List of works - Tao Zeng

A novel algorithm for finding optimal driver nodes to target control complex networks and its applications for drug targets identification

scientific article published on 19 January 2018

A novel network control model for identifying personalized driver genes in cancer

scientific article published on 25 November 2019

Analysis on gene modular network reveals morphogen-directed development robustness in Drosophila

scientific article published on 30 June 2020

Big-data-based edge biomarkers: study on dynamical drug sensitivity and resistance in individuals.

scientific article published on 26 September 2015

Cell-specific network constructed by single-cell RNA sequencing data.

scientific article published in June 2019

Chronic hepatitis B: dynamic change in Traditional Chinese Medicine syndrome by dynamic network biomarkers

scientific article published on 21 November 2019

Comparative network stratification analysis for identifying functional interpretable network biomarkers

scientific article

Deciphering early development of complex diseases by progressive module network.

scientific article published on 21 February 2014

Detecting disease genes of non-small lung cancer based on consistently differential interactions.

scientific article published on June 2015

Detecting tissue-specific early warning signals for complex diseases based on dynamical network biomarkers: study of type 2 diabetes by cross-tissue analysis.

scientific article published on 25 April 2013

Diagnosing phenotypes of single-sample individuals by edge biomarkers

scientific article published on 26 April 2015

Discovering personalized driver mutation profiles of single samples in cancer by network control strategy

scientific article published on 10 January 2018

Dynamic edge-based biomarker non-invasively predicts hepatocellular carcinoma with hepatitis B virus infection for individual patients based on blood testing

scientific article published on 01 August 2019

Dysfunction of PLA2G6 and CYP2C44-associated network signals imminent carcinogenesis from chronic inflammation to hepatocellular carcinoma

scientific article

Edge biomarkers for classification and prediction of phenotypes.

scientific article

Genomic and transcriptomic investigations of the evolutionary transition from oviparity to viviparity

scientific article published on 11 February 2019

Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms

scientific article published on 10 July 2020

High-Order Correlation Integration for Single-Cell or Bulk RNA-seq Data Analysis

scientific article published on 26 April 2019

Identifying Methylation Pattern and Genes Associated with Breast Cancer Subtypes ⬇️

scientific article published on 31 August 2019

Individual-specific edge-network analysis for disease prediction

scientific article published on 13 September 2017

Inferring Sequential Order of Somatic Mutations during Tumorgenesis based on Markov Chain Model.

scientific article published on September 2015

Integrative Analysis of Omics Big Data.

scientific article published in January 2018

Integrative enrichment analysis: a new computational method to detect dysregulated pathways in heterogeneous samples

scientific article published on 10 November 2015

Interferon-microRNA signalling drives liver precancerous lesion formation and hepatocarcinogenesis

scientific article published on 9 February 2016

Local network component analysis for quantifying transcription factor activities

scientific article published on 11 July 2017

Maximization of negative correlations in time-course gene expression data for enhancing understanding of molecular pathways

scientific article

Mixture classification model based on clinical markers for breast cancer prognosis.

scientific article published on 14 December 2009

Multi-view Subspace Clustering Analysis for Aggregating Multiple Heterogeneous Omics Data

scientific article published on 20 August 2019

Network biomarkers reveal dysfunctional gene regulations during disease progression

scientific article

Network control principles for identifying personalized driver genes in cancer

scientific article published on 10 November 2019

Pattern fusion analysis by adaptive alignment of multiple heterogeneous omics data

scientific article

Prediction of dynamical drug sensitivity and resistance by module network rewiring-analysis based on transcriptional profiling.

scientific article

Reconstructing dynamic gene regulatory networks from sample-based transcriptional data

scientific article

Revisit of Machine Learning Supported Biological and Biomedical Studies.

scientific article published in January 2018

Roles of TGFβ1 in the expression of phosphoinositide 3-kinase isoform genes and sensitivity and response of lung telocytes to PI3K inhibitors

scientific article published on 15 September 2019

Serum chemokine network correlates with chemotherapy in non-small cell lung cancer

scientific article published on 11 May 2015

Single-Cell RNA Sequencing-Based Computational Analysis to Describe Disease Heterogeneity

scientific article published on 12 July 2019

Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks.

