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List of works by Jason Swedlow

A 3D cellular context for the macromolecular world.

scientific article

A call for public archives for biological image data

scientific article published on 01 November 2018

A global view of standards for open image data formats and repositories

scientific article published on 04 May 2021

A novel reporter of notch signalling indicates regulated and random notch activation during vertebrate neurogenesis ⬇️

scientific article published on August 31, 2011

A role for the Adenomatous Polyposis Coli protein in chromosome segregation

scientific article

A workingperson's guide to deconvolution in light microscopy

scientific article

Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast.

scientific article

Advanced hardware and software tools for fast multidimensional imaging of living cells

scientific article

An open data ecosystem for cell migration research

scientific article

Analysis of global RNA synthesis at the single cell level following hypoxia

scientific article

Association of p60c-src with endosomal membranes in mammalian fibroblasts

scientific article published on July 1992

Association of the amino-terminal half of c-Src with focal adhesions alters their properties and is regulated by phosphorylation of tyrosine 527.

scientific article

At the (kineto)chore, yeast really are like people

scientific article

Aurora B regulates MCAK at the mitotic centromere

scientific article

Author Correction: QUAREP-LiMi: a community endeavor to advance quality assessment and reproducibility in light microscopy

correction of a scholarly article

BOD1 Is Required for Cognitive Function in Humans and Drosophila.

scientific article

Bioimage informatics for experimental biology

scientific article (publication date: 2009)

Biological imaging software tools

scientific article published on 28 June 2012

Bod1 regulates protein phosphatase 2A at mitotic kinetochores

scientific article

Bringing Open Data to Whole Slide Imaging

scientific article published on 01 April 2019

Building a scientific data grid with DiGS.

scientific article

Building bridges between cellular and molecular structural biology

scientific article

CDK-dependent phosphorylation of PHD1 on serine 130 alters its substrate preference in cells

scientific article published on 7 December 2015

Cajal body dynamics and association with chromatin are ATP-dependent

scientific article

Cell biology forum: Genome-wide view of mitosis.

scientific article published in April 2010

Channeling the data deluge

scientific article

Characterization of nuclear polyadenylated RNA-binding proteins in Saccharomyces cerevisiae.

scientific article

Chemical approaches to understanding biological mechanisms

scientific article

Chromatin-associated Protein Phosphatase 1 Regulates Aurora-B and Histone H3 Phosphorylation

scientific article published in Journal of Biological Chemistry

Chromosome condensation: DNA compaction in real time

scientific article published in July 2004

Chromosome structure inside the nucleus

scientific article

Community standards for open cell migration data

scientific article published on 01 May 2020

Compounds enhancing human sperm motility identified using a high-throughput phenotypic screening platform

scientific article published on 07 January 2022

Data management challenges in three-dimensional EM.

scientific article

Deconvolution Fluorescence Light Microscopy

Defining interactions and distributions of cadherin and catenin complexes in polarized epithelial cells.

scientific article published in June 1994

Deglycosylation of gonadotropins with an endoglycosidase

scientific article published in March 1986

Development of the Minimum Information Specification for In Situ Hybridization and Immunohistochemistry Experiments (MISFISHIE).

scientific article published on January 2006

Dispersion, aberration and deconvolution in multi-wavelength fluorescence images

scientific article

Dynamics of the nucleus

scientific article

ELYS/MEL-28 chromatin association coordinates nuclear pore complex assembly and replication licensing

scientific article published on 6 September 2007

Evaluating performance in three-dimensional fluorescence microscopy

scientific article published on December 2007

Finding an image in a haystack: the case for public image repositories

scientific article published on 01 March 2011

Fixation of Drosophila Tissues for Immunofluorescence ⬇️

scientific article published on August 1, 2011

Focal points for chromosome condensation and decondensation revealed by three-dimensional in vivo time-lapse microscopy

scientific article

Full volume super-resolution imaging of thick mitotic spindle using 3D AO STED microscope

scientific article published on 25 March 2019

Fuzzy sequences, specific attachments? Chromosome dynamics

scientific article published on May 1996

Germ cell-less encodes a cell type-specific nuclear pore-associated protein and functions early in the germ-cell specification pathway of Drosophila

scientific article published in September 1994

High-resolution live imaging of cell behavior in the developing neuroepithelium

scientific article published on 12 April 2012

How to be a mitotic chromosome

scientific article

Human CLASP1 is an outer kinetochore component that regulates spindle microtubule dynamics

scientific article

Immunolabeling of Drosophila Embryos and Tissues ⬇️

scientific article published on August 1, 2011

In Vivo Imaging of Mammalian Cells: Image Acquisition and Analysis

scientific article published on 01 September 2009

In vivo analysis of Cajal body movement, separation, and joining in live human cells

scientific article

In vivo imaging of mammalian cells: cell engineering and viability

scientific article published in September 2009

Informatics and quantitative analysis in biological imaging

scientific article

Innovation in biological microscopy: Current status and future directions ⬇️

scientific article published on March 12, 2012

Interphase chromosomes undergo constrained diffusional motion in living cells

scientific article

Isolation and characterization of three forms of luteinizing hormone from the pituitary gland of the horse

scientific article published on 01 April 1986

Killing with proficiency: Integrated post-translational regulation of an offensive Type VI secretion system

scholarly article published by Jun Jie Wong in 2018

Kinetochore alignment within the metaphase plate is regulated by centromere stiffness and microtubule depolymerases

scientific article

Live cell imaging using wide-field microscopy and deconvolution

scientific article

MITI minimum information guidelines for highly multiplexed tissue images

scientific article published on 01 March 2022

Macromolecular mobility inside the cell nucleus

article

Measuring tubulin content in Toxoplasma gondii: a comparison of laser-scanning confocal and wide-field fluorescence microscopy

scientific article

Metadata management for high content screening in OMERO

scientific article

Metadata matters: access to image data in the real world

scientific article (publication date: 31 May 2010)

