List of works - Maho Yagi-Utsumi

A Self-Assembled Spherical Complex Displaying a Gangliosidic Glycan Cluster Capable of Interacting with Amyloidogenic Proteins.

scientific article published on 27 May 2015

A non-canonical UBA-UBL interaction forms the linear-ubiquitin-chain assembly complex

scientific article

A self-assembled, π-stacked complex as a finely-tunable magnetic aligner for biomolecular NMR applications.

scientific article

ATP hydrolysis by KaiC promotes its KaiA binding in the cyanobacterial circadian clock system

scientific article published on 03 June 2019

An anticancer drug suppresses the primary nucleation reaction that initiates the production of the toxic Aβ42 aggregates linked with Alzheimer's disease

scientific article published on 12 February 2016

Application of Site-Specific Spin Labeling for NMR Detecting Inhibitor-Induced Conformational Change of HIV-1 Reverse Transcriptase.

scientific article

Backbone (1)H, (13)C, and (15)N resonance assignments of the Fc fragment of human immunoglobulin G glycoprotein

scientific article

Backbone ¹H, ¹³C and ¹⁵N assignments of yeast Ump1, an intrinsically disordered protein that functions as a proteasome assembly chaperone

scientific article published on 25 September 2013

Characterization of amyloid β fibril formation under microgravity conditions

scientific article published on 12 June 2020

Close identity between alternatively folded state N2 of ubiquitin and the conformation of the protein bound to the ubiquitin-activating enzyme

scientific article

Conformational Dynamics of Wild-type Lys-48-linked Diubiquitin in Solution

scientific article

Crystal structure of UbcH5b~ubiquitin intermediate: insight into the formation of the self-assembled E2~Ub conjugates

scientific article

Crystal structure of human proteasome assembly chaperone PAC4 involved in proteasome formation.

scientific article published on 6 March 2017

Crystallographic snapshots of the EF-hand protein MCFD2 complexed with the intracellular lectin ERGIC-53 involved in glycoprotein transport

scientific article published on 29 April 2020

Effects of a Hydrophilic/Hydrophobic Interface on Amyloid-β Peptides Studied by Molecular Dynamics Simulations and NMR Experiments

scientific article published on 02 January 2019

Formation of the chaperonin complex studied by 2D NMR spectroscopy

scientific article published on 23 October 2017

Ganglioside-embedding small bicelles for probing membrane-landing processes of intrinsically disordered proteins.

scientific article published in February 2013

Improved secretion of glycoproteins using an N-glycan-restricted passport sequence tag recognized by cargo receptor

scientific article published on 13 March 2020

Integral approach to biomacromolecular structure by analytical-ultracentrifugation and small-angle scattering

scientific article published on 08 June 2020

Interactions Controlling the Slow Dynamic Conformational Motions of Ubiquitin

scientific article published on 28 August 2017

Mass Spectrometric Characterization of HIV-1 Reverse Transcriptase Interactions with Non-nucleoside Reverse Transcriptase Inhibitors.

scientific article

Membrane-Induced Dichotomous Conformation of Amyloid β with the Disordered N-Terminal Segment Followed by the Stable C-Terminal β Structure

scientific article published on 5 January 2016

Mode of substrate recognition by the Josephin domain of ataxin-3, which has an endo-type deubiquitinase activity

scientific article

Molecular and Structural Basis of the Proteasome α Subunit Assembly Mechanism Mediated by the Proteasome-Assembling Chaperone PAC3-PAC4 Heterodimer. ⬇️

scientific article published on 7 May 2019

NMR Characterization of Conformational Dynamics and Molecular Assemblies of Proteins

scientific article published on 01 January 2019

NMR Characterization of Conformational Interconversions of Lys48-Linked Ubiquitin Chains

scientific article published on 28 July 2020

NMR characterization of HIV-1 reverse transcriptase binding to various non-nucleoside reverse transcriptase inhibitors with different activities

scientific article

NMR characterization of the interaction of GroEL with amyloid β as a model ligand ⬇️

scientific article published on April 18, 2013

NMR characterization of the interactions between lyso-GM1 aqueous micelles and amyloid beta

scientific article

Newly developed Laboratory-based Size exclusion chromatography Small-angle x-ray scattering System (La-SSS)

scientific article published on 30 August 2019

Nuclear magnetic resonance approaches for characterizing interactions between the bacterial chaperonin GroEL and unstructured proteins.

scientific article published on 6 April 2013

Protein encapsulation within synthetic molecular hosts

scientific article published in Nature Communications

Redox-coupled structural changes of the catalytic a' domain of protein disulfide isomerase

scientific article

Redox-dependent domain rearrangement of protein disulfide isomerase coupled with exposure of its substrate-binding hydrophobic surface

scientific article

Reversed assembly of dyes in an RNA duplex compared with those in DNA.

scientific article published on 20 September 2012

Solution structure of the Q41N variant of ubiquitin as a model for the alternatively folded N2 state of ubiquitin

scientific article

Spectroscopic Characterization of Intermolecular Interaction of Amyloid β Promoted on GM1 Micelles.

scientific article

Stable isotope labeling approaches for NMR characterization of glycoproteins using eukaryotic expression systems.

scientific article published on 28 February 2018

Stable isotope-assisted NMR characterization of interaction between lipid A and sarcotoxin IA, a cecropin-type antibacterial peptide.

scientific article published on 10 January 2013

Structural and dynamic views of GM1 ganglioside.

scientific article published on May 2015

Structural and functional mosaic nature of MHC class I molecules in their peptide-free form.

scientific article published on 8 April 2013

Structural and molecular basis of carbohydrate-protein interaction systems as potential therapeutic targets

scientific article published on 01 January 2011

Structural basis for amyloidogenic peptide recognition by sorLA

scientific article published on 02 February 2015

Structural basis for proteasome formation controlled by an assembly chaperone nas2

scientific article

Structure-Free Validation of Residual Dipolar Coupling and Paramagnetic Relaxation Enhancement Measurements of Disordered Proteins

scientific article published on 11 November 2015

Supramolecular tholos-like architecture constituted by archaeal proteins without functional annotation

scientific article published on 30 January 2020

The immunostimulatory effects and chemical characteristics of heated honey

scientific article published on 13 September 2018

The use of spin desalting columns in DMSO-quenched H/D-exchange NMR experiments.

scientific article published on 11 February 2013

List of works by Maho Yagi-Utsumi

A Self-Assembled Spherical Complex Displaying a Gangliosidic Glycan Cluster Capable of Interacting with Amyloidogenic Proteins.