scientific article published on January 2013

Unravelling miRNA regulation in yield of rice (Oryza sativa) based on differential network model.

scientific article published on 31 May 2018

Unravelling personalized dysfunctional gene network of complex diseases based on differential network model

scientific article published on 13 June 2015

[Expression and Clinical Significance of Late Endosomal/Lysosomal Adaptor,Mitogen-activated Protein Kinase and Mammalian Target of Rapamycin Activator 3 in Bladder Carcinoma]

scientific article published on 01 October 2019

List of works by Tao Zeng

A novel algorithm for finding optimal driver nodes to target control complex networks and its applications for drug targets identification

A novel network control model for identifying personalized driver genes in cancer

Analysis on gene modular network reveals morphogen-directed development robustness in Drosophila

Big-data-based edge biomarkers: study on dynamical drug sensitivity and resistance in individuals.

Cell-specific network constructed by single-cell RNA sequencing data.

Chronic hepatitis B: dynamic change in Traditional Chinese Medicine syndrome by dynamic network biomarkers

Comparative network stratification analysis for identifying functional interpretable network biomarkers

Deciphering early development of complex diseases by progressive module network.

Detecting disease genes of non-small lung cancer based on consistently differential interactions.

Detecting tissue-specific early warning signals for complex diseases based on dynamical network biomarkers: study of type 2 diabetes by cross-tissue analysis.

Diagnosing phenotypes of single-sample individuals by edge biomarkers

Discovering personalized driver mutation profiles of single samples in cancer by network control strategy

Dynamic edge-based biomarker non-invasively predicts hepatocellular carcinoma with hepatitis B virus infection for individual patients based on blood testing

Dysfunction of PLA2G6 and CYP2C44-associated network signals imminent carcinogenesis from chronic inflammation to hepatocellular carcinoma

Edge biomarkers for classification and prediction of phenotypes.

Genomic and transcriptomic investigations of the evolutionary transition from oviparity to viviparity

Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms

High-Order Correlation Integration for Single-Cell or Bulk RNA-seq Data Analysis

Identifying Methylation Pattern and Genes Associated with Breast Cancer Subtypes ⬇️

Individual-specific edge-network analysis for disease prediction

Inferring Sequential Order of Somatic Mutations during Tumorgenesis based on Markov Chain Model.

Integrative Analysis of Omics Big Data.

Integrative enrichment analysis: a new computational method to detect dysregulated pathways in heterogeneous samples

Interferon-microRNA signalling drives liver precancerous lesion formation and hepatocarcinogenesis

Local network component analysis for quantifying transcription factor activities

Maximization of negative correlations in time-course gene expression data for enhancing understanding of molecular pathways

Mixture classification model based on clinical markers for breast cancer prognosis.

Multi-view Subspace Clustering Analysis for Aggregating Multiple Heterogeneous Omics Data

Network biomarkers reveal dysfunctional gene regulations during disease progression

Network control principles for identifying personalized driver genes in cancer

Pattern fusion analysis by adaptive alignment of multiple heterogeneous omics data

Prediction of dynamical drug sensitivity and resistance by module network rewiring-analysis based on transcriptional profiling.

Reconstructing dynamic gene regulatory networks from sample-based transcriptional data

Revisit of Machine Learning Supported Biological and Biomedical Studies.

Roles of TGFβ1 in the expression of phosphoinositide 3-kinase isoform genes and sensitivity and response of lung telocytes to PI3K inhibitors

Serum chemokine network correlates with chemotherapy in non-small cell lung cancer

Single-Cell RNA Sequencing-Based Computational Analysis to Describe Disease Heterogeneity

Spatio-temporal analysis of type 2 diabetes mellitus based on differential expression networks.

Unravelling miRNA regulation in yield of rice (Oryza sativa) based on differential network model.

Unravelling personalized dysfunctional gene network of complex diseases based on differential network model

[Expression and Clinical Significance of Late Endosomal/Lysosomal Adaptor,Mitogen-activated Protein Kinase and Mammalian Target of Rapamycin Activator 3 in Bladder Carcinoma]