List of works - Jong Kyoung Kim

Accounting for technical noise in single-cell RNA-seq experiments.

scientific article published on 22 September 2013

Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression

scientific article

Classification of low quality cells from single-cell RNA-seq data

scientific article published on 17 February 2016

Corrigendum: Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression

scientific article published on 11 January 2016

Distinct properties of adipose stem cell subpopulations determine fat depot-specific characteristics

Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression

scientific article

Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation.

scientific article

Homeostatic serum IgE is secreted by plasma cells in the thymus and enhances mast cell survival

scientific article published on 17 March 2022

Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices

scientific article published on 19 December 2011

Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data

scientific article

NFκB and STAT3 synergistically activate the expression of FAT10, a gene counteracting the tumor suppressor p53.

scientific article published on 24 January 2014

Prediction and experimental validation of novel STAT3 target genes in human cancer cells

scientific article

Probabilistic models for semisupervised discriminative motif discovery in DNA sequences

scientific article

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

scientific article

Single-cell RNA sequencing identifies shared differentiation paths of mouse thymic innate T cells

scientific article published on 31 August 2020

Stella modulates transcriptional and endogenous retrovirus programs during maternal-to-zygotic transition.

scientific article

The International Mouse Phenotyping Consortium (IMPC): a functional catalogue of the mammalian genome that informs conservation

scientific article published on 19 May 2018

The technology and biology of single-cell RNA sequencing

scientific article

Wnt3a disrupts GR-TEAD4-PPARγ2 positive circuits and cytoskeletal rearrangement in a β-catenin-dependent manner during early adipogenesis

scholarly article by Bongju Park et al published 8 January 2019 in Cell Death and Disease

List of works by Jong Kyoung Kim

Accounting for technical noise in single-cell RNA-seq experiments.

Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression

Classification of low quality cells from single-cell RNA-seq data

Corrigendum: Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression

Distinct properties of adipose stem cell subpopulations determine fat depot-specific characteristics

Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression

Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation.

Homeostatic serum IgE is secreted by plasma cells in the thymus and enhances mast cell survival

Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices

Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data

NFκB and STAT3 synergistically activate the expression of FAT10, a gene counteracting the tumor suppressor p53.

Prediction and experimental validation of novel STAT3 target genes in human cancer cells

Probabilistic models for semisupervised discriminative motif discovery in DNA sequences

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

Single-cell RNA sequencing identifies shared differentiation paths of mouse thymic innate T cells

Stella modulates transcriptional and endogenous retrovirus programs during maternal-to-zygotic transition.

The International Mouse Phenotyping Consortium (IMPC): a functional catalogue of the mammalian genome that informs conservation

The technology and biology of single-cell RNA sequencing

Wnt3a disrupts GR-TEAD4-PPARγ2 positive circuits and cytoskeletal rearrangement in a β-catenin-dependent manner during early adipogenesis