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List of works by Benilton Carvalho

A Prediction Algorithm for Drug Response in Patients with Mesial Temporal Lobe Epilepsy Based on Clinical and Genetic Information

scientific article

A field guide to cultivating computational biology

scientific article published on 08 October 2021

A framework for oligonucleotide microarray preprocessing.

scientific article

A multilevel model to address batch effects in copy number estimation using SNP arrays.

scientific article

Arterial Stiffness Is Associated With Regional Ventricular Systolic and Diastolic Dysfunction

Blood transcriptome profile induced by an efficacious vaccine formulated with salivary antigens from cattle ticks

scientific article published on 18 December 2019

Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and conserved intergenic sequences

scientific article

Circulating lymphocytes and monocytes transcriptomic analysis of patients with type 2 diabetes mellitus, dyslipidemia and periodontitis

scientific article published on 18 May 2020

Combined Analysis of SNP Array Data Identifies Novel CNV Candidates and Pathways in Ependymoma and Mesothelioma

scientific article

Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips

scientific article published on 8 March 2011

Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer

scientific article

Comprehensive Molecular Characterization of Muscle-Invasive Bladder Cancer

scientific article published on 01 August 2018

Comprehensive high-throughput arrays for relative methylation (CHARM).

scientific article

Cyclooxygenase-1 as a Potential Therapeutic Target for Seizure Suppression: Evidences from Zebrafish Pentylenetetrazole-Seizure Model.

scientific article published on 15 November 2016

Distribution of local ancestry and evidence of adaptation in admixed populations

scientific article published on 25 September 2019

Dysregulation of NEUROG2 plays a key role in focal cortical dysplasia.

scientific article published on 20 February 2018

Estimating genome-wide copy number using allele-specific mixture models

scientific article published on September 2008

Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data

scientific article

Genome-wide copy number alterations detection in fresh frozen and matched FFPE samples using SNP 6.0 arrays

scientific article published on 01 November 2008

Geographical and intrapopulation variation in the diet of a threatened marine predator,<i>Pontoporia blainvillei</i>(Cetacea)

scientific article published in 2017

HPexome: An automated tool for processing whole-exome sequencing data

scientific article published in January 2020

Identification of common and divergent gene expression signatures in patients with venous and arterial thrombosis using data from public repositories

scientific article published on 11 August 2020

MicroRNA hsa-miR-134 is a circulating biomarker for mesial temporal lobe epilepsy.

scientific article

MicroRNAs-424 and 206 are potential prognostic markers in spinal onset amyotrophic lateral sclerosis.

scientific article published on 22 June 2016

Multimodal Analysis of Missense Variants Improves Interpretation of Clinically Relevant Variants in Dravet Syndrome

scientific article published on 28 March 2019

Orchestrating high-throughput genomic analysis with Bioconductor

scientific article

Ordering of mutations in preinvasive disease stages of esophageal carcinogenesis.

scientific article

Performance assessment of copy number microarray platforms using a spike-in experiment.

scientific article

Quantifying uncertainty in genotype calls

scientific article

R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips.

scientific article published on 06 August 2009

RNA sequencing reveals region-specific molecular mechanisms associated with epileptogenesis in a model of classical hippocampal sclerosis

scientific article

Reply

Resting heart rate as predictor for left ventricular dysfunction and heart failure: MESA (Multi-Ethnic Study of Atherosclerosis).

scientific article

Role of a genetic variation in the microRNA-4421 binding site of ERP29 regarding risk of oropharynx cancer and prognosis

scientific article published on 12 October 2020

Rqc : A Bioconductor Package for Quality Control of High-Throughput Sequencing Data

scientific article published in 2018

Statistical Estimation of Surface Heat Control and Exchange in Endotherms

scholarly article published in 2018

Subclinical Atherosclerosis and Incipient Regional Myocardial Dysfunction in Asymptomatic Individuals

article published in 2006

The Brazilian Initiative on Precision Medicine (BIPMed): fostering genomic data-sharing of underrepresented populations

scientific article published on 02 October 2020

The challenges of delivering bioinformatics training in the analysis of high-throughput data ⬇️

scientific article published on March 29, 2013

The influence of left ventricular size and global function on regional myocardial contraction and relaxation in an adult population free of cardiovascular disease: a tagged CMR study of the MESA cohort

scientific article published in January 2007

Transcriptomic analysis of the subiculum region of the hippocampus in animals with temporal lobe epilepsy (ELTM) induced by pilocarpine

scholarly article

Using the R Package crlmm for Genotyping and Copy Number Estimation.

scientific article published on May 2011

Validation and extension of an empirical Bayes method for SNP calling on Affymetrix microarrays

scientific article

Working with Oligonucleotide Arrays.

scientific article published on January 2016

snoRNA and piRNA expression levels modified by tobacco use in women with lung adenocarcinoma

scientific article

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