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List of works by Mark Morrison

A Natural History of Actinic Keratosis and Cutaneous Squamous Cell Carcinoma Microbiomes

scientific article published on 09 October 2018

A Phylogenomic Analysis of the Bacterial Phylum Fibrobacteres

scientific article

A Vegetarian Diet Is a Major Determinant of Gut Microbiota Composition in Early Pregnancy

scientific article published on 12 July 2018

A meta-analysis of the microbial diversity observed in anaerobic digesters ⬇️

scientific article published on December 3, 2010

An (Anti)-Inflammatory Microbiota: Defining the Role in Inflammatory Bowel Disease?

scientific article

An efficient RNA extraction method for estimating gut microbial diversity by polymerase chain reaction

scientific article published on 22 January 2009

Analysis of the bovine rumen microbiome reveals a diversity of Sus-like polysaccharide utilization loci from the bacterial phylum Bacteroidetes

scientific article published on 22 January 2014

Ascites bacterial burden and immune cell profile are associated with poor clinical outcomes in the absence of overt infection

scientific article

Association between specific mucosa-associated microbiota in Crohn's disease at the time of resection and subsequent disease recurrence: a pilot study.

scientific article

Bacterial census of poultry intestinal microbiome.

scientific article published on March 2013

Biochemical characterization and relative expression levels of multiple carbohydrate esterases of the xylanolytic rumen bacterium Prevotella ruminicola 23 grown on an ester-enriched substrate.

scientific article

Breastfeeding: a key modulator of gut microbiota characteristics in late infancy

scientific article published on 19 November 2018

Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus

scientific article published on 17 October 2008

Characterisation of the gastrointestinal mucosa-associated microbiota: a novel technique to prevent cross-contamination during endoscopic procedures

scientific article

Characterization of the gastrointestinal microbiota in health and inflammatory bowel disease.

scientific article published on 20 May 2011

Chronic High-Fat Diet Induces Early Barrett's Esophagus in Mice through Lipidome Remodeling

scientific article published on 16 May 2020

Comparisons of different hypervariable regions of rrs genes for use in fingerprinting of microbial communities by PCR-denaturing gradient gel electrophoresis.

scientific article published on August 2004

Connections Between the Gut Microbiome and Metabolic Hormones in Early Pregnancy in Overweight and Obese Women

scientific article

Contributions of the maternal oral and gut microbiome to placental microbial colonization in overweight and obese pregnant women

scientific article

Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size

article

Dairy and plant based food intakes are associated with altered faecal microbiota in 2 to 3 year old Australian children

scientific article

Development and application of real-time PCR assays for quantification of erm genes conferring resistance to macrolides-lincosamides-streptogramin B in livestock manure and manure management systems

scientific article

Development and application of real-time PCR assays for quantification of genes encoding tetracycline resistance.

scientific article

Development of Multiwell-Plate Methods Using Pure Cultures of Methanogens To Identify New Inhibitors for Suppressing Ruminant Methane Emissions.

scientific article

Development of a phylogenetic microarray for comprehensive analysis of ruminal bacterial communities.

scientific article

Diet and the Microbiome

scientific article published on 4 January 2017

Dietary fiber intervention on gut microbiota composition in healthy adults: a systematic review and meta-analysis.

scientific article published on 11 May 2018

Differences down-under: alcohol-fueled methanogenesis by archaea present in Australian macropodids

scientific article published on 29 March 2016

Do ruminal bacteria exchange genetic material?

scientific article published on August 1996

Draft Genome Sequence of Bacteroides vulgatus PC510, a Strain Isolated from Human Feces ⬇️

scientific article published on May 27, 2011

Draft Genome Sequence of Turicibacter sanguinis PC909, Isolated from Human Feces ⬇️

scientific article published on December 23, 2010

Duodenal bacterial load as determined by quantitative polymerase chain reaction in asymptomatic controls, functional gastrointestinal disorders and inflammatory bowel disease

scientific article published on 15 May 2020

Dyspepsia and the microbiome: time to focus on the small intestine

scientific article

Effect of food additives on key bacterial taxa and the mucosa-associated microbiota in Crohn’s disease. The ENIGMA study

scientific article published in 2023

Effect of soybean hulls, soy lecithin, and soapstock mixtures on ruminal fermentation and milk composition in dairy cows

scientific article published on 01 February 1998

Effects of feeding fiber-fermenting bacteria to pigs on nutrient digestion, fecal output, and plasma energy metabolites

scientific article published on 01 November 2012

Electricity generation from cellulose by rumen microorganisms in microbial fuel cells.

scientific article published in August 2007

Emerging pathogenic links between microbiota and the gut-lung axis.

scientific article

Enterococcus faecalis AHG0090 is a Genetically Tractable Bacterium and Produces a Secreted Peptidic Bioactive that Suppresses Nuclear Factor Kappa B Activation in Human Gut Epithelial Cells.

