List of works - Yoko Satta

A human-specific allelic group of the MHC DRB1 gene in primates.

scientific article

A limit to the divergent allele advantage model supported by variable pathogen recognition across HLA-DRB1 allele lineages.

scientific article published on 22 September 2015

A new inference method for detecting an ongoing selective sweep

scientific article published on 30 September 2018

A pre-metazoan origin of the CRK gene family and co-opted signaling network

scientific article published on 30 September 2016

A retroposon analysis of Afrotherian phylogeny

scientific article

Acropora digitifera Encodes the Largest Known Family of Fluorescent Proteins that Has Persisted during the Evolution of Acropora Species

scientific article published on 05 December 2016

Alu-mediated inactivation of the human CMP- N-acetylneuraminic acid hydroxylase gene

scientific article

An ancestral haplotype of the human PERIOD2 gene associates with reduced sensitivity to light-induced melatonin suppression

scientific article

Ancestral population sizes and species divergence times in the primate lineage on the basis of intron and BAC end sequences

scientific article published on 01 October 2004

Characterisation of major histocompatibility complex class I genes in Japanese Ranidae frogs

scientific article published on 14 July 2016

Characterization of TRPA channels in the starfish Patiria pectinifera: involvement of thermally activated TRPA1 in thermotaxis in marine planktonic larvae

scientific article

Chemically synthesized pathogen-associated molecular patterns increase the expression of peptidoglycan recognition proteins via toll-like receptors, NOD1 and NOD2 in human oral epithelial cells.

scientific article

Coevolution of Siglec-11 and Siglec-16 via gene conversion in primates.

scientific article published on 23 November 2017

Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway.

scientific article

Comparative analysis of the S-intergenic region in class-II S haplotypes of self-incompatible Brassica rapa (syn. campestris)

scientific article published on 01 February 2006

Complex Haplotypes of GSTM1 Gene Deletions Harbor Signatures of a Selective Sweep in East Asian Populations

scientific article published on 30 August 2018

Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees.

scientific article published on 25 April 2018

Conserved Evolution of MHC Supertypes among Japanese Frogs Suggests Selection for Bd Resistance

scientific article published on 27 June 2023

Contribution of homoplasy and of ancestral polymorphism to the evolution of genes in anthropoid primates

scientific article published on 01 September 2002

Current perspectives on the intensity of natural selection of MHC loci.

scientific article published on 3 April 2013

Divergence, demography and gene loss along the human lineage.

scientific article

Do Genes Associated with Dyslexia of Chinese Characters Evolve Neutrally?

scientific article published on 17 June 2020

Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations

scientific article

Estimation of the highest chromosome number of eukaryotes based on the minimum interaction theory

scientific article published on 01 July 2002

Evidence for natural selection in the HAVCR1 gene: high degree of amino-acid variability in the mucin domain of human HAVCR1 protein.

scientific article published in August 2005

Evolution of the CYP2D gene cluster in humans and four non-human primates.

scientific article

Evolution of the mouse t haplotype: recent and worldwide introgression to Mus musculus ⬇️

scientific article published on August 1, 1992

Evolution of the primate lineage leading to modern humans: phylogenetic and demographic inferences from DNA sequences

scientific article (publication date: 29 April 1997)

Evolutionary History of the Risk of SNPs for Diffuse-Type Gastric Cancer in the Japanese Population

scientific article published on 10 July 2020

Evolutionary history and mechanism of the Drosophila cecropin gene family.

scientific article published in May 1998

Evolutionary history of the cancer immunity antigen MAGE gene family.

scientific article

Evolutionary origin of peptidoglycan recognition proteins in vertebrate innate immune system ⬇️

scientific article published on March 25, 2011

Evolutionary relationship of HLA-DRB genes inferred from intron sequences

scientific article published on 01 June 1996

Footprints of intragenic recombination at HLA loci

scientific article published on 01 May 1998

Frequent gene conversion events between the X and Y homologous chromosomal regions in primates.

