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List of works by Xuerui Yang

A Simple Blocking PCR-Based Method for the Synthesis of High-Copy dsDNA Tandem Repeats

scientific article published on 01 October 2020

A Three Stage Integrative Pathway Search (TIPS) framework to identify toxicity relevant genes and pathways.

scientific article published on 14 June 2007

A dynamic analysis of IRS-PKR signaling in liver cells: a discrete modeling approach.

scientific article

An extensive microRNA-mediated network of RNA-RNA interactions regulates established oncogenic pathways in glioblastoma

scientific article

COPII mitigates ER stress by promoting formation of ER whorls

scientific article published on 28 September 2020

Cideb controls sterol-regulated ER export of SREBP/SCAP by promoting cargo loading at ER exit sites

scientific article published on 11 March 2019

CryoEM structure of yeast cytoplasmic exosome complex

scientific article

Cupid: simultaneous reconstruction of microRNA-target and ceRNA networks.

scientific article

De novo annotation and characterization of the translatome with ribosome profiling data

scientific article published on 10 March 2018

De novo reconstruction of cell interaction landscapes from single-cell spatial transcriptome data with DeepLinc

scientific article published on 03 June 2022

Double stranded RNA-dependent protein kinase promotes the tumorigenic phenotype in HepG2 hepatocellular carcinoma cells by activating STAT3.

scientific article published on 24 September 2014

Ependyma-expressed CCN1 restricts the size of the neural stem cell pool in the adult ventricular-subventricular zone

scientific article published on 03 February 2020

Function of HNRNPC in breast cancer cells by controlling the dsRNA-induced interferon response

scientific article published on 29 August 2018

Genome-wide assessment of differential translations with ribosome profiling data

scientific article

Germinal-center development of memory B cells driven by IL-9 from follicular helper T cells.

scientific article published on 26 June 2017

High-throughput validation of ceRNA regulatory networks

scientific article

Insights from multidimensional analyses of the pan-cancer DNA methylome heterogeneity and the uncanonical CpG-gene associations

scientific article published on 04 October 2018

Lateral transfer of mRNA and protein by migrasomes modifies the recipient cells

scientific article published on 29 September 2020

Mettl3-/Mettl14-mediated mRNA N6-methyladenosine modulates murine spermatogenesis.

scientific article published on 15 September 2017

Oncogenic Properties of NEAT1 in Prostate Cancer Cells Depend on the CDC5L-AGRN Transcriptional Regulation Circuit

scientific article published on 05 June 2018

Precision Medicine: What Challenges Are We Facing?

scientific article published on 12 October 2016

Reconstruct modular phenotype-specific gene networks by knowledge-driven matrix factorization

scientific article

Repression of PKR mediates palmitate-induced apoptosis in HepG2 cells through regulation of Bcl-2.

scientific article published on April 2009

RiboMiner: a toolset for mining multi-dimensional features of the translatome with ribosome profiling data

scientific article published on 01 August 2020

Ribosome Profiling Reveals Genome-wide Cellular Translational Regulation upon Heat Stress in Escherichia coli.

scientific article published on 11 October 2017

The Double-stranded RNA–dependent Protein Kinase Differentially Regulates Insulin Receptor Substrates 1 and 2 in HepG2 Cells ⬇️

scientific article published on August 4, 2010

The R-loop is a common chromatin feature of the Arabidopsis genome.

scientific article

The number of titrated microRNA species dictates ceRNA regulation.

scientific article published in May 2018

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