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List of works by Ibrahim Halil Kavakli

A CLOCK-binding small molecule disrupts the interaction between CLOCK and BMAL1 and enhances circadian rhythm amplitude

scientific article published on 04 February 2020

A cartridge based sensor array platform for multiple coagulation measurements from plasma

scientific article published in January 2015

A novel BHLHE41 variant is associated with short sleep and resistance to sleep deprivation in humans

scientific article

Biocompatible Quantum Funnels for Neural Photostimulation

scientific article published on 14 August 2019

Centriolar satellites are required for efficient ciliogenesis and ciliary content regulation.

scientific article

Classification of cytochrome P450 inhibitors with respect to binding free energy and pIC50 using common molecular descriptors.

scientific article

Classification of drug molecules considering their IC50 values using mixed-integer linear programming based hyper-boxes method.

scientific article

Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism

scientific article published in April 2017

Clock Regulation of Metabolites Reveals Coupling between Transcription and Metabolism

scientific article published on 01 May 2017

Comparative RNA-seq analysis of the drought-sensitive lentil (Lens culinaris) root and leaf under short- and long-term water deficits

scientific article published on 18 April 2019

Computational and experimental investigation of DNA repair protein photolyase interactions with low molecular weight drugs.

scientific article published in July 2013

Correction: Investigation of Real-Time Photorepair Activity on DNA via Surface Plasmon Resonance.

scientific article published on 25 October 2012

Cryptochrome deletion in p53 mutant mice enhances apoptotic and anti-tumorigenic responses to UV damage at the transcriptome level

scientific article published on 01 May 2019

DNA repair by photolyases

scientific article published on 20 December 2018

Detection of human κ-opioid antibody using microresonators with integrated optical readout.

scientific article published on 11 June 2010

Directed molecular evolution of ADP-glucose pyrophosphorylase.

scientific article

Effective Neural Photostimulation Using Indium-Based Type-II Quantum Dots

scientific article published on 28 August 2018

Enhanced heterotetrameric assembly of potato ADP-glucose pyrophosphorylase using reverse genetics.

scientific article

Enhancement of the lipid productivity and fatty acid methyl ester profile of Chlorella vulgaris by two rounds of mutagenesis

scientific article published on 2 December 2017

Generation of up-regulated allosteric variants of potato ADP-glucose pyrophosphorylase by reversion genetics

scientific article

Glu-370 in the large subunit influences the substrate binding, allosteric, and heat stability properties of potato ADP-glucose pyrophosphorylase

scientific article published on 21 July 2016

IVT-seq reveals extreme bias in RNA sequencing

scientific article

Identification and Characterization of a New Class of (6-4) Photolyase from Vibrio cholerae

scientific article published on 15 October 2019

Investigation of Real-Time Photorepair Activity on DNA via Surface Plasmon Resonance

scientific article published on August 29, 2012

Investigation of subunit function in ADP-glucose pyrophosphorylase

scientific article published on 01 March 2001

Investigation of the interaction between the large and small subunits of potato ADP-glucose pyrophosphorylase

scientific article

Isolation and characterization of a higher plant ADP-glucose pyrophosphorylase small subunit homotetramer

scientific article published on 01 September 2000

MEMS biosensor for detection of Hepatitis A and C viruses in serum.

scientific article

MerR and ChrR mediate blue light induced photo-oxidative stress response at the transcriptional level in Vibrio cholerae

scientific article published on 18 January 2017

Microcantilever based disposable viscosity sensor for serum and blood plasma measurements

scientific article published on 20 July 2013

Molecular Aspects of Circadian Pharmacology and Relevance for Cancer Chronotherapy

scientific article published on 17 October 2017

Optimization based tumor classification from microarray gene expression data.

scientific article

Purification and characterization of five members of photolyase/cryptochrome family from Cyanidioschyzon merolae.

scientific article published on 14 October 2011

RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae.

scientific article published on 10 September 2016

Reduced Glucose Sensation Can Increase the Fitness of Saccharomyces cerevisiae Lacking Mitochondrial DNA.

scientific article published on 11 January 2016

Serologic Investigation of Hantavirus Infection in Patients with Previous Thrombocytopenia, and Elevated Urea and Creatinine Levels in an Epidemic Region of Turkey.

scientific article

The Arg293 of Cryptochrome1 is responsible for the allosteric regulation of CLOCK-CRY1 binding in circadian rhythm

scientific article published on 07 October 2020

The Photolyase/Cryptochrome Family of Proteins as DNA Repair Enzymes and Transcriptional Repressors.

scientific article published on 16 November 2016