A New and Faster Method of Sorting by Transpositions

A new algorithm for aligning nested arc-annotated sequences under arbitrary weight schemes

A seismology-inspired approach to study change propagation

A study of some easily parallellizable automata

ADvISE: Architectural Decay in Software Evolution

scholarly article published March 2012

Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations

article

An Algorithmic View on Multi-Related-Segments: A Unifying Model for Approximate Common Interval

An Edit Distance Between RNA Stem-Loops

An Exploratory Study of Macro Co-changes

An efficient method for exploring the space of gene tree/species tree reconciliations in a probabilistic framework

scientific article

Cascade Decompositions are Bit-Vector Algorithms

scholarly article by Anne Bergeron & Sylvie Hamel published 2002 in Lecture Notes in Computer Science

Change Impact Analysis: An Earthquake Metaphor

scholarly article published June 2011

Comparing RNA Structures with Biologically Relevant Operations Cannot Be Done without Strong Combinatorial Restrictions

Computational identification of RNA functional determinants by three-dimensional quantitative structure-activity relationships

scientific article

Detecting asynchrony and dephase change patterns by mining software repositories

article published in 2013

Efficient identification of design patterns with bit-vector algorithm

Evaluating the impact of design pattern and anti-pattern dependencies on changes and faults

Fast Implementations of Automata Computations

From cascade decompositions to bit-vector algorithms

Heuristic, Branch-and-Bound Solver and Improved Space Reduction for the Median of Permutations Problem

article by Robin Milosz & Sylvie Hamel published 2018 in Lecture Notes in Computer Science

IDS: An Immune-Inspired Approach for the Detection of Software Design Smells

Identification of design motifs with pattern matching algorithms

Intersection of modules related to Macdonald's polynomials

Medians of Permutations: Building Constraints

Mining the relationship between anti-patterns dependencies and fault-proneness

Modeling RNA tertiary structure motifs by graph-grammars

scientific article published on 21 February 2007

On the Relationship between Program Evolution and Fault-Proneness: An Empirical Study

Rank aggregation with ties

Space of gene/species trees reconciliations and parsimonious models

scientific article published in October 2009

Using Kendall-τ Meta-Bagging to Improve Protein-Protein Docking Predictions

Using Medians to Generate Consensus Rankings for Biological Data

VECTOR ALGORITHMS FOR APPROXIMATE STRING MATCHING

scholarly article by ANNE BERGERON & Sylvie Hamel published February 2002 in International Journal of Foundations of Computer Science