scientific article

Evaluation of different partial 16S rRNA gene sequence regions for phylogenetic analysis of microbiomes.

scientific article

Evaluation of subsampling-based normalization strategies for tagged high-throughput sequencing data sets from gut microbiomes

scientific article

Evaluations of different hypervariable regions of archaeal 16S rRNA genes in profiling of methanogens by Archaea-specific PCR and denaturing gradient gel electrophoresis.

scientific article

Food Starch Structure Impacts Gut Microbiome Composition.

scientific article

Functional gene analysis suggests different acetogen populations in the bovine rumen and tammar wallaby forestomach.

scientific article

Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion.

scientific article published on 16 November 2017

Genome Sequence of Stenotrophomonas maltophilia Strain AU12-09, Isolated from an Intravascular Catheter.

scientific article published on 2 May 2013

Genome sequence of Staphylococcus epidermidis strain AU12-03, isolated from an intravascular catheter.

scientific article published on December 2012

Genomic characterization of the uncultured Bacteroidales family S24-7 inhabiting the guts of homeothermic animals

scientific article

Genomic differences between Fibrobacter succinogenes S85 and Fibrobacter intestinalis DR7, identified by suppression subtractive hybridization.

scientific article published on 21 December 2007

Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

scientific article published in August 2014

Growth and protein-rich food intake in infancy is associated with fat-free mass index at 2-3 years of age.

scientific article published in March 2018

Highlighting new phylogenetic specificities of Crohn's disease microbiota.

scientific article

Identification of metabolically active proteobacterial and archaeal communities in the rumen by DNA- and RNA-derived 16S rRNA gene.

scientific article

Impact of ethnicity, geography, and disease on the microbiota in health and inflammatory bowel disease

scientific article

Improved serial analysis of V1 ribosomal sequence tags (SARST-V1) provides a rapid, comprehensive, sequence-based characterization of bacterial diversity and community composition

scientific article published on 01 April 2006

Increased Systolic and Diastolic Blood Pressure Is Associated With Altered Gut Microbiota Composition and Butyrate Production in Early Pregnancy

scientific article published on 15 August 2016

Inflammasome signaling affects anxiety- and depressive-like behavior and gut microbiome composition

scientific article published on 19 April 2016

Influence of cigarette smoking on the human duodenal mucosa-associated microbiota

scientific article published on 29 August 2018

Investigation of a new acetogen isolated from an enrichment of the tammar wallaby forestomach

scientific article

Is There a Link Between H. Pylori and the Epidemiology of Crohn's Disease?

scientific article

Isolation of Genetically Tractable Most-Wanted Bacteria by Metaparental Mating

scientific article published on 21 August 2015

Letter: inverse correlation betweenHelicobacter pyloriand obesity - a conclusion too early? Authors' reply

scientific article published on 01 November 2014

Letter: investigating the intestinal mucosa-associated microbiota - relevance and potential pitfalls. Authors' reply

scientific article published in September 2016

Looking large, to make more, out of gut metagenomics

scientific article

Low dietary fiber intake increases Collinsella abundance in the gut microbiota of overweight and obese pregnant women.

scientific article

Male-specific Association Between Fat-Free Mass Index and Fecal Microbiota in 2- to 3-Year-Old Australian Children

scientific article published on 17 October 2017

Metagenomic insights into the carbohydrate-active enzymes carried by the microorganisms adhering to solid digesta in the rumen of cows.

scientific article

Microbial biofilms associated with intravascular catheter-related bloodstream infections in adult intensive care patients.

scientific article

Microbial diversity on intravascular catheters from paediatric patients.

scientific article published on 29 October 2015

Molecular investigation of bacterial communities on intravascular catheters: no longer just Staphylococcus

scientific article

Mothers Secretor Status Affects Development of Childrens Microbiota Composition and Function: A Pilot Study.

scientific article published on 19 September 2016

Muramidases found in the foregut microbiome of the Tammar wallaby can direct cell aggregation and biofilm formation.

scientific article

New Insights into the Diversity of the Genus Faecalibacterium

scientific article published on 22 September 2017

No evidence for persistent enterovirus infection in cattle with end-stage idiopathic dilated cardiomyopathy

scientific article published on 01 December 2003

Numerical ecology validates a biogeographical distribution and gender-based effect on mucosa-associated bacteria along the human colon ⬇️

scientific article published on December 2, 2010

Occurrence and persistence of erythromycin resistance genes (erm) and tetracycline resistance genes (tet) in waste treatment systems on swine farms.

scientific article published on 6 February 2010

Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics.

scientific article published on December 2003

Oral Microbiome: A New Biomarker Reservoir for Oral and Oropharyngeal Cancers.

