List of works - Donna K Slonim

A YAC-based physical map of the mouse genome.

scientific article

Amniotic fluid RNA gene expression profiling provides insights into the phenotype of Turner syndrome.

scientific article

Amniotic fluid transcriptomics reflects novel disease mechanisms in fetuses with myelomeningocele

scientific article

Assessment of network module identification across complex diseases

scientific article published on 30 August 2019

Building Human Genome Maps with Radiation Hybrids ⬇️

scientific article published on January 1, 1997

CSAX: Characterizing Systematic Anomalies in eXpression Data.

scientific article

Connectedness of PPI network neighborhoods identifies regulatory hub proteins.

scientific article

DFLAT: functional annotation for human development

scientific article

Disease-associated expression profiles in peripheral blood mononuclear cells from patients with advanced renal cell carcinoma.

scientific article published on September 2003

Evaluating between-pathway models with expression data

scientific article

Evaluation of normalization procedures for oligonucleotide array data based on spiked cRNA controls ⬇️

scientific article published on November 21, 2001

FRaC: a feature-modeling approach for semi-supervised and unsupervised anomaly detection

scientific article

Finding novel molecular connections between developmental processes and disease.

scientific article

From patterns to pathways: gene expression data analysis comes of age.

scientific article

Functional genomic analysis of amniotic fluid cell-free mRNA suggests that oxidative stress is significant in Down syndrome fetuses

scientific article

Gene expression analysis in pregnant women and their infants identifies unique fetal biomarkers that circulate in maternal blood.

scientific article

Getting started in gene expression microarray analysis

scientific article

Guest Editors’ Introduction: Selected Papers from ACM-BCB 2013

scientific article published on 01 January 2015

High throughput interaction data reveals degree conservation of hub proteins.

scientific article

Novel neurodevelopmental information revealed in amniotic fluid supernatant transcripts from fetuses with trisomies 18 and 21.

scientific article

Pairing of competitive and topologically distinct regulatory modules enhances patterned gene expression.

scientific article

Personal microbiomes and next-generation sequencing for laboratory-based education.

scientific article published on 16 November 2016

Putting benchmarks in their rightful place: The heart of computational biology

scientific article published on 8 November 2018

Radiation hybrid map of the mouse genome

scientific article published on 01 August 1999

Risk factors associated with beta-amyloid(1-42) immunotherapy in preimmunization gene expression patterns of blood cells.

scientific article published in October 2005

Synthetic lethal analysis of Caenorhabditis elegans posterior embryonic patterning genes identifies conserved genetic interactions

scientific article

The amniotic fluid transcriptome: a source of novel information about human fetal development

scientific article published on January 2012

The fetal brain transcriptome and neonatal behavioral phenotype in the Ts1Cje mouse model of Down syndrome.

scientific article

The pathway not taken: understanding 'omics data in the perinatal context

scientific article

Time is Money: Designing Cost-Effective Time Series Experiments.

scientific article

Toward the dynamic interactome: it's about time

scientific article

Towards a more molecular taxonomy of disease

scientific article

Transcriptional profiling in cancer: the path to clinical pharmacogenomics.

scientific article

Transcriptomic analysis of cell-free fetal RNA suggests a specific molecular phenotype in trisomy 18 ⬇️

scientific article published on December 9, 2010

Using Next-Generation Sequencing to Explore Genetics and Race in the High School Classroom ⬇️

scientific article

List of works by Donna K Slonim

A YAC-based physical map of the mouse genome.

Amniotic fluid RNA gene expression profiling provides insights into the phenotype of Turner syndrome.

Amniotic fluid transcriptomics reflects novel disease mechanisms in fetuses with myelomeningocele

Assessment of network module identification across complex diseases

Building Human Genome Maps with Radiation Hybrids ⬇️

CSAX: Characterizing Systematic Anomalies in eXpression Data.

Connectedness of PPI network neighborhoods identifies regulatory hub proteins.

DFLAT: functional annotation for human development

Disease-associated expression profiles in peripheral blood mononuclear cells from patients with advanced renal cell carcinoma.

Evaluating between-pathway models with expression data

Evaluation of normalization procedures for oligonucleotide array data based on spiked cRNA controls ⬇️

FRaC: a feature-modeling approach for semi-supervised and unsupervised anomaly detection

Finding novel molecular connections between developmental processes and disease.

From patterns to pathways: gene expression data analysis comes of age.

Functional genomic analysis of amniotic fluid cell-free mRNA suggests that oxidative stress is significant in Down syndrome fetuses

Gene expression analysis in pregnant women and their infants identifies unique fetal biomarkers that circulate in maternal blood.

Getting started in gene expression microarray analysis

Guest Editors’ Introduction: Selected Papers from ACM-BCB 2013

High throughput interaction data reveals degree conservation of hub proteins.

Novel neurodevelopmental information revealed in amniotic fluid supernatant transcripts from fetuses with trisomies 18 and 21.

Pairing of competitive and topologically distinct regulatory modules enhances patterned gene expression.

Personal microbiomes and next-generation sequencing for laboratory-based education.

Putting benchmarks in their rightful place: The heart of computational biology

Radiation hybrid map of the mouse genome

Risk factors associated with beta-amyloid(1-42) immunotherapy in preimmunization gene expression patterns of blood cells.

Synthetic lethal analysis of Caenorhabditis elegans posterior embryonic patterning genes identifies conserved genetic interactions

The amniotic fluid transcriptome: a source of novel information about human fetal development

The fetal brain transcriptome and neonatal behavioral phenotype in the Ts1Cje mouse model of Down syndrome.

The pathway not taken: understanding 'omics data in the perinatal context

Time is Money: Designing Cost-Effective Time Series Experiments.

Toward the dynamic interactome: it's about time

Towards a more molecular taxonomy of disease

Transcriptional profiling in cancer: the path to clinical pharmacogenomics.

Transcriptomic analysis of cell-free fetal RNA suggests a specific molecular phenotype in trisomy 18 ⬇️

Using Next-Generation Sequencing to Explore Genetics and Race in the High School Classroom ⬇️