List of works - Jérôme Chave

<i>rcontroll</i>: An R interface for the individual‐based forest dynamics simulator <i>TROLL</i>

scientific article published in 2023

A Standard Protocol for Liana Censuses1

article by Jeffrey J. Gerwing et al published 24 January 2006 in Biotropica

A global map of root biomass across the world's forests

scientific article published on 31 August 2021

A simulation method to infer tree allometry and forest structure from airborne laser scanning and forest inventories

scientific article published on 10 September 2020

A spatially explicit neutral model of beta-diversity in tropical forests

scientific article

A test of community assembly rules using foliar endophytes from a tropical forest canopy

scientific article published in 2020

Above-ground biomass and productivity in a rain forest of eastern South America

scientific article published on 02 July 2008

Aboveground biomass density models for NASA’s Global Ecosystem Dynamics Investigation (GEDI) lidar mission

scientific article published in March 2022

Allometric equations for integrating remote sensing imagery into forest monitoring programmes.

scientific article

Amazon forest carbon dynamics predicted by profiles of canopy leaf area and light environment

scientific article

Amazon tree dominance across forest strata

scientific article

An individual-based forest model to jointly simulate carbon and tree diversity in Amazonia: description and applications

scientific article published on 26 July 2017

An unexpectedly large count of trees in the West African Sahara and Sahel

scientific article published on 14 October 2020

Analyzing tropical forest tree species abundance distributions using a nonneutral model and through approximate Bayesian inference.

scientific article

Andean orogeny and the diversification of lowland neotropical rain forest trees: A case study in Sapotaceae

scholarly article

Annual Rainfall and Seasonality Predict Pan-tropical Patterns of Liana Density and Basal Area

Assessing evidence for a pervasive alteration in tropical tree communities.

scientific article

Author Correction: Tree mode of death and mortality risk factors across Amazon forests

scientific article published on 04 January 2021

Averting biodiversity collapse in tropical forest protected areas

scientific article

Beta-diversity in tropical forest trees

scientific article published on January 2002

Biased-corrected richness estimates for the Amazonian tree flora

scientific article published on 23 June 2020

Biodiversity recovery of Neotropical secondary forests

scientific article published on 06 March 2019

Biogeographical patterns of liana abundance and diversity

scholarly article published 18 October 2014

Body size determines soil community assembly in a tropical forest

scientific article published on 22 November 2018

Can light‐saturated photosynthesis in lowland tropical forests be estimated by one light level?

scientific article published on 14 June 2020

Can plant DNA barcoding be implemented in species-rich tropical regions? A perspective from São Paulo State, Brazil

article

Canopy Area of Large Trees Explains Aboveground Biomass Variations across Nine Neotropical Forest Landscapes

article published in 2018

Canopy area of large trees explains aboveground biomass variations across neotropical forest landscapes

scientific article published in 2018

Censusing and Measuring Lianas: A Quantitative Comparison of the Common Methods1

Changes of species diversity in a simulated fragmented neutral landscape

scientific article published in 2007

Characterization of Pseudomonas aeruginosa Quorum Sensing Inhibitors from the Endophyte Lasiodiplodia venezuelensis and Evaluation of Their Antivirulence Effects by Metabolomics

scientific article published on 26 August 2021

Cluster analysis of spatial patterns in Malaysian tree species

scientific article

Coarse woody debris are buffering mortality-induced carbon losses to the atmosphere in tropical forests

scientific article

Comparative metabolomic study of fungal foliar endophytes and their long-lived host Astrocaryum sciophilum: a model for exploring the chemodiversity of host-microbe interactions ⬇️

scientific article published on 19 December 2023

Comparing Classical Community Models: Theoretical Consequences for Patterns of Diversity

scientific article published in 2002

Comparing classical community models: theoretical consequences for patterns of diversity

scientific article

Compositional response of Amazon forests to climate change ⬇️

article

Consistency of vegetation index seasonality across the Amazon rainforest

scholarly article by Eduardo Eiji Maeda et al published October 2016 in International Journal of Applied Earth Observation and Geoinformation

Continental-scale patterns of canopy tree composition and function across Amazonia.