A non-canonical UBA-UBL interaction forms the linear-ubiquitin-chain assembly complex

A self-assembled, π-stacked complex as a finely-tunable magnetic aligner for biomolecular NMR applications.

ATP hydrolysis by KaiC promotes its KaiA binding in the cyanobacterial circadian clock system

An anticancer drug suppresses the primary nucleation reaction that initiates the production of the toxic Aβ42 aggregates linked with Alzheimer's disease

Application of Site-Specific Spin Labeling for NMR Detecting Inhibitor-Induced Conformational Change of HIV-1 Reverse Transcriptase.

Backbone (1)H, (13)C, and (15)N resonance assignments of the Fc fragment of human immunoglobulin G glycoprotein

Backbone ¹H, ¹³C and ¹⁵N assignments of yeast Ump1, an intrinsically disordered protein that functions as a proteasome assembly chaperone

Characterization of amyloid β fibril formation under microgravity conditions

Close identity between alternatively folded state N2 of ubiquitin and the conformation of the protein bound to the ubiquitin-activating enzyme

Conformational Dynamics of Wild-type Lys-48-linked Diubiquitin in Solution

Crystal structure of UbcH5b~ubiquitin intermediate: insight into the formation of the self-assembled E2~Ub conjugates

Crystal structure of human proteasome assembly chaperone PAC4 involved in proteasome formation.

Crystallographic snapshots of the EF-hand protein MCFD2 complexed with the intracellular lectin ERGIC-53 involved in glycoprotein transport

Effects of a Hydrophilic/Hydrophobic Interface on Amyloid-β Peptides Studied by Molecular Dynamics Simulations and NMR Experiments

Formation of the chaperonin complex studied by 2D NMR spectroscopy

Ganglioside-embedding small bicelles for probing membrane-landing processes of intrinsically disordered proteins.

Improved secretion of glycoproteins using an N-glycan-restricted passport sequence tag recognized by cargo receptor

Integral approach to biomacromolecular structure by analytical-ultracentrifugation and small-angle scattering

Interactions Controlling the Slow Dynamic Conformational Motions of Ubiquitin

Mass Spectrometric Characterization of HIV-1 Reverse Transcriptase Interactions with Non-nucleoside Reverse Transcriptase Inhibitors.

Membrane-Induced Dichotomous Conformation of Amyloid β with the Disordered N-Terminal Segment Followed by the Stable C-Terminal β Structure

Mode of substrate recognition by the Josephin domain of ataxin-3, which has an endo-type deubiquitinase activity

Molecular and Structural Basis of the Proteasome α Subunit Assembly Mechanism Mediated by the Proteasome-Assembling Chaperone PAC3-PAC4 Heterodimer. ⬇️

NMR Characterization of Conformational Dynamics and Molecular Assemblies of Proteins

NMR Characterization of Conformational Interconversions of Lys48-Linked Ubiquitin Chains

NMR characterization of HIV-1 reverse transcriptase binding to various non-nucleoside reverse transcriptase inhibitors with different activities

NMR characterization of the interaction of GroEL with amyloid β as a model ligand ⬇️

NMR characterization of the interactions between lyso-GM1 aqueous micelles and amyloid beta

Newly developed Laboratory-based Size exclusion chromatography Small-angle x-ray scattering System (La-SSS)

Nuclear magnetic resonance approaches for characterizing interactions between the bacterial chaperonin GroEL and unstructured proteins.

Protein encapsulation within synthetic molecular hosts

Redox-coupled structural changes of the catalytic a' domain of protein disulfide isomerase

Redox-dependent domain rearrangement of protein disulfide isomerase coupled with exposure of its substrate-binding hydrophobic surface

Reversed assembly of dyes in an RNA duplex compared with those in DNA.

Solution structure of the Q41N variant of ubiquitin as a model for the alternatively folded N2 state of ubiquitin

Spectroscopic Characterization of Intermolecular Interaction of Amyloid β Promoted on GM1 Micelles.

Stable isotope labeling approaches for NMR characterization of glycoproteins using eukaryotic expression systems.

Stable isotope-assisted NMR characterization of interaction between lipid A and sarcotoxin IA, a cecropin-type antibacterial peptide.

Structural and dynamic views of GM1 ganglioside.

Structural and functional mosaic nature of MHC class I molecules in their peptide-free form.

Structural and molecular basis of carbohydrate-protein interaction systems as potential therapeutic targets

Structural basis for amyloidogenic peptide recognition by sorLA

Structural basis for proteasome formation controlled by an assembly chaperone nas2

Structure-Free Validation of Residual Dipolar Coupling and Paramagnetic Relaxation Enhancement Measurements of Disordered Proteins

Supramolecular tholos-like architecture constituted by archaeal proteins without functional annotation

The immunostimulatory effects and chemical characteristics of heated honey

The use of spin desalting columns in DMSO-quenched H/D-exchange NMR experiments.