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List of works by Vitali Sintchenko

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Global population structure and evolution of Bordetella pertussis and their relationship with vaccination

scientific article published on 22 April 2014
Whole genome sequencing in clinical and public health microbiology

scientific article
Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing

scientific article published on 26 September 2018
Newly emerging clones of Bordetella pertussis carrying prn2 and ptxP3 alleles implicated in Australian pertussis epidemic in 2008-2010.

scientific article published on 13 March 2012
Rapid increase in pertactin-deficient Bordetella pertussis isolates, Australia.

scientific article published on April 2014
Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study

scientific article published on 27 April 2015
The global establishment of a highly-fluoroquinolone resistant Salmonella enterica serotype Kentucky ST198 strain

scientific article published on 18 December 2013
Handheld computer-based decision support reduces patient length of stay and antibiotic prescribing in critical care.

scientific article
Pertactin negative Bordetella pertussis demonstrates higher fitness under vaccine selection pressure in a mixed infection model.

scientific article published on 30 September 2015
Insight into Evolution of Bordetella pertussis from Comparative Genomic Analysis: Evidence of Vaccine-Driven Selection

scientific article published on 10 September 2010
Delineating community outbreaks of Salmonella enterica serovar Typhimurium by use of whole-genome sequencing: insights into genomic variability within an outbreak

scientific article
Comparative impact of guidelines, clinical data, and decision support on prescribing decisions: an interactive web experiment with simulated cases

scientific article
Impact of a web-based personally controlled health management system on influenza vaccination and health services utilization rates: a randomized controlled trial

scientific article
Mutations in rpoB gene and rifabutin susceptibility of multidrug-resistant Mycobacterium tuberculosis strains isolated in Australia.

scientific article
Selection and emergence of pertussis toxin promoter ptxP3 allele in the evolution of Bordetella pertussis.

scientific article published on 24 January 2012
Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities

scientific article
Whole Genome Sequencing Demonstrates Limited Transmission within Identified Mycobacterium tuberculosis Clusters in New South Wales, Australia

scientific article
Pathogen profiling for disease management and surveillance.

scientific article published on 8 May 2007
The role of pathogen genomics in assessing disease transmission

scientific article published on May 11, 2015
Treat or test first? Decision analysis of empirical antiviral treatment of influenza virus infection versus treatment based on rapid test results.

scientific article published in July 2002
Are we measuring the right end-points? Variables that affect the impact of computerised decision support on patient outcomes: a systematic review.

scientific article published on September 2007
Clinical microbiology informatics.

scientific article
Which clinical decisions benefit from automation? A task complexity approach.

scientific article published in July 2003
Bordetella pertussis clones identified by multilocus variable-number tandem-repeat analysis

scientific article
Improving resolution of public health surveillance for human Salmonella enterica serovar Typhimurium infection: 3 years of prospective multiple-locus variable-number tandem-repeat analysis (MLVA).

scientific article
Francisella tularensis subspecies holarctica, Tasmania, Australia, 2011

scientific article
Ureaplasma urealyticum is significantly associated with non-gonococcal urethritis in heterosexual Sydney men.

scientific article published on May 2010
Decision support systems for antibiotic prescribing.

scientific article published on December 2008
It Is Not All about Single Nucleotide Polymorphisms: Comparison of Mobile Genetic Elements and Deletions in Listeria monocytogenes Genomes Links Cases of Hospital-Acquired Listeriosis to the Environmental Source

scientific article
Genetic relationships of phage types and single nucleotide polymorphism typing of Salmonella enterica Serovar Typhimurium

scientific article published on 11 January 2012
Identification of non-tuberculous mycobacteria: utility of the GenoType Mycobacterium CM/AS assay compared with HPLC and 16S rRNA gene sequencing

scientific article published on 05 June 2009
Genomic dissection of Australian Bordetella pertussis isolates from the 2008-2012 epidemic.

scientific article published on 27 January 2016
The relationship between Bordetella pertussis genotype and clinical severity in Australian children with pertussis

scientific article published on 7 December 2015
Comparison of single- and multilocus sequence typing and toxin gene profiling for characterization of methicillin-resistant Staphylococcus aureus.

scientific article published on 22 August 2007
Added value of whole-genome sequencing for management of highly drug-resistant TB.

scientific article published on 9 December 2014
Identification of pathogenic Nocardia species by reverse line blot hybridization targeting the 16S rRNA and 16S-23S rRNA gene spacer regions.

scientific article published on 2 December 2009
secA1 gene sequence polymorphisms for species identification of Nocardia species and recognition of intraspecies genetic diversity.

scientific article published on September 2010
Identifying Likely Transmission Pathways within a 10-Year Community Outbreak of Tuberculosis by High-Depth Whole Genome Sequencing

scientific article
Genome-wide analysis of single nucleotide polymorphisms in Bordetella pertussis using comparative genomic sequencing

scientific article published on 26 August 2008
Identification of genetic markers of resistance to echinocandins, azoles and 5-fluorocytosine in Candida glabrata by next-generation sequencing: a feasibility study.

scientific article published on 23 March 2017
Defining the Core Genome of Salmonella enterica Serovar Typhimurium for Genomic Surveillance and Epidemiological Typing.

scientific article published on 27 May 2015
Assignment of reference 5'-end 16S rDNA sequences and species-specific sequence polymorphisms improves species identification of Nocardia.

scientific article published on 23 June 2009
dfrA thyA Double Deletion in para-Aminosalicylic Acid-Resistant Mycobacterium tuberculosis Beijing Strains

scientific article published on 28 March 2016
Better colonisation of newly emerged Bordetella pertussis in the co-infection mouse model study.

scientific article published on 23 June 2016
Characterisation of the Bordetella pertussis secretome under different media.

scientific article published on 24 February 2017
Francisella tularensis ssp. holarctica in Ringtail Possums, Australia

scientific article
Inaccurate ascertainment of morbidity and mortality due to influenza in administrative databases: a population-based record linkage study

scientific article published on 29 May 2014
Influenza outbreak during Sydney World Youth Day 2008: the utility of laboratory testing and case definitions on mass gathering outbreak containment

scientific article published on 3 September 2009
Improved identification of rapidly growing mycobacteria by a 16S-23S internal transcribed spacer region PCR and capillary gel electrophoresis.

scientific article
An emergent clade of SARS-CoV-2 linked to returned travellers from Iran

scientific article published in January 2020

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