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

scientific article

Mitotic mechanics: the auroras come into view

scientific article published on December 2003

Mitotic spindle orientation distinguishes stem cell and terminal modes of neuron production in the early spinal cord

scientific article published in May 2007

Modelling data across labs, genomes, space and time

scientific article

Multiple chromosomal populations of topoisomerase II detected in vivo by time-lapse, three-dimensional wide-field microscopy

scientific article published in April 1993

Nuclear dynamics: where genes are and how they got there

scientific article

Nucleome Browser: an integrative and multimodal data navigation platform for 4D Nucleome

scientific article published in 2022

Numerically Enhanced Stimulated Emission Depletion Microscopy with Adaptive Optics for Deep-Tissue Super-Resolved Imaging

scientific article published on 20 December 2019

OME Core Ontology: An OWL-based Life Science Imaging Data Model ⬇️

OME Files - An open source reference library for the OME-XML metadata model and the OME-TIFF file format

OME-NGFF: a next-generation file format for expanding bioimaging data-access strategies

scientific article published on 29 November 2021

OME-Zarr: a cloud-optimized bioimaging file format with international community support

scientific article published in 2023

OMERO: flexible, model-driven data management for experimental biology

scientific article

OMX: a new platform for multimodal, multichannel wide-field imaging.

scientific article

On Bringing Bioimaging Data into the Open (World) ⬇️

Open source bioimage informatics for cell biology

scientific article (publication date: November 2009)

Open tools for storage and management of quantitative image data

scientific article

Optimisation of the two-dimensional gel electrophoresis protocol using the Taguchi approach

scientific article

PHD1 links cell-cycle progression to oxygen sensing through hydroxylation of the centrosomal protein Cep192

scientific article

Phosphorylated DegU manipulates cell fate differentiation in the Bacillus subtilis biofilm

scientific article

Phosphorylation by aurora-B negatively regulates survivin function during mitosis.

scientific article published on 21 May 2007

Phosphorylation of threonine 156 of the mu2 subunit of the AP2 complex is essential for endocytosis in vitro and in vivo

scientific article published in June 2001

Phosphorylation regulates the dynamic interaction of RCC1 with chromosomes during mitosis

scientific article

Pineal N-acetyltransferase activity in 10-day-old rats: a paradigm for studying the developing circadian system

scientific article published in September 1984

Publisher Correction: Image Data Resource: a bioimage data integration and publication platform

scholarly article by Eleanor Williams published in October 2018

Publishing and sharing multi-dimensional image data with OMERO

scientific article

QUAREP-LiMi: a community endeavor to advance quality assessment and reproducibility in light microscopy

scientific article published on 21 May 2021

QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy

scientific article published on 02 July 2021

Quantitative Analysis of Digital Microscope Images

article

Quantitative Fluorescence Microscopy and Image Deconvolution

scientific article published on 01 January 2007

Quantitative Fluorescence Microscopy and Image Deconvolution

scientific article published on 01 January 2003

Quantitative analysis of digital microscope images

scientific article

Quantitative fluorescence microscopy and image deconvolution

scientific article

REMBI: Recommended Metadata for Biological Images—enabling reuse of microscopy data in biology

scientific article published on 21 May 2021

RNA polymerase II transcription in living color

scientific article published in September 2007

Regulation of clathrin-coated vesicle formation.

scientific article

Role of neurogenic genes in establishment of follicle cell fate and oocyte polarity during oogenesis in Drosophila

scientific article

Scale integration: the structure and dynamics of macromolecular assemblies, cells and tissues ⬇️

scientific article published on February 16, 2012

Sds22 regulates aurora B activity and microtubule-kinetochore interactions at mitosis

scientific article

Software tools, data structures, and interfaces for microscope imaging.

scientific article

Standard metadata for 3D microscopy

scientific article published in 2022

Temporal profiling of the chromatin proteome reveals system-wide responses to replication inhibition

scientific article published on June 2008

The BioImage Archive – Building a Home for Life-Sciences Microscopy Data

scientific article published on 18 February 2022

The Image Data Resource: A Bioimage Data Integration and Publication Platform

scientific article

The Ndc80 complex targets Bod1 to human mitotic kinetochores

scientific article published in November 2017

The Ndc80 complex targets Bod1 to human mitotic kinetochores

The Nup107-160 nucleoporin complex promotes mitotic events via control of the localization state of the chromosome passenger complex

scientific article published on December 2009

The Open Microscopy Environment (OME) Data Model and XML file: open tools for informatics and quantitative analysis in biological imaging

scientific article

The Prolylhydroxylase PHD2 Modulates Centromere Function through the Hydroxylation of CENP-N

The SMC family: from chromosome condensation to dosage compensation.

scientific article

The adenomatous polyposis coli protein contributes to normal compaction of mitotic chromatin

scientific article

The making of the mitotic chromosome: modern insights into classical questions

scientific article

Three-dimensional multiple-wavelength fluorescence microscopy for the structural analysis of biological phenomena

scientific article

Time-lapse imaging reveals dynamic relocalization of PP1gamma throughout the mammalian cell cycle

scientific article

To 5D and beyond: quantitative fluorescence microscopy in the postgenomic era.

scientific article

Ubiquitin Receptor Protein UBASH3B Drives Aurora B Recruitment to Mitotic Microtubules

scientific article

Ubiquitylation-dependent localization of PLK1 in mitosis

scientific article

Web-based visualisation and analysis of 3D electron-microscopy data from EMDB and PDB.

scientific article

c-Src enhances the spreading of src-/- fibroblasts on fibronectin by a kinase-independent mechanism

scientific article

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