List of works - Tim De Meyer

A Four-Gene Promoter Methylation Marker Panel Consisting of GREM1, NEURL, LAD1, and NEFH Predicts Survival of Clear Cell Renal Cell Cancer Patients

scientific article

A comprehensive overview of genomic imprinting in breast and its deregulation in cancer

scientific article published in Nature Communications

A genome-wide search for epigenetically [corrected] regulated genes in zebra finch using MethylCap-seq and RNA-seq

scientific article

A non-genetic, epigenetic-like mechanism of telomere length inheritance?

scientific article published on 23 October 2013

A variant at chromosome 9p21 is associated with recurrent myocardial infarction and cardiac death after acute coronary syndrome: the GRACE Genetics Study

scientific article

Addition of a novel, protective family history category allows better profiling of cardiovascular risk and atherosclerotic burden in the general population. The Asklepios Study

scientific article

Analysis of DNA methylation in cancer: location revisited

scientific article published on 01 July 2018

Arterial stiffness and influences of the metabolic syndrome: a cross-countries study

scientific article

Associations of rs4704397 in phosphodiesterase 8B with thyrotropin and thyroid hormone concentrations

scientific article published on 01 March 2013

Author Correction: Analysis of DNA methylation in cancer: location revisited

scientific article published on 01 July 2018

Below-Ground Attack by the Root Knot Nematode Meloidogyne graminicola Predisposes Rice to Blast Disease

scientific article published on 2 February 2017

Body mass index is negatively associated with telomere length: a collaborative cross-sectional meta-analysis of 87 observational studies

scientific article published in September 2018

Common genetic variation in the 3'-BCL11B gene desert is associated with carotid-femoral pulse wave velocity and excess cardiovascular disease risk: the AortaGen Consortium

scientific article published on 8 November 2011

Corrigendum: A genome-wide search for epigenetically regulated genes in zebra finch using MethylCap-seq and RNA-seq.

scientific article published on 17 March 2016

Decoy receptor 1 (DCR1) promoter hypermethylation and response to irinotecan in metastatic colorectal cancer ⬇️

scientific article published on 27 June 2017

Decreasing initial telomere length in humans intergenerationally understates age-associated telomere shortening

scientific article

Discovery of new methylation markers to improve screening for cervical intraepithelial neoplasia grade 2/3.

scientific article published on 9 March 2016

Dynamic epigenetic changes to VHL occur with sunitinib in metastatic clear cell renal cancer

scientific article published on 23 March 2016

Epigenetic sampling effects: nephrectomy modifies the clear cell renal cell cancer methylome.

scientific article

Evaluation of standard and advanced preprocessing methods for the univariate analysis of blood serum 1H-NMR spectra.

scientific article published on 17 August 2010

Exploratory analysis of the human breast DNA methylation profile upon soymilk exposure

scientific article published in Scientific Reports

Gender and telomere length: systematic review and meta-analysis

scientific article published on 21 December 2013

Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

scientific article

Genome-wide analyses identify a role for SLC17A4 and AADAT in thyroid hormone regulation

scientific article published in Nature Communications

Genome-wide methylome analysis using MethylCap-seq uncovers 4 hypermethylated markers with high sensitivity for both adeno- and squamous-cell cervical carcinoma

scientific article published on 12 October 2016

Identification and validation of WISP1 as an epigenetic regulator of metastasis in oral squamous cell carcinoma.

scientific article published on 22 September 2015

Identification of long non-coding RNAs involved in neuronal development and intellectual disability

scientific article published on 20 June 2016

Identification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease

scientific article

Is Southern blotting necessary to measure telomere length reproducibly? Authors' Response to: Commentary: The reliability of telomere length measurements

scientific article published on 24 September 2015

Letter by De Meyer Regarding Article, "Short Leukocyte Telomere Length Precedes Clinical Expression of Atherosclerosis: The Blood-and-Muscle Model"

scientific article published on 01 April 2018

Leukocyte telomere length and diet in the apparently healthy, middle-aged Asklepios population.

