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List of works by Kate S. Baker

A framework for the study of zoonotic disease emergence and its drivers: spillover of bat pathogens as a case study

scientific article

Accessory Genome Dynamics and Structural Variation of <i>Shigella</i> from Persistent Infections

scientific article published on 27 April 2021

An outbreak of a rare Shiga-toxin-producing Escherichia coli serotype (O117:H7) among men who have sex with men.

scientific article

Animal infection studies of two recently discovered African bat paramyxoviruses, Achimota 1 and Achimota 2

scientific article published in Scientific Reports

Antibodies to henipavirus or henipa-like viruses in domestic pigs in Ghana, West Africa

scientific article

Bacillary dysentery from World War 1 and NCTC1, the first bacterial isolate in the National Collection

scientific article published on 7 November 2014

Bartonella species in bat flies (Diptera: Nycteribiidae) from western Africa

scientific article published on 6 February 2012

Bat trait, genetic and pathogen data from large-scale investigations of African fruit bats, Eidolon helvum

scientific article

Brucella abortus Strain 2308 Wisconsin Genome: Importance of the Definition of Reference Strains

scientific article

Brucella neotomae Infection in Humans, Costa Rica

scientific article published on June 2017

Characterization of pre-antibiotic era Klebsiella pneumoniae isolates with respect to antibiotic/disinfectant susceptibility and virulence in Galleria mellonella

scientific article published on 20 April 2015

Co-circulation of diverse paramyxoviruses in an urban African fruit bat population.

scientific article published on 28 December 2011

Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18

scientific article

Continent-wide panmixia of an African fruit bat facilitates transmission of potentially zoonotic viruses

scientific article published on January 2013

Draft Genome Sequence of 24570, the Type Strain of Shigella flexneri

scientific article published on 28 May 2015

Draft genome sequences of the type strains of Shigella flexneri held at Public Health England: comparison of classical phenotypic and novel molecular assays with whole genome sequence

scientific article

Draft genomes of Shigella strains used by the STOPENTERICS consortium

scientific article

Endemic Lagos bat virus infection in Eidolon helvum.

scientific article published on 28 February 2012

Genomic epidemiology of Shigella in the United Kingdom shows transmission of pathogen sublineages and determinants of antimicrobial resistance.

scientific article

Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei

scientific article published on 11 May 2021

Henipavirus neutralising antibodies in an isolated island population of African fruit bats

scientific article (publication date: 2012)

Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species

scientific article published on 13 April 2018

Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study

scientific article published on 27 April 2015

Looking Backward To Move Forward: the Utility of Sequencing Historical Bacterial Genomes

scientific article published on 26 July 2019

Maternal antibody and the maintenance of a lyssavirus in populations of seasonally breeding African bats.

scientific article

Metagenomic study of the viruses of African straw-coloured fruit bats: Detection of a chiropteran poxvirus and isolation of a novel adenovirus

scientific article

Novel, potentially zoonotic paramyxoviruses from the African straw-colored fruit bat Eidolon helvum

scientific article published on 14 November 2012

Poxviruses in bats … so what?

scientific article (publication date: 3 April 2014)

Species-wide whole genome sequencing reveals historical global spread and recent local persistence in Shigella flexneri

scientific article published on 4 August 2015

Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa

scientific article published on 21 December 2020

Support for viral persistence in bats from age-specific serology and models of maternal immunity.

scientific article published in March 2018

The extant World War 1 dysentery bacillus NCTC1: a genomic analysis

scientific article

Travel- and Community-Based Transmission of Multidrug-Resistant Shigella sonnei Lineage among International Orthodox Jewish Communities

scientific article

Use of cross-reactive serological assays for detecting novel pathogens in wildlife: assessing an appropriate cutoff for henipavirus assays in African bats

scientific article published on 5 July 2013

Viral antibody dynamics in a chiropteran host.

scientific article published on 13 November 2013

Whole genome sequencing of Shigella sonnei through PulseNet Latin America and Caribbean: advancing global surveillance of foodborne illnesses.

scientific article

Whole-genome sequencing revealed concurrent outbreaks of shigellosis in the English Orthodox Jewish Community caused by multiple importations of Shigella sonnei from Israel

scientific article published on 27 March 2018

Yersinia pestis pFra shows biovar-specific differences and recent common ancestry with a Salmonella enterica serovar Typhi plasmid

scientific article

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