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List of works by Bart De Moor

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BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis

scientific article
Assessing computational tools for the discovery of transcription factor binding sites

scientific article
Gene prioritization through genomic data fusion

scientific article published in May 2006
Intrinsic gene expression profiles of gliomas are a better predictor of survival than histology.

scientific article published on 17 November 2009
A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.

scientific article
ENDEAVOUR update: a web resource for gene prioritization in multiple species

scientific article
Toucan: deciphering the cis-regulatory logic of coregulated genes.

scientific article
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms

scientific article
PKA and Sch9 control a molecular switch important for the proper adaptation to nutrient availability.

scientific article
TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis.

scientific article
A Multilinear Singular Value Decomposition

A guide to web tools to prioritize candidate genes

scientific article published on 21 March 2010
eXtasy: variant prioritization by genomic data fusion.

scientific article
Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks.

scientific article
Comparison and meta-analysis of microarray data: from the bench to the computer desk.

scientific article published in October 2003
Molecular karyotyping: array CGH quality criteria for constitutional genetic diagnosis

scientific article published on March 2005
Computational detection of cis -regulatory modules.

scientific article
Comparison of the PhoPQ regulon in Escherichia coli and Salmonella typhimurium

scientific article published in April 2005
arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays

scientific article
Biomarkers of endometriosis

scientific article published on 13 February 2013
Molecular response to cetuximab and efficacy of preoperative cetuximab-based chemoradiation in rectal cancer

scientific article
Inferring transcriptional modules from ChIP-chip, motif and microarray data

scientific article
Microarray screening for target genes of the proto-oncogene PLAG1.

scientific article published on January 2004
An unbiased evaluation of gene prioritization tools

article
Comprehensive analysis of the base composition around the transcription start site in Metazoa

scientific article
Systematic benchmarking of microarray data classification: assessing the role of non-linearity and dimensionality reduction

scientific article
Adaptive quality-based clustering of gene expression profiles.

scientific article published in May 2002
Biclustering microarray data by Gibbs sampling

scientific article
INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling

scientific article published in February 2002
LOGIC-insulin algorithm-guided versus nurse-directed blood glucose control during critical illness: the LOGIC-1 single-center, randomized, controlled clinical trial

scientific article published on 6 September 2012
TXTGate: profiling gene groups with text-based information

scientific article
DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli

scientific article
In silico identification and experimental validation of PmrAB targets in Salmonella typhimurium by regulatory motif detection

scientific article
A kernel-based integration of genome-wide data for clinical decision support

scientific article
Comparison of vocabularies, representations and ranking algorithms for gene prioritization by text mining.

scientific article published on August 2008
A tutorial on support vector machine-based methods for classification problems in chemometrics

scientific article published on 24 March 2010
Normal forms and entanglement measures for multipartite quantum states

scientific article (publication date: 15 July 2003)
Severe diarrhea in renal transplant patients: results of the DIDACT study

scientific article published on 01 June 2006
ModuleMiner - improved computational detection of cis-regulatory modules: are there different modes of gene regulation in embryonic development and adult tissues?

scientific article published on 07 April 2008
Gene profiling of hippocampal neuronal culture.

scientific article published in June 2003
Glycemic penalty index for adequately assessing and comparing different blood glucose control algorithms

scientific article published on 26 February 2008
INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis

scientific article
Characterization of the condensin component Cnap1 and protein kinase Melk as novel E2F target genes down-regulated by 1,25-dihydroxyvitamin D3.

scientific article
The value of tuberculin skin testing in haemodialysis patients.

scientific article published in February 2004
A seven-gene set associated with chronic hypoxia of prognostic importance in hepatocellular carcinoma

scientific article published on 30 June 2010
A genetic algorithm for the detection of new cis-regulatory modules in sets of coregulated genes

article
Mapping biomedical concepts onto the human genome by mining literature on chromosomal aberrations

scientific article published in April 2007
L2-norm multiple kernel learning and its application to biomedical data fusion.

scientific article
Why are some ectopic pregnancies characterized as pregnancies of unknown location at the initial transvaginal ultrasound examination?

scientific article
Prospective exploration of biochemical tissue composition via imaging mass spectrometry guided by principal component analysis.

scientific article

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