scientific article published in September 2006

Coping with branch excision when measuring leaf net photosynthetic rates in a lowland tropical forest

scientific article published on 05 March 2020

Corrigendum to “Andean orogeny and the diversification of lowland neotropical rain forest trees: A case study in Sapotaceae” [Global and Planetary Change 201 (2021) 103481]

scholarly article

Corrigendum to “Andean orogeny and the diversification of lowland neotropical rain forest trees: A case study in Sapotaceae” [Global and Planetary Change 201 (2021) 103481]

correction to a scholarly article

Coupling of ecosystem-scale plant water storage and leaf phenology observed by satellite

article

Critical Coarsening without Surface Tension: The Universality Class of the Voter Model

scientific article published in Physical Review Letters

Decomposition in tropical forests: a pan-tropical study of the effects of litter type, litter placement and mesofaunal exclusion across a precipitation gradient

article by Jennifer S Powers et al published July 2009 in Journal of Ecology

Decoupled leaf and stem economics in rain forest trees

scientific article published on 29 August 2010

Determinants and spatial modeling of tree β-diversity in a tropical forest landscape in Panama

Differences in volatile terpene composition between the bark and leaves of tropical tree species

scientific article published on 2 August 2012

Disentangling competitive vs. climatic drivers of tropical forest mortality

scientific article published in 2017

Diversity and carbon storage across the tropical forest biome ⬇️

scientific article

Diversity of the volatile organic compounds emitted by 55 species of tropical trees: a survey in French Guiana.

scientific article published on November 2009

Does climate directly influence NPP globally?

scientific article

Does soil pyrogenic carbon determine plant functional traits in Amazon Basin forests? ⬇️

article

Drought Sensitivity of the Amazon Rainforest

scientific article (publication date: 6 March 2009)

Drought tolerance as predicted by leaf water potential at turgor loss point varies strongly across species within an Amazonian forest

article

Dry‐season decline in tree sapflux is correlated with leaf turgor loss point in a tropical rainforest

scientific article published on 24 July 2018

Dynamics and persistence in a metacommunity centred on the plantAntirrhinum majus: theoretical predictions and an empirical test

article

Dynamics of aboveground carbon stocks in a selectively logged tropical forest

scientific article

Ecophylogenetics: advances and perspectives

scientific article

Effect of tree demography and flexible root water uptake for modeling the carbon and water cycles of Amazonia

scientific article published on 15 April 2022

Environmental determinants of leaf litter ant community composition along an elevational gradient

scientific article published in 2020

Error propagation and scaling for tropical forest biomass estimates ⬇️

scientific article

Error propagation and scaling for tropical forest biomass estimates

article

Estimation of biomass and carbon stocks: the case of the Atlantic Forest

scientific article published in 2008

Evidence for arrested succession in a liana-infested Amazonian forest ⬇️

article

Evolutionary diversity is associated with wood productivity in Amazonian forests

scientific article published on 11 November 2019

Evolutionary heritage influences Amazon tree ecology ⬇️

scientific article published in December 2016

Evolutionary patterns of range size, abundance and species richness in Amazonian angiosperm trees

scientific article

Evolutionary patterns of volatile terpene emissions across 202 tropical tree species

scientific article

Fast demographic traits promote high diversification rates of Amazonian trees ⬇️

scientific article

Fast determination of light availability and leaf area index in tropical forests

scientific article published in 2002

Field methods for sampling tree height for tropical forest biomass estimation. ⬇️

scientific article published on 13 February 2018

Floristic patterns and plant traits of Mediterranean communities in fragmented habitats

article

Forest degradation and biomass loss along the Chocó region of Colombia

scholarly article by Victoria Meyer et al published 23 March 2019 in Carbon Balance and Management

Functional diversity improves tropical forest resilience: Insights from a long‐term virtual experiment

scientific article published on 12 November 2019

Functional recovery of secondary tropical forests

scientific article

Functional trait variation and sampling strategies in species-rich plant communities

article

Functional traits of individual trees reveal ecological constraints on community assembly in tropical rain forests

article

Functional traits shape ontogenetic growth trajectories of rain forest tree species

article

Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family

scientific article published on 2 April 2014

Global transpiration data from sap flow measurements: the SAPFLUXNET database

scientific article

Ground Data are Essential for Biomass Remote Sensing Missions

scientific article published on 27 April 2019

Habitat specialization and phylogenetic structure of tree species in a coastal Brazilian white-sand forest

article

High foliar K and P resorption efficiencies in old‐growth tropical forests growing on nutrient‐poor soils

scientific article published on 14 June 2021

High-resolution forest mapping for behavioural studies in the Nature Reserve 'Les Nouragues', French Guiana.

