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List of works by Chiranjib Chakraborty

A Domain-Specific Next-Generation Large Language Model (LLM) or ChatGPT is Required for Biomedical Engineering and Research

scientific article published in 2023

A Novel Multi-Epitopic Peptide Vaccine Candidate Against <i>Helicobacter pylori</i>: In-Silico Identification, Design, Cloning and Validation Through Molecular Dynamics

scientific article published on 20 January 2021

A SARS-CoV-2 vaccine candidate: In-silico cloning and validation

scientific article published on 15 July 2020

A hypothetical relationship between the nuclear reprogramming factors for induced pluripotent stem (iPS) cells generation--bioinformatic and algorithmic approach.

scientific article published on 30 December 2010

A novel zebrafish model to provide mechanistic insights into the inflammatory events in carrageenan-induced abdominal edema.

scientific article

ATP-dependent fructose uptake system in Deinococcus radiodurans

scientific article published on 07 August 2011

Advances in nanocarriers enabled brain targeted drug delivery across blood brain barrier

scientific article published on 02 February 2019

Analysing the Effect of Mutation on Protein Function and Discovering Potential Inhibitors of CDK4: Molecular Modelling and Dynamics Studies

scientific article

Anesthetic Molecule Interaction of Noble Gases with Proteins and Lipids and their Effect: A Review

scientific article published on 01 January 2018

Appearance and re-appearance of zoonotic disease during the pandemic period: long-term monitoring and analysis of zoonosis is crucial to confirm the animal origin of SARS-CoV-2 and monkeypox virus

scientific article published on 04 June 2022

Application of Bioactive Quercetin in Oncotherapy: From Nutrition to Nanomedicine

scientific article

Application of evolutionary based in silico methods to predict the impact of single amino acid substitutions in vitelliform macular dystrophy.

scientific article

Big nation, nano dream - the prospects of India's nanotech revolution

scientific article published on 02 April 2010

Bioactivity, Molecular Mechanism, and Targeted Delivery of Flavonoids for Bone Loss

scientific article published on 12 February 2023

Biochemical and molecular basis of insulin resistance

scientific article

Bioengineering of Novel Non-Replicating mRNA (NRM) and Self-Amplifying mRNA (SAM) Vaccine Candidates Against SARS-CoV-2 Using Immunoinformatics Approach

scientific article published on 04 January 2022

COVID-19: Consider IL6 receptor antagonist for the therapy of cytokine storm syndrome in SARS-CoV-2 infected patients

scientific article published on 28 May 2020

CRISPR-Cas9: A Preclinical and Clinical Perspective for the Treatment of Human Diseases

scientific article published on 20 September 2020

Can artificial intelligence-strengthened ChatGPT or other large language models transform nucleic acid research?

scientific article published in 2023

Can the chemotherapeutic agents perform anticancer activity through miRNA expression regulation? Proposing a new hypothesis [corrected].

scientific article published on 20 February 2015

Computational analysis of C-reactive protein for assessment of molecular dynamics and interaction properties.

scientific article

Computational and modeling approaches to understand the impact of the Fabry's disease causing mutation (D92Y) on the interaction with pharmacological chaperone 1-deoxygalactonojirimycin (DGJ)

scientific article published on 18 December 2018

Computational approaches and resources in single amino acid substitutions analysis toward clinical research

scientific article published on January 2014

Computational biophysical, biochemical, and evolutionary signature of human R-spondin family proteins, the member of canonical Wnt/β-catenin signaling pathway

scientific article

Computer aided novel antigenic epitopes selection from the outer membrane protein sequences of Aeromonas hydrophila and its analyses

scientific article published on 13 April 2020

Consider TLR5 for new therapeutic development against COVID-19

scientific article published on 11 May 2020

Crucial protein based drug targets and potential inhibitors for osteoporosis: new hope and possibilities

scientific article published on December 2013

Current landscape of long COVID clinical trials

scientific article published in May 2024

DNA barcoding to fishes: current status and future directions.

scientific article published on 9 June 2015

DNA pattern recognition using canonical correlation algorithm.

