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List of works by Jiří Vymětal

AMBER and CHARMM Force Fields Inconsistently Portray the Microscopic Details of Phosphorylation

scientific article published on 06 December 2018

Amino Acid Interaction (INTAA) web server

scientific article

Amyloid β Fibril Elongation by Monomers Involves Disorder at the Tip.

scientific article published on 4 September 2017

Effect of TFE on the Helical Content of AK17 and HAL-1 Peptides: Theoretical Insights into the Mechanism of Helix Stabilization

scientific article published on 03 February 2016

Focused conformational sampling in proteins.

scientific article published in November 2017

Gyration- and inertia-tensor-based collective coordinates for metadynamics. Application on the conformational behavior of polyalanine peptides and Trp-cage folding

scientific article published on 30 September 2011

Metadynamics as a tool for mapping the conformational and free-energy space of peptides--the alanine dipeptide case study.

scientific article

Random protein sequences can form defined secondary structures and are well-tolerated in vivo.

scientific article published on 13 November 2017

Retro operation on the Trp-cage miniprotein sequence produces an unstructured molecule capable of folding similar to the original only upon 2,2,2-trifluoroethanol addition.

scientific article

Rigid duplex alpha-cyclodextrin reversibly connected with disulfide bonds. Synthesis and inclusion complexes.

scientific article

Sequence Versus Composition: What Prescribes IDP Biophysical Properties?

scientific article published on 03 July 2019

Toward Ab Initio Protein Folding: Inherent Secondary Structure Propensity of Short Peptides from the Bioinformatics and Quantum-Chemical Perspective

scientific article published on 31 January 2019

Widespread evolutionary crosstalk among protein domains in the context of multi-domain proteins

scientific article published in PLoS ONE