scientific article published on 25 April 2018

Locally advanced basal cell carcinoma has a distinct methylation and transcriptomic profile.

scientific article published on 14 December 2015

Low dose irradiation of thyroid cells reveals a unique transcriptomic and epigenetic signature in RET/PTC-positive cells.

scientific article

Lower red blood cell counts in middle-aged subjects with shorter peripheral blood leukocyte telomere length.

scientific article published on 28 July 2008

MEXPRESS: visualizing expression, DNA methylation and clinical TCGA data

scientific article

Methylome analysis of extreme chemoresponsive patients identifies novel markers of platinum sensitivity in high-grade serous ovarian cancer.

scientific article

Microbial Community Dynamics and Response to Plant Growth-Promoting Microorganisms in the Rhizosphere of Four Common Food Crops Cultivated in Hydroponics.

scientific article

Mining for viral fragments in methylation enriched sequencing data

scientific article

Molecular and epigenetic features of melanomas and tumor immune microenvironment linked to durable remission to ipilimumab-based immunotherapy in metastatic patients

scientific article published on 02 August 2016

Next-generation technologies and data analytical approaches for epigenomics

scientific article

No shorter telomeres in subjects with a family history of cardiovascular disease in the Asklepios study.

scientific article published on 18 October 2012

On cross-sectional associations of leukocyte telomere length with cardiac systolic, diastolic and vascular function: the Asklepios study

scientific article

PROTEOFORMER: deep proteome coverage through ribosome profiling and MS integration

scientific article

Paternal age at birth is an important determinant of offspring telomere length.

scientific article published on 19 September 2007

Possible technical and biological explanations for the 'parental telomere length inheritance discrepancy' enigma

scientific article

PubMeth: a cancer methylation database combining text-mining and expert annotation

scientific article

RAB25 expression is epigenetically downregulated in oral and oropharyngeal squamous cell carcinoma with lymph node metastasis

scientific article

Rapid genetic adaptation precedes the spread of an exotic plant species

scientific article

Reproducibility of Telomere Length Assessment--An International Collaborative Study

scientific article published on 24 September 2015

Reproducibility of telomere length assessment: Authors' Response to Damjan Krstajic and Ljubomir Buturovic

scientific article published on 24 September 2015

Reproducibility of telomere length assessment: an international collaborative study

scientific article published on 19 September 2014

Response to low-dose X-irradiation is p53-dependent in a papillary thyroid carcinoma model system ⬇️

scientific article published on August 29, 2011

SNP discovery using Paired-End RAD-tag sequencing on pooled genomic DNA of Sisymbrium austriacum (Brassicaceae).

scientific article published on 11 December 2012

SNP-guided identification of monoallelic DNA-methylation events from enrichment-based sequencing data.

scientific article

Screening of soy and milk protein hydrolysates for their ability to activate the CCK1 receptor.

scientific article

Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues

scientific article published on 11 January 2022

Studying telomeres in a longitudinal population based study.

scientific article published on January 2008

Systemic suppression of the shoot metabolism upon rice root nematode infection

scientific article

Systemic telomere length and preclinical atherosclerosis: the Asklepios Study.

scientific article published in December 2009

Targeted RNA-seq successfully identifies normal and pathogenic splicing events in breast/ovarian cancer susceptibility and Lynch syndrome genes

article

Telomere Length Integrates Psychological Factors in the Successful Aging Story, But What About the Biology? ⬇️

scientific article published on August 26, 2011

Telomere Length as Cardiovascular Aging Biomarker: JACC Review Topic of the Week

scientific article published on 01 August 2018

Telomere length and cardiovascular aging: The means to the ends? ⬇️

scientific article published on November 23, 2010

Telomeres and Atherosclerosis: The Attrition of an Attractive Hypothesis

scientific article published in May 2016

Telomeres and Atherosclerosis: The Intricate Pursuit of Mechanistic Insight Through Epidemiology

scientific article

The CpG island methylator phenotype: what's in a name?

