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List of works by Jan Ludwiczak

<i>localpdb—</i>a Python package to manage protein structures and their annotations

scientific article published in 2022

Combining Rosetta with molecular dynamics (MD): A benchmark of the MD-based ensemble protein design

scientific article published on 14 February 2018

Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS.

scientific article published on 12 August 2017

DeepCoil—a fast and accurate prediction of coiled-coil domains in protein sequences

scientific article published on 2 January 2019

Interactions between motor domains in kinesin-14 Ncd - a molecular dynamics study

scientific article published on 10 September 2019

Phosphorylation of thymidylate synthase affects slow-binding inhibition by 5-fluoro-dUMP and N(4)-hydroxy-dCMP.

scientific article

PiPred - a deep-learning method for prediction of π-helices in protein sequences

scientific article published on 03 May 2019

Variability of the core geometry in parallel coiled-coil bundles

scientific article published in October 2018

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