoproteins Confers Protection Against Pneumococcal Colonisation

article by Franziska Voß et al published 2018 in Frontiers in Immunology

Iterative data analysis is the key for exhaustive analysis of peptide mass fingerprints from proteins separated by two-dimensional electrophoresis

scientific article

Labeling of the pathogenic bacterium Staphylococcus aureus with gold or ferric oxide-core nanoparticles highlights new capabilities for investigation of host-pathogen interactions

scientific article published on 17 December 2013

Laboratory Mice Are Frequently Colonized with Staphylococcus aureus and Mount a Systemic Immune Response-Note of Caution for In vivo Infection Experiments

scientific article published on 2 May 2017

Omics Approaches for the Study of Adaptive Immunity to Staphylococcus aureus and the Selection of Vaccine Candidates

scientific article published on 07 March 2016

Peptide mass fingerprinting

scientific article published on 12 January 2005

Prediction of flocculation ability of brewing yeast inoculates by flow cytometry, proteome analysis, and mRNA profiling

scientific article

Protein identification and tracking in two-dimensional electrophoretic gels by minimal protein identifiers

scientific article

Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures

scientific article published on 19 June 2008

Protein-based stable isotope probing (protein-SIP) in functional metaproteomics

scientific article published on 15 March 2012

Proteins unique to intraphagosomally grown Mycobacterium tuberculosis

scientific article published in April 2006

Proteome analysis of Bordetella pertussis isolated from human macrophages

scientific article published on 9 February 2016

Proteome analysis of host–pathogen interactions: Investigation of pathogen responses to the host cell environment ⬇️

scientific article published on June 28, 2011

Proteome data from a host-pathogen interaction study with Staphylococcus aureus and human lung epithelial cells

scientific article

Proteome profiling of secreted and membrane vesicle associated proteins of an invasive and a commensal isolate

scientific article published on 11 January 2019

Proteomic identification of PSF and p54(nrb) as topBP1‐interacting proteins ⬇️

scientific article published on May 1, 2012

Proteomics approaches for the analysis of enriched microbial subpopulations and visualization of complex functional information

scientific article

Quantitative proteome analysis of cisplatin-induced apoptotic Jurkat T cells by stable isotope labeling with amino acids in cell culture, SDS-PAGE, and LC-MALDI-TOF/TOF MS.

scientific article

Quantitative proteomics in the field of microbiology

scientific article published on March 2014

Rapid determination of amino acid incorporation by stable isotope labeling with amino acids in cell culture (SILAC).

scientific article

SOS2 and ACP1 Loci Identified through Large-Scale Exome Chip Analysis Regulate Kidney Development and Function

scientific article published on 5 December 2016

Secreted Immunomodulatory Proteins of Staphylococcus aureus Activate Platelets and Induce Platelet Aggregation

scientific article published on 19 March 2018

Shotgun mass mapping of Lactobacillus species and subspecies from caries related isolates by MALDI-MS.

scientific article

Single-Cell and Time-Resolved Profiling of Intracellular Salmonella Metabolism in Primary Human Cells

scientific article published on 31 May 2019

Specific serum IgG at diagnosis of Staphylococcus aureus bloodstream invasion is correlated with disease progression

scientific article published on 5 July 2015

Staphylococcal serine protease-like proteins are pacemakers of allergic airway reactions to Staphylococcus aureus

scientific article published on 10 May 2016

Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions

scientific article

Staphylococcus aureus controls interleukin-5 release in upper airway inflammation

scientific article published on 13 December 2017

Sulfur-34S and 36S Stable Isotope Labeling of Amino Acids for Quantification (SULAQ34/36) of Proteome Analyses

scientific article published on 01 January 2018

Sulfur-34S stable isotope labeling of amino acids for quantification (SULAQ34) of proteomic changes in Pseudomonas fluorescens during naphthalene degradation

scientific article published on 19 April 2013

Technical report: xMAPr - High-dynamic-range (HDR) quantification of antigen-specific antibody binding

scientific article published on 01 November 2019

The Proteome of the Isolated Chlamydia trachomatis Containing Vacuole Reveals a Complex Trafficking Platform Enriched for Retromer Components

scientific article published on 4 June 2015

Time resolved protein-based stable isotope probing (Protein-SIP) analysis allows quantification of induced proteins in substrate shift experiments

scientific article published on 20 May 2011

Time-resolved quantitative proteome profiling of host-pathogen interactions: the response of Staphylococcus aureus RN1HG to internalisation by human airway epithelial cells

scientific article

Translation initiation factor IF2 contributes to ribosome assembly and maturation during cold adaptation.

scientific article

Web-accessible proteome databases for microbial research

scientific article published on May 2004

reSpect: software for identification of high and low abundance ion species in chimeric tandem mass spectra

scientific article published on 29 September 2015

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