scientific article

Historical biogeography identifies a possible role of Miocene wetlands in the diversification of the Amazonian rocket frogs (Aromobatidae: Allobates ) ⬇️

scientific article

Hyperdominance in Amazonian forest carbon cycling ⬇️

scientific article published on 28 April 2015

Hyperdominance in the Amazonian tree flora

scientific article

Identification and dereplication of endophytic Colletotrichum strains by MALDI TOF mass spectrometry and molecular networking

scientific article published on 13 November 2020

Identification of Amazonian trees with DNA barcodes

scientific article

Improved allometric models to estimate the aboveground biomass of tropical trees.

scientific article

Improving plant allometry by fusing forest models and remote sensing

scientific article published on 12 April 2019

In Situ Reference Datasets From the TropiSAR and AfriSAR Campaigns in Support of Upcoming Spaceborne Biomass Missions

Increasing and widespread vulnerability of intact tropical rainforests to repeated droughts

scientific article published in 2022

Inferring neutral biodiversity parameters using environmental DNA data sets

scientific article

Inferring the parameters of the neutral theory of biodiversity using phylogenetic information and implications for tropical forests.

scientific article

Interspecific variation in seedling responses to seed limitation and habitat conditions for 14 Neotropical woody species

article

Isolation and Identification of Isocoumarin Derivatives With Specific Inhibitory Activity Against Wnt Pathway and Metabolome Characterization of Lasiodiplodia venezuelensis ⬇️

scientific article published on 12 August 2021

Large‐scale DNA‐based survey of frogs in Amazonia suggests a vast underestimation of species richness and endemism

Late twentieth-century patterns and trends in Amazon tree turnover

article

Late twentieth-century trends in the structure and dynamics of South American forests

Latent Dirichlet Allocation reveals spatial and taxonomic structure in a DNA-based census of soil biodiversity from a tropical forest

scientific article published on 02 December 2019

Latitudinal phytoplankton distribution and the neutral theory of biodiversity

scholarly article by Guillem Chust et al published 16 November 2012 in Global Ecology and Biogeography

Leaf drought tolerance cannot be inferred from classic leaf traits in a tropical rainforest

scientific article published on 12 November 2019

Long-term thermal sensitivity of Earth's tropical forests

scientific article published on 21 May 2020

Markedly divergent estimates of Amazon forest carbon density from ground plots and satellites ⬇️

scientific article published on 22 April 2014

Mast fruiting is a frequent strategy in woody species of eastern South America

scientific article

Masting is uncommon in trees that depend on mutualist dispersers in the context of global climate and fertility gradients

scientific article published in 2023

Modelling forest–savanna mosaic dynamics in man-influenced environments: effects of fire, climate and soil heterogeneity

article

Monitoring Strategy for Eight Amphibian Species in French Guiana, South America ⬇️

scientific article published on June 28, 2013

More than 10,000 pre-Columbian earthworks are still hidden throughout Amazonia

scientific article published on 12 October 2023

Multi-taxa environmental DNA inventories reveal distinct taxonomic and functional diversity in urban tropical forest fragments

scientific article published on 09 July 2021

Nation-wide mapping of tree-level aboveground carbon stocks in Rwanda

scientific article published in 2022

Negative asymmetry response of ecosystem productivity to annual rainfall anomalies over the conterminous U.S during the 2010 -2018 period

scientific article published on 23 March 2020

New formula and conversion factor to compute basic wood density of tree species using a global wood technology database

article

New formula and conversion factor to compute tree species basic wood density from a global wood technology database

article

Nutrient-cycling mechanisms other than the direct absorption from soil may control forest structure and dynamics in poor Amazonian soils

scientific article

Pan-tropical prediction of forest structure from the largest trees

scientific article published in 2018

Phylogenetic density dependence and environmental filtering predict seedling mortality in a tropical forest