scientific article published on October 2015

Deciphering the impact of somatic mutations in exon 20 and exon 9 of PIK3CA gene in breast tumors among Indian women through molecular dynamics approach.

scientific article

Designing an effective therapeutic siRNA to silence RdRp gene of SARS-CoV-2

scientific article published on 02 June 2021

Development of epitope-based peptide vaccine against novel coronavirus 2019 (SARS-COV-2): Immunoinformatics approach

scientific article published on 28 February 2020

Does computational biology help us to understand the molecular phylogenetics and evolution of cluster of differentiation (CD) proteins?

scientific article published in February 2013

Drug Metabolizing Enzymes in Type II Diabetes and their Pharmacogenetics During Therapy of Anti-Diabetes Drugs.

scientific article

Dynamics of Diabetes and Obesity: An Alarming Situation in the Developing Countries in Asia.

scientific article published on 5 May 2016

Ebola eradication may need wider partnership

scientific article

Effect of Alumina Particles on the Osteogenic Ability of Osteoblasts

scientific article published on 28 July 2022

Effect of Wnt3a on keratinocytes utilizing in vitro and bioinformatics analysis

scientific article

Effects of propofol on proliferation and anti-apoptosis of neuroblastoma SH-SY5Y cell line: new insights into neuroprotection.

scientific article published on 25 February 2011

Erratum to: Can the chemotherapeutic agents perform anticancer activity through miRNA expression regulation? Proposing a new hypothesis

scientific article published on 01 November 2015

Evaluating protein-protein interaction (PPI) networks for diseases pathway, target discovery, and drug-design using 'in silico pharmacology'.

scientific article

Evaluation and Designing of Epitopic-Peptide Vaccine Against <i>Bunyamwera orthobunyavirus</i> Using M-Polyprotein Target Sequences

scientific article published on 29 November 2021

Evolution- and structure-based computational strategy reveals the impact of deleterious missense mutations on MODY 2 (maturity-onset diabetes of the young, type 2)

scientific article

Exploring the evolutionary relationship of insulin receptor substrate family using computational biology.

scientific article

Exploring the status of global terrestrial and aquatic microbial diversity through ‘Biodiversity Informatics’

scientific article published in 2022

Extensive Partnership, Collaboration, and Teamwork is Required to Stop the COVID-19 Outbreak

scientific article published on 30 May 2020

Fibroblast-Like-Synoviocytes Mediate Secretion of Pro-Inflammatory Cytokines via ERK and JNK MAPKs in Ti-Particle-Induced Osteolysis

scientific article published on 17 August 2020

Formulation and Application of Biodegradable Nanoparticles Based Biopharmaceutical Delivery - An Efficient Delivery System

scientific article published on 7 March 2016

From machine learning to deep learning: Advances of the recent data-driven paradigm shift in medicine and healthcare

scientific article published in January 2024

Future prospects of nanoparticles on brain targeted drug delivery.

scientific article

Identification and Design of a Next-Generation Multi Epitopes Bases Peptide Vaccine Candidate Against Prostate Cancer: An In Silico Approach

scientific article published on 28 April 2020

Immediate need for next-generation and mutation-proof vaccine to protect against current emerging Omicron sublineages and future SARS-CoV-2 variants: An urgent call for researchers and vaccine companies – Correspondence

scientific article published in 2022

Immunoinformatics approach to understand molecular interaction between multi-epitopic regions of SARS-CoV-2 spike-protein with TLR4/MD-2 complex

scientific article published on 08 October 2020

In silico analyses of COMT, an important signaling cascade of dopaminergic neurotransmission pathway, for drug development of Parkinson's disease.

scientific article published on 24 May 2012

India's Computational Biology Growth and Challenges

scientific article published on 28 July 2016

India's budget reduction and AIDS initiatives

scientific article published on 17 May 2015

India's stem cell research and development perspectives.

scientific article published on 14 March 2009

Influence of V54M mutation in giant muscle protein titin: a computational screening and molecular dynamics approach.