scientific article

Frequent segmental sequence exchanges and rapid gene duplication characterize the MHC class I genes in lemurs

scientific article published on 03 October 2003

Functional Evolution of Avian RIG-I-Like Receptors

article

Gene flow between species of Lake Victoria haplochromine fishes.

scientific article published on 25 July 2007

HLA-DRB intron 1 sequences: implications for the evolution of HLA-DRB genes and haplotypes.

scientific article published in November 1996

How large was the founding population of Darwin's finches?

scientific article published in January 1997

How the ratio of nonsynonymous to synonymous pseudogene substitutions can be less than one

scientific article published on 01 January 1993

Improbable truth in human MHC diversity?

scientific article published on 01 March 1998

In vivo function and evolution of the eutherian-specific pluripotency marker UTF1.

scientific article

Integrative study on chromosome evolution of mammals, ants and wasps based on the minimum interaction theory.

scientific article published in June 2001

Intensity of natural selection at the major histocompatibility complex loci.

scientific article published on July 1994

Lineage-specific loss of function of bitter taste receptor genes in humans and nonhuman primates

scientific article

MHC class II DQB diversity in the Japanese black bear, Ursus thibetanus japonicus

scientific article (publication date: 29 November 2012)

Mhc-DRB genes evolution in lemurs.

scientific article published on 16 July 2002

Molecular clock and recombination in primate Mhc genes.

scientific article

Molecular evolution of the CYP2D subfamily in primates: purifying selection on substrate recognition sites without the frequent or long-tract gene conversion

scientific article published on 25 March 2015

Multiple episodic evolution events in V1R receptor genes of East-African cichlids

scientific article

Natural selection in the TLR-related genes in the course of primate evolution

article

No evidence for a second evolutionary stratum during the early evolution of mammalian sex chromosomes

scientific article (publication date: 2012)

Nonsynonymous substitution rate heterogeneity in the peptide-binding region among different HLA-DRB1 lineages in humans

scientific article published on 2 May 2014

Nucleotide sequence of a mouse Tcp-1 pseudogene: a nucleotide record for a t complex gene carried by an ancestor of the mouse.

scientific article published on January 1992

Origins of mouse inbred strains deduced from whole-genome scanning by polymorphic microsatellite loci

scientific article published on 01 January 2005

Paleo-demography of the Drosophila melanogaster subgroup: application of the maximum likelihood method.

scientific article published in August 1999

Patterns of evolution of MHC class II genes of crows (Corvus) suggest trans-species polymorphism.

scientific article

Phylogenetic analyses of Zostera species based on rbcL and matK nucleotide sequences: implications for the origin and diversification of seagrasses in Japanese waters.

scientific article published on October 2003

Physical contact and carbon transfer between a lichen-forming Trebouxia alga and a novel Alphaproteobacterium

scientific article

Polymorphism of the HLA class II loci in Siberian populations ⬇️

scientific article published on January 1, 1998

Positive selection on schizophrenia-associated ST8SIA2 gene in post-glacial Asia

scientific article published on 25 July 2018

Rapid Expansion of Phenylthiocarbamide Non-Tasters among Japanese Macaques.

scientific article published on 22 July 2015

Reconstructing the demographic history of the human lineage using whole-genome sequences from human and three great apes

scientific article (publication date: 2012)

Selective constraint acting on TLR2 and TLR4 genes of Japanese Rana frogs.

scientific article published on 25 May 2018

Sex-chromosomal differentiation and amelogenin genes in mammals

scientific article published on 01 August 2001

Some comments on calibration of molecular evolutionary rates

scientific article published on 01 January 1992

Structural basis for the specific recognition of the major antigenic peptide from the Japanese cedar pollen allergen Cry j 1 by HLA-DP5.

scientific article published on 11 July 2014

Substrate-dependent evolution of cytochrome P450: rapid turnover of the detoxification-type and conservation of the biosynthesis-type.