scientific article published on 26 September 2017

Overestimation of the abundance of sulfate-reducing bacteria in human feces by quantitative PCR targeting the Desulfovibrio 16S rRNA gene

scientific article

Partial purification and characterization of Ral8I, a class-IIS restriction endonuclease from Ruminococcus albus 8 which recognizes 5'-GGATC

scientific article published on 01 February 1992

Pathophysiology of Functional Gastrointestinal Disorders: A Holistic Overview.

scientific article published on 8 February 2018

Persistence of resistance to erythromycin and tetracycline in swine manure during simulated composting and lagoon treatments.

scientific article

Phenylacetic and phenylpropionic acids do not affect xylan degradation by Ruminococcus albus

scientific article

Phylogenetic diversity of bacterial communities in bovine rumen as affected by diets and microenvironments ⬇️

scientific article published on September 8, 2011

Plasmacytoid dendritic cells protect from viral bronchiolitis and asthma through semaphorin 4a-mediated T reg expansion

scientific article published on 22 December 2017

Proteus spp. as Putative Gastrointestinal Pathogens

scientific article published on 13 June 2018

Review article: Associations between Helicobacter pylori and obesity--an ecological study

scientific article

Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains.

scientific article

Rumen ciliated protozoa decrease generation time and adjust 18S ribosomal DNA copies to adapt to decreased transfer interval, starvation, and monensin.

scientific article

Ruminal nitrogen metabolism: perspectives for integration of microbiology and nutrition for dairy.

scientific article published on June 2007

Ruminococcus albus 8 mutants defective in cellulose degradation are deficient in two processive endocellulases, Cel48A and Cel9B, both of which possess a novel modular architecture

scientific article

SYNbiotics Easing Renal failure by improving Gut microbiologY (SYNERGY): a protocol of placebo-controlled randomised cross-over trial

scientific article

Selected antimicrobial resistance during composting of manure from cattle administered sub-therapeutic antimicrobials

scientific article published on 6 February 2009

Shifts in microbial community structure of granular and liquid biomass in response to changes to infeed and digester design in anaerobic digesters receiving food-processing wastes.

scientific article

Skin Cancer-Associated <i>S. aureus</i> Strains Can Induce DNA Damage in Human Keratinocytes by Downregulating DNA Repair and Promoting Oxidative Stress

scientific article published on 25 April 2022

Status of the phylogenetic diversity census of ruminal microbiomes.

scientific article

Strategy for modular tagged high-throughput amplicon sequencing.

scientific article

Subcellular distribution of glycanases and related components in Ruminococcus albus SY3 and their role in cell adhesion to cellulose

scientific article published on 01 October 2001

Synbiotics Easing Renal Failure by Improving Gut Microbiology (SYNERGY): A Randomized Trial.

scientific article published on 15 January 2016

Systematic Review and Meta-Analysis: Prevalence of Small Intestinal Bacterial Overgrowth in Chronic Liver Disease.

scientific article

Technical note: Occurrence in fecal microbiota of genes conferring resistance to both macrolide-lincosamide-streptogramin B and tetracyclines concomitant with feeding of beef cattle with tylosin.

scientific article published on 9 May 2008

The Effects from DNA Extraction Methods on the Evaluation of Microbial Diversity Associated with Human Colonic Tissue ⬇️

scientific article published on December 14, 2010

The NAD(P)H-utilizing glutamate dehydrogenase of Bacteroides thetaiotaomicron belongs to enzyme family I, and its activity is affected by trans-acting gene(s) positioned downstream of gdhA

scientific article published on December 1996

The Performance of an Oral Microbiome Biomarker Panel in Predicting Oral Cavity and Oropharyngeal Cancers

scientific article published on 03 August 2018

The Ruminococcus albus pilA1-pilA2 locus: expression and putative role of two adjacent pil genes in pilus formation and bacterial adhesion to cellulose.

scientific article published in April 2005

The glutamine synthetase of Prevotella bryantii B(1)4 is a family III enzyme (GlnN) and glutamine supports growth of mutants lacking glutamate dehydrogenase activity.

scientific article

The gut bacterium and pathobiont Bacteroides vulgatus activates NF-κB in a human gut epithelial cell line in a strain and growth phase dependent manner.

scientific article

The restriction endonuclease RflFII, isolated from Ruminococcus flavefaciens FD-1, recognizes the sequence 5'-AGTACT-3', and is inhibited by site-specific adenine methylation

scientific article published on 01 September 1994

The saliva microbiome profiles are minimally affected by collection method or DNA extraction protocols.

scientific article published on 17 August 2017

Towards an integrated understanding of the therapeutic utility of exclusive enteral nutrition in the treatment of Crohn's disease

scientific article

Translating our microbiome into medicine

scientific article published on 01 April 2017

Two SusD-like proteins encoded within a polysaccharide utilization locus of an uncultured ruminant Bacteroidetes phylotype bind strongly to cellulose.

scientific article published on 8 June 2012

ZAP-70 genotype disrupts the relationship between microbiota and host, leading to spondyloarthritis and ileitis in SKG mice.

scientific article

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