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List of works by Se-Ran Jun

Abiotic Stresses Shift Belowground Populus-Associated Bacteria Toward a Core Stress Microbiome

scientific article

Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions

scientific article

Assessment of genome annotation using gene function similarity within the gene neighborhood

scientific article

Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand.

scientific article published on 17 September 2018

Comparative genomics of hepatitis A virus, hepatitis C virus, and hepatitis E virus provides insights into the evolutionary history of Hepatovirus species

scientific article published on 19 November 2019

Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis

scientific article

Ebolavirus comparative genomics

scientific article (publication date: September 2015)

Genome-Based Comparison of Clostridioides difficile: Average Amino Acid Identity Analysis of Core Genomes

scientific article published on 14 February 2018

Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104.

scientific article

Global mapping of the protein structure space and application in structure-based inference of protein function.

scientific article

Insights from 20 years of bacterial genome sequencing

scientific article

Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment

scientific article

Multi-Omic Analysis Reveals Different Effects of Sulforaphane on the Microbiome and Metabolome in Old Compared to Young Mice

scientific article published on 29 September 2020

PanFP: pangenome-based functional profiles for microbial communities

scientific article published on 26 September 2015

Quality scores for 32,000 genomes

scientific article

Sample storage conditions induce post-collection biases in microbiome profiles

article

Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us?

scientific article published on 28 December 2017

Three Complete Genome Sequences of Genotype G Mumps Virus from the 2016 Outbreak in Arkansas, USA.

scientific article published on 10 August 2017

Viral Phylogenomics Using an Alignment-Free Method: A Three-Step Approach to Determine Optimal Length of k-mer

scientific article published on 19 January 2017

Whole-genome phylogeny of mammals: evolutionary information in genic and nongenic regions

scientific article

Whole-proteome phylogeny of large dsDNA virus families by an alignment-free method

scientific article published on 24 June 2009

Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution

scientific article

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