scientific article

The distribution of the ancestral haplotype in finite stepping-stone models with population expansion

scientific article published on 01 April 2004

The dominance of alleles controlling self-incompatibility in Brassica pollen is regulated at the RNA level.

scientific article published in February 2002

The evolutionary process of mammalian sex determination genes focusing on marsupial SRYs

scientific article published on 16 January 2018

The molecular descent of the major histocompatibility complex.

scientific article

The origin and evolution of fibromelanosis in domesticated chickens: Genomic comparison of Indonesian Cemani and Chinese Silkie breeds.

scientific article

The origin and evolution of human ampliconic gene families and ampliconic structure.

scientific article published on 21 December 2006

The origin and genetic variation of domestic chickens with special reference to junglefowls Gallus g. gallus and G. varius

scientific article (publication date: 19 May 2010)

Transcriptome analyses of immune tissues from three Japanese frogs (genus Rana ) reveals their utility in characterizing major histocompatibility complex class II.

scientific article published on 28 December 2017

List of works by Yoko Satta

A human-specific allelic group of the MHC DRB1 gene in primates.

A limit to the divergent allele advantage model supported by variable pathogen recognition across HLA-DRB1 allele lineages.

A new inference method for detecting an ongoing selective sweep

A pre-metazoan origin of the CRK gene family and co-opted signaling network

A retroposon analysis of Afrotherian phylogeny

Acropora digitifera Encodes the Largest Known Family of Fluorescent Proteins that Has Persisted during the Evolution of Acropora Species

Alu-mediated inactivation of the human CMP- N-acetylneuraminic acid hydroxylase gene

An ancestral haplotype of the human PERIOD2 gene associates with reduced sensitivity to light-induced melatonin suppression

Ancestral population sizes and species divergence times in the primate lineage on the basis of intron and BAC end sequences

Characterisation of major histocompatibility complex class I genes in Japanese Ranidae frogs

Characterization of TRPA channels in the starfish Patiria pectinifera: involvement of thermally activated TRPA1 in thermotaxis in marine planktonic larvae

Chemically synthesized pathogen-associated molecular patterns increase the expression of peptidoglycan recognition proteins via toll-like receptors, NOD1 and NOD2 in human oral epithelial cells.

Coevolution of Siglec-11 and Siglec-16 via gene conversion in primates.

Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway.

Comparative analysis of the S-intergenic region in class-II S haplotypes of self-incompatible Brassica rapa (syn. campestris)

Complex Haplotypes of GSTM1 Gene Deletions Harbor Signatures of a Selective Sweep in East Asian Populations

Complex evolution of the GSTM gene family involves sharing of GSTM1 deletion polymorphism in humans and chimpanzees.

Conserved Evolution of MHC Supertypes among Japanese Frogs Suggests Selection for Bd Resistance

Contribution of homoplasy and of ancestral polymorphism to the evolution of genes in anthropoid primates

Current perspectives on the intensity of natural selection of MHC loci.

Divergence, demography and gene loss along the human lineage.

Do Genes Associated with Dyslexia of Chinese Characters Evolve Neutrally?

Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations

Estimation of the highest chromosome number of eukaryotes based on the minimum interaction theory

Evidence for natural selection in the HAVCR1 gene: high degree of amino-acid variability in the mucin domain of human HAVCR1 protein.

Evolution of the CYP2D gene cluster in humans and four non-human primates.

Evolution of the mouse t haplotype: recent and worldwide introgression to Mus musculus ⬇️

Evolution of the primate lineage leading to modern humans: phylogenetic and demographic inferences from DNA sequences

Evolutionary History of the Risk of SNPs for Diffuse-Type Gastric Cancer in the Japanese Population

Evolutionary history and mechanism of the Drosophila cecropin gene family.

Evolutionary history of the cancer immunity antigen MAGE gene family.

