List of works - Richard Reinhardt

Initial sequencing and analysis of the human genome

scientific article published on 15 February 2001

The genome sequence of Schizosaccharomyces pombe

scientific article

The genome of the kinetoplastid parasite, Leishmania major

scientific article

The primary transcriptome of the major human pathogen Helicobacter pylori

scientific article

The DNA sequence of the human X chromosome

scientific article published on 17 March 2005

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota.

scientific article

The DNA sequence of human chromosome 21

scientific article (publication date: 18 May 2000)

A physical map of the human genome

scientific article

Genome analysis of the platypus reveals unique signatures of evolution

scientific article

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

scientific article published in Science

The genome sequence of Atlantic cod reveals a unique immune system

scientific article published on 10 August 2011

Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

scientific article

Complete genome sequence of the marine planctomycete Pirellula sp. strain 1

scientific article

Nephrocystin-5, a ciliary IQ domain protein, is mutated in Senior-Loken syndrome and interacts with RPGR and calmodulin

scientific article

Mutations in the JARID1C gene, which is involved in transcriptional regulation and chromatin remodeling, cause X-linked mental retardation

scientific article

Mutations in a novel gene, NPHP3, cause adolescent nephronophthisis, tapeto-retinal degeneration and hepatic fibrosis

scientific article

An atlas of Hfq-bound transcripts reveals 3′ UTRs as a genomic reservoir of regulatory small RNAs

scientific article published on August 24, 2012

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

scientific article

Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail

scientific article published on 11 March 2010

Analysis of the host microRNA response to Salmonella uncovers the control of major cytokines by the let-7 family

scientific article

Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs

scientific article

Biochemical and proteomic analysis of the magnetosome membrane in Magnetospirillum gryphiswaldense

scientific article published on February 2004

Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter

scientific article published on December 2006

Helicobacter pylori genome evolution during human infection

scientific article

European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation

scientific article published on 23 December 2014

BISMA--fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences

scientific article

Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome

scientific article

Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

scientific article

DNAH5 mutations are a common cause of primary ciliary dyskinesia with outer dynein arm defects

scientific article

Recessive HYDIN mutations cause primary ciliary dyskinesia without randomization of left-right body asymmetry

scientific article

Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

scientific article (publication date: 3 December 2010)

High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

scientific article

The coiled-coil domain containing protein CCDC40 is essential for motile cilia function and left-right axis formation

scientific article

Deletions and point mutations of LRRC50 cause primary ciliary dyskinesia due to dynein arm defects

scientific article

Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes.

scientific article

A hypervariable 130-kilobase genomic region of Magnetospirillum gryphiswaldense comprises a magnetosome island which undergoes frequent rearrangements during stationary growth

scientific article

SNP and haplotype mapping for genetic analysis in the rat.

scientific article

Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo

scientific article

Parallel evolution of nacre building gene sets in molluscs

scientific article

CCDC103 mutations cause primary ciliary dyskinesia by disrupting assembly of ciliary dynein arms

scientific article

The mycosubtilin synthetase of Bacillus subtilis ATCC6633: a multifunctional hybrid between a peptide synthetase, an amino transferase, and a fatty acid synthase.

scientific article published on November 1999

Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group

scientific article

DNA methylation analysis of chromosome 21 gene promoters at single base pair and single allele resolution

scientific article

Comparative genome analysis of four magnetotactic bacteria reveals a complex set of group-specific genes implicated in magnetosome biomineralization and function

scientific article published on 20 April 2007

Characterization of a spontaneous nonmagnetic mutant of Magnetospirillum gryphiswaldense reveals a large deletion comprising a putative magnetosome island

scientific article

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

scientific article (publication date: 11 October 2016)

The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides.

scientific article published on 30 August 2013

Targeted methylation and gene silencing of VEGF-A in human cells by using a designed Dnmt3a-Dnmt3L single-chain fusion protein with increased DNA methylation activity

scientific article published on 4 December 2012

In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways

scientific article

Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase

scientific article published on 29 July 2009

List of works by Richard Reinhardt

Initial sequencing and analysis of the human genome

The genome sequence of Schizosaccharomyces pombe

The genome of the kinetoplastid parasite, Leishmania major

The primary transcriptome of the major human pathogen Helicobacter pylori

The DNA sequence of the human X chromosome

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota.

The DNA sequence of human chromosome 21

A physical map of the human genome

Genome analysis of the platypus reveals unique signatures of evolution

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

The genome sequence of Atlantic cod reveals a unique immune system

Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

Complete genome sequence of the marine planctomycete Pirellula sp. strain 1

Nephrocystin-5, a ciliary IQ domain protein, is mutated in Senior-Loken syndrome and interacts with RPGR and calmodulin

Mutations in the JARID1C gene, which is involved in transcriptional regulation and chromatin remodeling, cause X-linked mental retardation

Mutations in a novel gene, NPHP3, cause adolescent nephronophthisis, tapeto-retinal degeneration and hepatic fibrosis

An atlas of Hfq-bound transcripts reveals 3′ UTRs as a genomic reservoir of regulatory small RNAs

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail

Analysis of the host microRNA response to Salmonella uncovers the control of major cytokines by the let-7 family

Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs

Biochemical and proteomic analysis of the magnetosome membrane in Magnetospirillum gryphiswaldense

Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter

Helicobacter pylori genome evolution during human infection

European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation

BISMA--fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences

Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome

Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

DNAH5 mutations are a common cause of primary ciliary dyskinesia with outer dynein arm defects

Recessive HYDIN mutations cause primary ciliary dyskinesia without randomization of left-right body asymmetry

Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

The coiled-coil domain containing protein CCDC40 is essential for motile cilia function and left-right axis formation

Deletions and point mutations of LRRC50 cause primary ciliary dyskinesia due to dynein arm defects

Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes.

A hypervariable 130-kilobase genomic region of Magnetospirillum gryphiswaldense comprises a magnetosome island which undergoes frequent rearrangements during stationary growth

SNP and haplotype mapping for genetic analysis in the rat.

Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo

Parallel evolution of nacre building gene sets in molluscs

CCDC103 mutations cause primary ciliary dyskinesia by disrupting assembly of ciliary dynein arms

The mycosubtilin synthetase of Bacillus subtilis ATCC6633: a multifunctional hybrid between a peptide synthetase, an amino transferase, and a fatty acid synthase.

Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group

DNA methylation analysis of chromosome 21 gene promoters at single base pair and single allele resolution

Comparative genome analysis of four magnetotactic bacteria reveals a complex set of group-specific genes implicated in magnetosome biomineralization and function

Characterization of a spontaneous nonmagnetic mutant of Magnetospirillum gryphiswaldense reveals a large deletion comprising a putative magnetosome island

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides.

Targeted methylation and gene silencing of VEGF-A in human cells by using a designed Dnmt3a-Dnmt3L single-chain fusion protein with increased DNA methylation activity

In Vivo Cleavage Map Illuminates the Central Role of RNase E in Coding and Non-coding RNA Pathways

Generation and analysis of a 29,745 unique Expressed Sequence Tags from the Pacific oyster (Crassostrea gigas) assembled into a publicly accessible database: the GigasDatabase