scientific article

Phylogenetic diversity of Amazonian tree communities ⬇️

article

Prevalence of phylogenetic clustering at multiple scales in an African rain forest tree community

scientific article published on 02 April 2014

Quantifying Tropical Plant Diversity Requires an Integrated Technological Approach

scientific article published on 07 September 2020

Rapid decay of tree-community composition in Amazonian forest fragments

scholarly article

Rapid diversification rates in Amazonian Chrysobalanaceae inferred from plastid genome phylogenetics

scientific article published in 2020

Rare species support vulnerable functions in high-diversity ecosystems

scientific article

Rarity of monodominance in hyperdiverse Amazonian forests

scientific article published on 25 September 2019

Reconciling neutral community models and environmental filtering: theory and an empirical test

article

Regional and phylogenetic variation of wood density across 2456 Neotropical tree species

scientific article

SAR tomography for the retrieval of forest biomass and height: Cross-validation at two tropical forest sites in French Guiana ⬇️

article

Satellite passive microwaves reveal recent climate-induced carbon losses in African drylands

scientific article published in 2018

Satellite-observed pantropical carbon dynamics

scientific article published on 29 July 2019

Shotgun assembly of the assassin bug Brontostoma colossus mitochondrial genome (Heteroptera, Reduviidae).

scientific article published on 18 September 2014

Simulating the Long-term Response of Tropical Wet Forests to Fragmentation

article

Slow rate of secondary forest carbon accumulation in the Guianas compared with the rest of the Neotropics

scientific article published on 18 October 2019

Soil physical conditions limit palm and tree basal area in Amazonian forests

article

Soil properties explain tree growth and mortality, but not biomass, across phosphorus-depleted tropical forests

scientific article published on 10 February 2020

Spatial and Biological Aspects of Reserve Design

Spatial and temporal variation of biomass in a tropical forest: results from a large census plot in Panama

scientific article published on 03 June 2003

Species Distribution Modelling: Contrasting presence-only models with plot abundance data. ⬇️

scientific article published on 17 January 2018

Strong floristic distinctiveness across Neotropical successional forests

scientific article published in July 2022

Stronger seasonal adjustment in leaf turgor loss point in lianas than trees in an Amazonian forest

scientific article

Taking the pulse of Earth's tropical forests using networks of highly distributed plots

scientific article

Tallo–a global tree allometry and crown architecture database

scientific article published on 15 June 2022

Terrestrial laser scanning in forest ecology: Expanding the horizon

scientific article published in December 2020

Testing metabolic ecology theory for allometric scaling of tree size, growth and mortality in tropical forests.

scientific article published in May 2006

Testing the generality of above-ground biomass allometry across plant functional types at the continent scale

scientific article

Testing the metabolic theory of ecology

scientific article published on 30 August 2012

The Biomass Mission: Objectives and Requirements

The European Space Agency BIOMASS mission: Measuring forest above-ground biomass from space

scientific article published in 2019

The Forest Observation System, building a global reference dataset for remote sensing of forest biomass

scientific article published on 10 October 2019

The Influence of Prior Learning Experience on Pollinator Choice: An Experiment Using Bumblebees on Two Wild Floral Types of Antirrhinum majus.

scientific article

The Status of Technologies to Measure Forest Biomass and Structural Properties: State of the Art in SAR Tomography of Tropical Forests

The above-ground coarse wood productivity of 104 Neotropical forest plots

article

The erosion of biodiversity and biomass in the Atlantic Forest biodiversity hotspot ⬇️

scientific article published on 11 December 2020

The global spectrum of plant form and function

scientific article

The global spectrum of plant form and function: enhanced species-level trait dataset

scientific article published on 7 December 2022

The importance of phylogenetic structure in biodiversity studies

scholarly article

The importance of tree demography and root water uptake for modelling the carbon and water cycles of Amazonia

scholarly article by Emilie Joetzjer et al published 18 July 2018 in Biogeosciences Discussions

The overlooked contribution of trees outside forests to tree cover and woody biomass across Europe

scientific article published on 15 September 2023

The problem of pattern and scale in ecology: what have we learned in 20 years?

scientific article

The relationship between seed mass and mean time to germination for 1037 tree species across five tropical forests

scientific article published on 19 September 2008

The relationship between wood density and mortality in a global tropical forest data set.

