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List of works by Siobhan M Brady

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Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.

scientific article published on 9 January 2018
DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor

scientific article
Clustering and Differential Alignment Algorithm: Identification of Early Stage Regulators in the Arabidopsis thaliana Iron Deficiency Response

scientific article published on 28 August 2015
When the time is ripe

scientific article published on June 25, 2013
Bioinformatic tools in Arabidopsis research

scientific article published on 01 January 2014
Integration of large-scale data for extraction of integrated Arabidopsis root cell-type specific models.

scientific article
The polyadenylation factor FIP1 is important for plant development and root responses to abiotic stresses

scientific article published on 26 June 2019
Draft Genome Sequence of Rhizobium rhizogenes Strain ATCC 15834

scientific article published on October 30, 2014
Indel Group in Genomes (IGG) Molecular Genetic Markers.

scientific article published on 19 July 2016
A network of transcriptional repressors modulates auxin responses

scientific article published on 18 November 2020
Innovation, conservation, and repurposing of gene function in root cell type development

scientific article
Detecting separate time scales in genetic expression data

scientific article (publication date: 16 June 2010)
Publisher Correction: A network of transcriptional repressors modulates auxin responses

scientific article published on 23 December 2020
A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis

scientific article published on 05 December 2019
Evolutionary flexibility in flooding response circuitry in angiosperms

scientific article published on 01 September 2019
Extreme breeding: Leveraging genomics for crop improvement

scientific article
Forming roots from shoot

scientific article published on 4 March 2022
A genome-scale TF-DNA interaction network of transcriptional regulation of Arabidopsis primary and specialized metabolism

scientific article published on 01 November 2021
Current status of the multinational Arabidopsis community

scientific article published on 01 July 2020
Quality control and evaluation of plant epigenomics data

scientific article published on 20 January 2022
Innovation, Conservation and Repurposing of Gene Function in Plant Root Cell Type Development

scientific article
Specification and regulation of vascular tissue identity in the Arabidopsis embryo

scientific article published on 20 March 2020
A bipartite transcription factor module controlling expression in the bundle sheath of Arabidopsis thaliana

scientific article published on 23 November 2020
A single cis-element that controls cell-type specific expression in Arabidopsis

Real-time whole-plant dynamics of heavy metal transport in Arabidopsis halleri and Arabidopsis thaliana by gamma-ray imaging

scientific article published on 23 April 2019
Quantitative Modeling of the Short-Term Response to Nitrogen Availability that Coordinates Early Events in Lateral Root Initiation

FRS7 and FRS12 recruit NINJA to regulate expression of glucosinolate biosynthesis genes

scientific article published on 08 April 2020
Molecular Mechanisms Driving Switch Behavior in Xylem Cell Differentiation

scientific article published on 01 July 2019
The soil microbiome modulates the sorghum root metabolome and cellular traits with a concomitant reduction of Striga infection

scientific article published in March 2024
De novo stem cell establishment in meristems requires repression of organ boundary cell fate

scientific article published in 2022
Anno genominis XX: 20 years of Arabidopsis genomics

scientific article
Translational regulation contributes to the elevated CO2 response in two Solanum species

scientific article published on 03 December 2019
Characterization of growth and development of sorghum genotypes with differential susceptibility to Striga hermonthica

scientific article published on 01 December 2021
Transcriptional networks: The next generation

scientific article
Epistatic Transcription Factor Networks Differentially Modulate Arabidopsis Growth and Defense

scientific article published on 18 December 2019
Nuclear transcriptomes at high resolution using retooled INTACT

Bioinformatic Tools in Arabidopsis Research

scientific article published on 01 January 2021
Auxin-Mediated Cell Cycle Activation during Early Lateral Root Initiation

scientific article published on 02 May 2019
Arabidopsis bioinformatics: tools and strategies

scientific article
iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community

scientific article published on 21 May 2019
Isolation of Nuclei in Tagged Cell Types (INTACT), RNA Extraction and Ribosomal RNA Degradation to Prepare Material for RNA-Seq

scholarly article by Mauricio Alberto Reynoso et al published 2018 in Bio-protocol
Innovation, conservation, and repurposing of gene function in root cell type development

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