scientific article

Insight into Evolution and Conservation Patterns of B1-Subfamily Members of GPCR

scientific article published on 08 February 2020

Integrating in silico prediction methods, molecular docking, and molecular dynamics simulation to predict the impact of ALK missense mutations in structural perspective

scientific article

Interaction between miRNAs and signaling cascades of Wnt pathway in chronic lymphocytic leukemia

scientific article published on 26 February 2020

Intrathecal lemnalol, a natural marine compound obtained from Formosan soft coral, attenuates nociceptive responses and the activity of spinal glial cells in neuropathic rats

scientific article published on 01 December 2011

Landscape Mapping of Functional Proteins in Insulin Signal Transduction and Insulin Resistance: A Network-Based Protein-Protein Interaction Analysis ⬇️

scientific article published on January 31, 2011

Large language model to multimodal large language model: A journey to shape the biological macromolecules to biological sciences and medicine

scientific article published in September 2024

Mechanism of artemisinin resistance for malaria PfATP6 L263 mutations and discovering potential antimalarials: An integrated computational approach.

scientific article published on 29 July 2016

Methoxy poly(ethylene glycol)-poly(lactide) nanoparticles encapsulating quercetin act as an effective anticancer agent by inducing apoptosis in breast cancer

scientific article published on 4 September 2014

Micro-Environmental Signature of The Interactions between Druggable Target Protein, Dipeptidyl Peptidase-IV, and Anti-Diabetic Drugs

scientific article published on 21 December 2016

MicroRNAs mediated regulation of MAPK signaling pathways in chronic myeloid leukemia

scientific article

MicroRNAs: Possible Regulatory Molecular Switch Controlling the BBB Microenvironment

scientific article published on 29 January 2020

Nanoparticle based insulin delivery system: the next generation efficient therapy for Type 1 diabetes

scientific article

Nanoparticles as 'smart' pharmaceutical delivery.

scientific article published on June 2013

Need an AI-Enabled, Next-Generation, Advanced ChatGPT or Large Language Models (LLMs) for Error-Free and Accurate Medical Information

scientific article published in 2023

Neuroprotection by marine-derived compound, 11-dehydrosinulariolide, in an in vitro Parkinson's model: a promising candidate for the treatment of Parkinson's disease.

scientific article

Next generation delivery system for proteins and genes of therapeutic purpose: why and how?

scientific article

Novel biomarker for prostate cancer diagnosis by MRS.

scientific article published on June 2014

Omicron (B.1.1.529) variant of SARS-CoV-2 – Concerns, challenges and recent updates

scholarly article

Overexpression and purification of recombinant eel calcitonin and its phylogenetic analysis

scientific article published on 01 April 2005

Overexpression, purification and characterization of recombinant salmon calcitonin, a therapeutic protein, in Streptomyces avermitilis.

scientific article published in April 2004

PLK-1: Angel or devil for cell cycle progression.

scientific article published on 17 February 2016

Potentialities of induced pluripotent stem (iPS) cells for treatment of diseases.

scientific article

Potentiality of small interfering RNAs (siRNA) as recent therapeutic targets for gene-silencing.

scientific article published on March 2007

Predicting the impact of deleterious mutations in the protein kinase domain of FGFR2 in the context of function, structure, and pathogenesis--a bioinformatics approach.

scientific article

Prion disease: a deadly disease for protein misfolding.

scientific article

Probable Molecular Mechanism of Remdesivir for the Treatment of COVID-19: Need to Know More

scientific article published on 12 May 2020

Profiling cell-free and circulating miRNA: a clinical diagnostic tool for different cancers.

scientific article published on 29 January 2016

Profiling of phosphatidylinositol 3-kinase (PI3K) proteins in insulin signaling pathway.

scientific article published on 31 January 2015

RETRACTED: Recent trends of polymer mediated liposomal gene delivery system.

retracted scientific article published on 27 August 2014

RNA interference: potential therapeutic targets.

scientific article

Re: introduction to nanotechnology: potential applications in physical medicine and rehabilitation.

scientific article published in December 2007

Recent advances of fluorescent technologies for drug discovery and development.