Evolutionary origin of peptidoglycan recognition proteins in vertebrate innate immune system ⬇️

Evolutionary relationship of HLA-DRB genes inferred from intron sequences

Footprints of intragenic recombination at HLA loci

Frequent gene conversion events between the X and Y homologous chromosomal regions in primates.

Frequent segmental sequence exchanges and rapid gene duplication characterize the MHC class I genes in lemurs

Functional Evolution of Avian RIG-I-Like Receptors

Gene flow between species of Lake Victoria haplochromine fishes.

HLA-DRB intron 1 sequences: implications for the evolution of HLA-DRB genes and haplotypes.

How large was the founding population of Darwin's finches?

How the ratio of nonsynonymous to synonymous pseudogene substitutions can be less than one

Improbable truth in human MHC diversity?

In vivo function and evolution of the eutherian-specific pluripotency marker UTF1.

Integrative study on chromosome evolution of mammals, ants and wasps based on the minimum interaction theory.

Intensity of natural selection at the major histocompatibility complex loci.

Lineage-specific loss of function of bitter taste receptor genes in humans and nonhuman primates

MHC class II DQB diversity in the Japanese black bear, Ursus thibetanus japonicus

Mhc-DRB genes evolution in lemurs.

Molecular clock and recombination in primate Mhc genes.

Molecular evolution of the CYP2D subfamily in primates: purifying selection on substrate recognition sites without the frequent or long-tract gene conversion

Multiple episodic evolution events in V1R receptor genes of East-African cichlids

Natural selection in the TLR-related genes in the course of primate evolution

No evidence for a second evolutionary stratum during the early evolution of mammalian sex chromosomes

Nonsynonymous substitution rate heterogeneity in the peptide-binding region among different HLA-DRB1 lineages in humans

Nucleotide sequence of a mouse Tcp-1 pseudogene: a nucleotide record for a t complex gene carried by an ancestor of the mouse.

Origins of mouse inbred strains deduced from whole-genome scanning by polymorphic microsatellite loci

Paleo-demography of the Drosophila melanogaster subgroup: application of the maximum likelihood method.

Patterns of evolution of MHC class II genes of crows (Corvus) suggest trans-species polymorphism.

Phylogenetic analyses of Zostera species based on rbcL and matK nucleotide sequences: implications for the origin and diversification of seagrasses in Japanese waters.

Physical contact and carbon transfer between a lichen-forming Trebouxia alga and a novel Alphaproteobacterium

Polymorphism of the HLA class II loci in Siberian populations ⬇️

Positive selection on schizophrenia-associated ST8SIA2 gene in post-glacial Asia

Rapid Expansion of Phenylthiocarbamide Non-Tasters among Japanese Macaques.

Reconstructing the demographic history of the human lineage using whole-genome sequences from human and three great apes

Selective constraint acting on TLR2 and TLR4 genes of Japanese Rana frogs.

Sex-chromosomal differentiation and amelogenin genes in mammals

Some comments on calibration of molecular evolutionary rates

Structural basis for the specific recognition of the major antigenic peptide from the Japanese cedar pollen allergen Cry j 1 by HLA-DP5.

Substrate-dependent evolution of cytochrome P450: rapid turnover of the detoxification-type and conservation of the biosynthesis-type.

The distribution of the ancestral haplotype in finite stepping-stone models with population expansion

The dominance of alleles controlling self-incompatibility in Brassica pollen is regulated at the RNA level.

The evolutionary process of mammalian sex determination genes focusing on marsupial SRYs

The molecular descent of the major histocompatibility complex.

The origin and evolution of fibromelanosis in domesticated chickens: Genomic comparison of Indonesian Cemani and Chinese Silkie breeds.

The origin and evolution of human ampliconic gene families and ampliconic structure.

The origin and genetic variation of domestic chickens with special reference to junglefowls Gallus g. gallus and G. varius

Transcriptome analyses of immune tissues from three Japanese frogs (genus Rana ) reveals their utility in characterizing major histocompatibility complex class II.