scientific article

The role of gap phase processes in the biomass dynamics of tropical forests

article

Theoretical biology: comparing models of species abundance

scientific article published in May 2006

Towards a worldwide wood economics spectrum

scientific article published on 20 February 2009

Transferability of an individual- and trait-based forest dynamics model: A test case across the tropics

scientific article published on 10 November 2021

Tree mode of death and mortality risk factors across Amazon forests

scientific article published on 09 November 2020

Tree size and climatic water deficit control root to shoot ratio in individual trees globally

scientific article published on 23 October 2017

Tropical forests did not recover from the strong 2015-2016 El Niño event

scientific article published on 05 February 2020

Unraveling the biogeographical history of Chrysobalanaceae from plastid genomes

scientific article published on 21 June 2016

Unveiling the diet of elusive rainforest herbivores in next generation sequencing era? The tapir as a case study

scientific article (publication date: 2013)

Using functional traits and phylogenetic trees to examine the assembly of tropical tree communities

scholarly article by Christopher Baraloto et al published 14 March 2012 in Journal of Ecology

Using repeated small-footprint LiDAR acquisitions to infer spatial and temporal variations of a high-biomass Neotropical forest ⬇️

scientific article published in 2015

Variation in stem mortality rates determines patterns of above-ground biomass in Amazonian forests: implications for dynamic global vegetation models. ⬇️

scientific article

Variations of carbon allocation and turnover time across tropical forests

scientific article published on 21 April 2021

Vertical profiles of leaf photosynthesis and leaf traits and soil nutrients in two tropical rainforests in French Guiana before and after a 3-year nitrogen and phosphorus addition experiment

scientific article published on 04 January 2022

Wet and dry tropical forests show opposite successional pathways in wood density but converge over time

scientific article published on 22 April 2019

Widespread occurrence of bd in French Guiana, South America

scientific article published on 22 April 2015

Wind Speed Controls Forest Structure in a Subtropical Forest Exposed to Cyclones: A Case Study Using an Individual-Based Model

scientific article published in 2022

biomass : an r package for estimating above-ground biomass and its uncertainty in tropical forests

article

List of works by Jérôme Chave

<i>rcontroll</i>: An R interface for the individual‐based forest dynamics simulator <i>TROLL</i>

A Standard Protocol for Liana Censuses1

A global map of root biomass across the world's forests

A simulation method to infer tree allometry and forest structure from airborne laser scanning and forest inventories

A spatially explicit neutral model of beta-diversity in tropical forests

A test of community assembly rules using foliar endophytes from a tropical forest canopy

Above-ground biomass and productivity in a rain forest of eastern South America

Aboveground biomass density models for NASA’s Global Ecosystem Dynamics Investigation (GEDI) lidar mission

Allometric equations for integrating remote sensing imagery into forest monitoring programmes.

Amazon forest carbon dynamics predicted by profiles of canopy leaf area and light environment

Amazon tree dominance across forest strata

An individual-based forest model to jointly simulate carbon and tree diversity in Amazonia: description and applications

An unexpectedly large count of trees in the West African Sahara and Sahel

Analyzing tropical forest tree species abundance distributions using a nonneutral model and through approximate Bayesian inference.

Andean orogeny and the diversification of lowland neotropical rain forest trees: A case study in Sapotaceae

Annual Rainfall and Seasonality Predict Pan-tropical Patterns of Liana Density and Basal Area

Assessing evidence for a pervasive alteration in tropical tree communities.

Author Correction: Tree mode of death and mortality risk factors across Amazon forests

Averting biodiversity collapse in tropical forest protected areas

Beta-diversity in tropical forest trees

Biased-corrected richness estimates for the Amazonian tree flora

Biodiversity recovery of Neotropical secondary forests

Biogeographical patterns of liana abundance and diversity

Body size determines soil community assembly in a tropical forest

Can light‐saturated photosynthesis in lowland tropical forests be estimated by one light level?