scientific article published on January 2009

Regulatory functional territory of PLK-1 and their substrates beyond mitosis.

scientific article

Response to: Status of Remdesivir: Not Yet Beyond Question!

scientific article published on 15 September 2020

Reverse Zoonotic Transmission of SARS-CoV-2 and Monkeypox Virus: A Comprehensive Review

scientific article published in May 2024

Review of Prospects of Biological Fluid Biomarkers in Osteoarthritis.

scientific article

Rising Strengths Hong Kong SAR in Bioinformatics

scientific article published on 9 March 2016

SARS-CoV-2 Vaccines, Vaccine Development Technologies, and Significant Efforts in Vaccine Development during the Pandemic: The Lessons Learned Might Help to Fight against the Next Pandemic

scientific article published in 2023

SARS-CoV-2 and other human coronaviruses: Mapping of protease recognition sites, antigenic variation of spike protein and their grouping through molecular phylogenetics

scientific article published on 23 January 2021

Sirtuins family--recent development as a drug target for aging, metabolism, and age related diseases.

scientific article published on June 2013

Structural signature of the G719S-T790M double mutation in the EGFR kinase domain and its response to inhibitors.

scientific article published on 5 August 2014

Suppression of osteogenic activity by regulation of WNT and BMP signaling during titanium particle induced osteolysis.

scientific article

TNF/TNFR: drug target for autoimmune diseases and immune-mediated inflammatory diseases

scientific article published on June 2014

The Interplay among miRNAs, Major Cytokines, and Cancer-Related Inflammation

scientific article published on 11 April 2020

The Smart Programmable CRISPR Technology: A Next Generation Genome Editing Tool for Investigators.

scientific article published on 27 May 2016

The changing scenario of drug discovery using artificial intelligence (AI) to deep learning (DL): Recent advancement, success stories, collaborations, and challenges

scientific article published in August 2024

The crucial role and regulations of miRNAs in zebrafish development.

scientific article published on 28 January 2016

The molecular concept of atheromatous plaques

scientific article published on 2 May 2016

The novel strategies for next-generation cancer treatment: miRNA combined with chemotherapeutic agents for the treatment of cancer

scientific article published on 23 January 2018

The zebrafish model: use in studying cellular mechanisms for a spectrum of clinical disease entities.

scientific article published on May 2007

Therapeutic advances of miRNAs: A preclinical and clinical update

scientific article published on 29 August 2020

Therapeutic miRNA and siRNA: Moving from Bench to Clinic as Next Generation Medicine

scientific article published on 12 June 2017

Therapeutic microRNA Delivery Strategies with Special Emphasis on Cancer Therapy and Tumorigenesis: Current Trends and Future Challenges

scientific article published on 26 January 2016

Tocilizumab: A Therapeutic Option for the Treatment of Cytokine Storm Syndrome in COVID-19

scientific article published on 21 May 2020

Topology mapping of insulin-regulated glucose transporter GLUT4 using computational biology.

scientific article published on January 2013

Understanding the molecular dynamics of type-2 diabetes drug target DPP-4 and its interaction with Sitagliptin and inhibitor Diprotin-A.

scientific article

Understanding the molecular interaction of human argonaute-2 and miR-20a complex: A molecular dynamics approach

scientific article published on 18 July 2019

Unexpected sudden rise of human monkeypox cases in multiple non-endemic countries amid COVID-19 pandemic and salient counteracting strategies: Another potential global threat?

scientific article published on 11 June 2022

Virtual screening of the inhibitors targeting at the viral protein 40 of Ebola virus

scientific article published on 17 February 2016

Zebrafish: A complete animal model to enumerate the nanoparticle toxicity

scientific article

Zika: How safe is India?

scientific article published on 31 January 2017

miRNA-Regulated Key Components of Cytokine Signaling Pathways and Inflammation in Rheumatoid Arthritis

scientific article

miRNA-regulated cancer stem cells: understanding the property and the role of miRNA in carcinogenesis

scientific article published on 28 July 2016

miRNAs in Alzheimer Disease - A Therapeutic Perspective.

scientific article published on 28 August 2017

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