scientific article

The effect of VEGF-targeted therapy on biomarker expression in sequential tissue from patients with metastatic clear cell renal cancer.

scientific article

The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments

scientific article published on 31 August 2021

The impact of extensive clonal growth on fine-scale mating patterns: a full paternity analysis of a lily-of-the-valley population (Convallaria majalis)

scientific article

Transcriptional analysis through RNA sequencing of giant cells induced by Meloidogyne graminicola in rice roots

scientific article

Transcriptional reprogramming by root knot and migratory nematode infection in rice

scientific article published on 17 September 2012

Transcriptome analysis of rice mature root tissue and root tips in early development by massive parallel sequencing.

scientific article

Transcript‐ and annotation‐guided genome assembly of the European starling

scientific article published in 2022

ViVar: a comprehensive platform for the analysis and visualization of structural genomic variation

scientific article

List of works by Tim De Meyer

A Four-Gene Promoter Methylation Marker Panel Consisting of GREM1, NEURL, LAD1, and NEFH Predicts Survival of Clear Cell Renal Cell Cancer Patients

A comprehensive overview of genomic imprinting in breast and its deregulation in cancer

A genome-wide search for epigenetically [corrected] regulated genes in zebra finch using MethylCap-seq and RNA-seq

A non-genetic, epigenetic-like mechanism of telomere length inheritance?

A variant at chromosome 9p21 is associated with recurrent myocardial infarction and cardiac death after acute coronary syndrome: the GRACE Genetics Study

Addition of a novel, protective family history category allows better profiling of cardiovascular risk and atherosclerotic burden in the general population. The Asklepios Study

Analysis of DNA methylation in cancer: location revisited

Arterial stiffness and influences of the metabolic syndrome: a cross-countries study

Associations of rs4704397 in phosphodiesterase 8B with thyrotropin and thyroid hormone concentrations

Author Correction: Analysis of DNA methylation in cancer: location revisited

Below-Ground Attack by the Root Knot Nematode Meloidogyne graminicola Predisposes Rice to Blast Disease

Body mass index is negatively associated with telomere length: a collaborative cross-sectional meta-analysis of 87 observational studies

Common genetic variation in the 3'-BCL11B gene desert is associated with carotid-femoral pulse wave velocity and excess cardiovascular disease risk: the AortaGen Consortium

Corrigendum: A genome-wide search for epigenetically regulated genes in zebra finch using MethylCap-seq and RNA-seq.

Decoy receptor 1 (DCR1) promoter hypermethylation and response to irinotecan in metastatic colorectal cancer ⬇️

Decreasing initial telomere length in humans intergenerationally understates age-associated telomere shortening

Discovery of new methylation markers to improve screening for cervical intraepithelial neoplasia grade 2/3.

Dynamic epigenetic changes to VHL occur with sunitinib in metastatic clear cell renal cancer

Epigenetic sampling effects: nephrectomy modifies the clear cell renal cell cancer methylome.

Evaluation of standard and advanced preprocessing methods for the univariate analysis of blood serum 1H-NMR spectra.

Exploratory analysis of the human breast DNA methylation profile upon soymilk exposure

Gender and telomere length: systematic review and meta-analysis

Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: an independent large-scale comparison

Genome-wide analyses identify a role for SLC17A4 and AADAT in thyroid hormone regulation

Genome-wide methylome analysis using MethylCap-seq uncovers 4 hypermethylated markers with high sensitivity for both adeno- and squamous-cell cervical carcinoma

Identification and validation of WISP1 as an epigenetic regulator of metastasis in oral squamous cell carcinoma.

Identification of long non-coding RNAs involved in neuronal development and intellectual disability

Identification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease

Is Southern blotting necessary to measure telomere length reproducibly? Authors' Response to: Commentary: The reliability of telomere length measurements

Letter by De Meyer Regarding Article, "Short Leukocyte Telomere Length Precedes Clinical Expression of Atherosclerosis: The Blood-and-Muscle Model"

Leukocyte telomere length and diet in the apparently healthy, middle-aged Asklepios population.

