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List of works by Søren M Karst

"Candidatus Propionivibrio aalborgensis": A Novel Glycogen Accumulating Organism Abundant in Full-Scale Enhanced Biological Phosphorus Removal Plants

scientific article published on 04 July 2016

A Critical Assessment of the Microorganisms Proposed to be Important to Enhanced Biological Phosphorus Removal in Full-Scale Wastewater Treatment Systems

scientific article

Back to Basics--The Influence of DNA Extraction and Primer Choice on Phylogenetic Analysis of Activated Sludge Communities.

scientific article published on 16 July 2015

Characterization of the First " Nitrotoga" Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria

scientific article published on 10 July 2018

Complete Genome Sequence of Actinobaculum schaalii Strain CCUG 27420.

scientific article published on 4 September 2014

Complete Genome Sequence of the Bacterium Aalborg_AAW-1, Representing a Novel Family within the Candidate Phylum SR1.

scientific article published on 11 June 2015

Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing

scientific article published on 31 March 2021

Culture-Independent Analyses Reveal Novel Anaerolineaceae as Abundant Primary Fermenters in Anaerobic Digesters Treating Waste Activated Sludge

scientific article

Cyanate as an energy source for nitrifiers

scientific article

Functional redundancy ensures performance robustness in 3-stage PHA-producing mixed cultures under variable feed operation.

scientific article published on 21 August 2017

Genomic and in Situ Analyses Reveal the Micropruina spp. as Abundant Fermentative Glycogen Accumulating Organisms in Enhanced Biological Phosphorus Removal Systems.

scientific article published on 23 May 2018

Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge

scientific article published on 23 February 2016

Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters

scientific article

Low temperature partial nitritation/anammox in a moving bed biofilm reactor treating low strength wastewater.

scientific article published on 16 July 2014

Metagenomes from deep Baltic Sea sediments reveal how past and present environmental conditions determine microbial community composition

scientific article published on 12 August 2017

MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups.

scientific article

MiDAS: the field guide to the microbes of activated sludge.

scientific article published on 27 June 2015

Novel prosthecate bacteria from the candidate phylum Acetothermia

scientific article published on 08 June 2018

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

scientific article published in 2022

Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias.

scientific article published in January 2018

Survival and activity of individual bioaugmentation strains.

scientific article

The impact of immigration on microbial community composition in full-scale anaerobic digesters

scientific article published on 24 August 2017

The role of inoculum and reactor configuration for microbial community composition and dynamics in mainstream partial nitritation anammox reactors.

scientific article published on 10 March 2017

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