Can plant DNA barcoding be implemented in species-rich tropical regions? A perspective from São Paulo State, Brazil

Canopy Area of Large Trees Explains Aboveground Biomass Variations across Nine Neotropical Forest Landscapes

Canopy area of large trees explains aboveground biomass variations across neotropical forest landscapes

Censusing and Measuring Lianas: A Quantitative Comparison of the Common Methods1

Changes of species diversity in a simulated fragmented neutral landscape

Characterization of Pseudomonas aeruginosa Quorum Sensing Inhibitors from the Endophyte Lasiodiplodia venezuelensis and Evaluation of Their Antivirulence Effects by Metabolomics

Cluster analysis of spatial patterns in Malaysian tree species

Coarse woody debris are buffering mortality-induced carbon losses to the atmosphere in tropical forests

Comparative metabolomic study of fungal foliar endophytes and their long-lived host Astrocaryum sciophilum: a model for exploring the chemodiversity of host-microbe interactions ⬇️

Comparing Classical Community Models: Theoretical Consequences for Patterns of Diversity

Comparing classical community models: theoretical consequences for patterns of diversity

Compositional response of Amazon forests to climate change ⬇️

Consistency of vegetation index seasonality across the Amazon rainforest

Continental-scale patterns of canopy tree composition and function across Amazonia.

Coping with branch excision when measuring leaf net photosynthetic rates in a lowland tropical forest

Corrigendum to “Andean orogeny and the diversification of lowland neotropical rain forest trees: A case study in Sapotaceae” [Global and Planetary Change 201 (2021) 103481]

Corrigendum to “Andean orogeny and the diversification of lowland neotropical rain forest trees: A case study in Sapotaceae” [Global and Planetary Change 201 (2021) 103481]

Coupling of ecosystem-scale plant water storage and leaf phenology observed by satellite

Critical Coarsening without Surface Tension: The Universality Class of the Voter Model

Decomposition in tropical forests: a pan-tropical study of the effects of litter type, litter placement and mesofaunal exclusion across a precipitation gradient

Decoupled leaf and stem economics in rain forest trees

Determinants and spatial modeling of tree β-diversity in a tropical forest landscape in Panama

Differences in volatile terpene composition between the bark and leaves of tropical tree species

Disentangling competitive vs. climatic drivers of tropical forest mortality

Diversity and carbon storage across the tropical forest biome ⬇️

Diversity of the volatile organic compounds emitted by 55 species of tropical trees: a survey in French Guiana.

Does climate directly influence NPP globally?

Does soil pyrogenic carbon determine plant functional traits in Amazon Basin forests? ⬇️

Drought Sensitivity of the Amazon Rainforest

Drought tolerance as predicted by leaf water potential at turgor loss point varies strongly across species within an Amazonian forest

Dry‐season decline in tree sapflux is correlated with leaf turgor loss point in a tropical rainforest

Dynamics and persistence in a metacommunity centred on the plantAntirrhinum majus: theoretical predictions and an empirical test

Dynamics of aboveground carbon stocks in a selectively logged tropical forest

Ecophylogenetics: advances and perspectives

Effect of tree demography and flexible root water uptake for modeling the carbon and water cycles of Amazonia

Environmental determinants of leaf litter ant community composition along an elevational gradient

Error propagation and scaling for tropical forest biomass estimates ⬇️

Error propagation and scaling for tropical forest biomass estimates

Estimation of biomass and carbon stocks: the case of the Atlantic Forest

Evidence for arrested succession in a liana-infested Amazonian forest ⬇️

Evolutionary diversity is associated with wood productivity in Amazonian forests

Evolutionary heritage influences Amazon tree ecology ⬇️

Evolutionary patterns of range size, abundance and species richness in Amazonian angiosperm trees

Evolutionary patterns of volatile terpene emissions across 202 tropical tree species

Fast demographic traits promote high diversification rates of Amazonian trees ⬇️

Fast determination of light availability and leaf area index in tropical forests

Field methods for sampling tree height for tropical forest biomass estimation. ⬇️

Floristic patterns and plant traits of Mediterranean communities in fragmented habitats

Forest degradation and biomass loss along the Chocó region of Colombia

Functional diversity improves tropical forest resilience: Insights from a long‐term virtual experiment

Functional recovery of secondary tropical forests

Functional trait variation and sampling strategies in species-rich plant communities

Functional traits of individual trees reveal ecological constraints on community assembly in tropical rain forests

Functional traits shape ontogenetic growth trajectories of rain forest tree species