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List of works by Petr V Nazarov

<scp>AllergoOncology</scp>: Biomarkers and refined classification for research in the allergy and glioma nexus—A joint <scp>EAACI‐EANO</scp> position paper

scientific article published in 2024

A mathematical model of actin filament turnover for fitting FRAP data

scientific article

AN1-type zinc finger protein 3 (ZFAND3) is a transcriptional regulator that drives Glioblastoma invasion

scientific article published on 11 December 2020

Altered metabolic landscape in IDH-mutant gliomas affects phospholipid, energy, and oxidative stress pathways.

scientific article published on 20 October 2017

An integrative simulation model linking major biochemical reactions of actin-polymerization to structural properties of actin filaments.

scientific article published on 27 November 2008

Analysis of the dynamic co-expression network of heart regeneration in the zebrafish.

scientific article

Artificial neural network modification of simulation-based fitting: application to a protein-lipid system.

scientific article published in March 2004

Bronchial airway gene expression in smokers with lung or head and neck cancer

scientific article published on 04 February 2014

Constitutive activation of oncogenic PDGFRα-mutant proteins occurring in GIST patients induces receptor mislocalisation and alters PDGFRα signalling characteristics.

scientific article

Cytokine-mediated modulation of the hepatic miRNome: miR-146b-5p is an IL-6-inducible miRNA with multiple targets

scientific article published on 26 August 2018

Data on quantification of signaling pathways activated by KIT and PDGFRA mutants.

scientific article

Decoding of exon splicing patterns in the human RUNX1-RUNX1T1 fusion gene

scientific article published on 27 August 2015

Deconvolution of transcriptomes and miRNomes by independent component analysis provides insights into biological processes and clinical outcomes of melanoma patients

scientific article published on 18 September 2019

Dynamic regulation of microRNA expression following interferon-γ-induced gene transcription.

scientific article

From 'I' to 'L' and back again: the odyssey of membrane-bound M13 protein.

scientific article published on 08 April 2009

Identification of SOCS2 and SOCS6 as biomarkers in human colorectal cancer

scientific article

Identification of beta-arrestin-1 as a diagnostic biomarker in lung cancer

scientific article published on 06 August 2018

Insights into ligand stimulation effects on gastro-intestinal stromal tumors signalling

scientific article

Interplay of microRNAs, transcription factors and target genes: linking dynamic expression changes to function ⬇️

scientific article published on January 17, 2013

Membrane-bound peptides mimicking transmembrane Vph1p helix 7 of yeast V-ATPase: a spectroscopic and polarity mismatch study.

scientific article published on 16 September 2005

MicroRNA as biomarkers and regulators in B-cell chronic lymphocytic leukemia.

scientific article

ORFhunteR: An accurate approach to the automatic identification and annotation of open reading frames in human mRNA molecules

scientific article published in 2022

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα

scientific article published on 04 June 2021

Patient-derived organoids and orthotopic xenografts of primary and recurrent gliomas represent relevant patient avatars for precision oncology

scientific article published on 03 October 2020

Predicting clinical outcome of neuroblastoma patients using an integrative network-based approach.

scientific article

Prognostic transcriptional association networks: a new supervised approach based on regression trees ⬇️

scientific article published on November 21, 2010

RNA sequencing and transcriptome arrays analyses show opposing results for alternative splicing in patient derived samples

scientific article

RNAi/CRISPR Screens: from a Pool to a Valid Hit

scientific article published on 31 August 2018

Reference-free deconvolution, visualization and interpretation of complex DNA methylation data using DecompPipeline, MeDeCom and FactorViz

scientific article published on 25 September 2020

Self-association of transmembrane alpha-helices in model membranes: importance of helix orientation and role of hydrophobic mismatch.

scientific article published on 15 September 2005

Signatures of microRNAs and selected microRNA target genes in human melanoma.

scientific article

Stem cell-associated heterogeneity in Glioblastoma results from intrinsic tumor plasticity shaped by the microenvironment

scientific article published on 16 April 2019

Structure of membrane-embedded M13 major coat protein is insensitive to hydrophobic stress

scientific article published on 17 August 2007

Ten quick tips for biomarker discovery and validation analyses using machine learning

scientific article published on 11 August 2022

The PD-L1- and IL6-mediated dampening of the IL27/STAT1 anticancer responses are prevented by α-PD-L1 or α-IL6 antibodies

scientific article published on 24 July 2018

The acquisition of resistance to TNFα in breast cancer cells is associated with constitutive activation of autophagy as revealed by a transcriptome analysis using a custom microarray.

scientific article published on July 2011

The oncogenic FIP1L1-PDGFRα fusion protein displays skewed signaling properties compared to its wild-type PDGFRα counterpart.

scientific article published on 17 July 2015

Transcriptional response to cardiac injury in the zebrafish: systematic identification of genes with highly concordant activity across in vivo models.

scientific article

Use of circulating microRNAs to diagnose acute myocardial infarction

scientific article published on 17 January 2012

What Do We Learn from Spheroid Culture Systems? Insights from Tumorspheres Derived from Primary Colon Cancer Tissue

scientific article

Whole transcriptome microarrays identify long non-coding RNAs associated with cardiac hypertrophy.

scientific article

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