Locally advanced basal cell carcinoma has a distinct methylation and transcriptomic profile.

Low dose irradiation of thyroid cells reveals a unique transcriptomic and epigenetic signature in RET/PTC-positive cells.

Lower red blood cell counts in middle-aged subjects with shorter peripheral blood leukocyte telomere length.

MEXPRESS: visualizing expression, DNA methylation and clinical TCGA data

Methylome analysis of extreme chemoresponsive patients identifies novel markers of platinum sensitivity in high-grade serous ovarian cancer.

Microbial Community Dynamics and Response to Plant Growth-Promoting Microorganisms in the Rhizosphere of Four Common Food Crops Cultivated in Hydroponics.

Mining for viral fragments in methylation enriched sequencing data

Molecular and epigenetic features of melanomas and tumor immune microenvironment linked to durable remission to ipilimumab-based immunotherapy in metastatic patients

Next-generation technologies and data analytical approaches for epigenomics

No shorter telomeres in subjects with a family history of cardiovascular disease in the Asklepios study.

On cross-sectional associations of leukocyte telomere length with cardiac systolic, diastolic and vascular function: the Asklepios study

PROTEOFORMER: deep proteome coverage through ribosome profiling and MS integration

Paternal age at birth is an important determinant of offspring telomere length.

Possible technical and biological explanations for the 'parental telomere length inheritance discrepancy' enigma

PubMeth: a cancer methylation database combining text-mining and expert annotation

RAB25 expression is epigenetically downregulated in oral and oropharyngeal squamous cell carcinoma with lymph node metastasis

Rapid genetic adaptation precedes the spread of an exotic plant species

Reproducibility of Telomere Length Assessment--An International Collaborative Study

Reproducibility of telomere length assessment: Authors' Response to Damjan Krstajic and Ljubomir Buturovic

Reproducibility of telomere length assessment: an international collaborative study

Response to low-dose X-irradiation is p53-dependent in a papillary thyroid carcinoma model system ⬇️

SNP discovery using Paired-End RAD-tag sequencing on pooled genomic DNA of Sisymbrium austriacum (Brassicaceae).

SNP-guided identification of monoallelic DNA-methylation events from enrichment-based sequencing data.

Screening of soy and milk protein hydrolysates for their ability to activate the CCK1 receptor.

Spatiotemporal expression profile of novel and known small RNAs throughout rice plant development focussing on seed tissues

Studying telomeres in a longitudinal population based study.

Systemic suppression of the shoot metabolism upon rice root nematode infection

Systemic telomere length and preclinical atherosclerosis: the Asklepios Study.

Targeted RNA-seq successfully identifies normal and pathogenic splicing events in breast/ovarian cancer susceptibility and Lynch syndrome genes

Telomere Length Integrates Psychological Factors in the Successful Aging Story, But What About the Biology? ⬇️

Telomere Length as Cardiovascular Aging Biomarker: JACC Review Topic of the Week

Telomere length and cardiovascular aging: The means to the ends? ⬇️

Telomeres and Atherosclerosis: The Attrition of an Attractive Hypothesis

Telomeres and Atherosclerosis: The Intricate Pursuit of Mechanistic Insight Through Epidemiology

The CpG island methylator phenotype: what's in a name?

The effect of VEGF-targeted therapy on biomarker expression in sequential tissue from patients with metastatic clear cell renal cancer.

The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments

The impact of extensive clonal growth on fine-scale mating patterns: a full paternity analysis of a lily-of-the-valley population (Convallaria majalis)

Transcriptional analysis through RNA sequencing of giant cells induced by Meloidogyne graminicola in rice roots

Transcriptional reprogramming by root knot and migratory nematode infection in rice

Transcriptome analysis of rice mature root tissue and root tips in early development by massive parallel sequencing.

Transcript‐ and annotation‐guided genome assembly of the European starling

ViVar: a comprehensive platform for the analysis and visualization of structural genomic variation