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List of works by Damien C Tully

A Study of the Coevolutionary Patterns Operating within the env Gene of the HIV-1 Group M Subtypes

article

A deeper view of transmitted/founder viruses using 454 whole genome deep sequencing

scientific article published on 13 September 2012

Capturing diverse microbial sequence with comprehensive and scalable probe design

scholarly article published 12 March 2018

Capturing sequence diversity in metagenomes with comprehensive and scalable probe design

scientific article published on 04 February 2019

Characteristics of HCV co-infection among HIV infected individuals from an area with high risk of blood-borne infections in central China.

scientific article

Chronology and evolution of the HIV-1 subtype C epidemic in Ethiopia

scientific article

Deep sequencing of hepatitis C virus reveals genetic compartmentalization in cerebrospinal fluid from cognitively impaired patients.

scientific article published on 5 April 2016

Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus

scientific article

Differentiation of exhausted CD8<sup>+</sup> T cells after termination of chronic antigen stimulation stops short of achieving functional T cell memory

scientific article published on 26 July 2021

Dynamics of envelope evolution in clade C SHIV-infected pig-tailed macaques during disease progression analyzed by ultra-deep pyrosequencing

scientific article

Early Transcriptional Divergence Marks Virus-Specific Primary Human CD8+ T Cells in Chronic versus Acute Infection

scientific article published in October 2017

Effect of scavenger receptor class B type I antagonist ITX5061 in patients with hepatitis C virus infection undergoing liver transplantation

scientific article published on 05 October 2015

Epigenetic scars of CD8<sup>+</sup> T cell exhaustion persist after cure of chronic infection in humans

scientific article published on 26 July 2021

Functional properties of the HIV-1 subtype C envelope glycoprotein associated with mother-to-child transmission

scientific article

HIVR4P 2016, Partnering for Prevention: Conference Summary and Highlights

scientific article

High resolution sequencing of hepatitis C virus reveals limited intra-hepatic compartmentalization in end-stage liver disease. ⬇️

scientific article

Interferon-I: The Pièce de Résistance of HIV-1 Transmission?

scientific article published on 9 March 2017

Low-abundance resistant mutations in HIV-1 subtype C antiretroviral therapy-naive individuals as revealed by pyrosequencing.

scientific article published on January 2013

Metagenomic sequencing of HIV-1 in the blood and female genital tract reveals little quasispecies diversity during acute infection

article

Molecular determinants of HIV-1 subtype C coreceptor transition from R5 to R5X4 ⬇️

scientific article published on August 24, 2010

Phylogenetic interpretation during outbreaks requires caution

scientific article published on 19 May 2020

Rare Control of SIVmac239 Infection in a Vaccinated Rhesus Macaque

scientific article published on 13 May 2017

Restricted genetic diversity of HIV-1 subtype C envelope glycoprotein from perinatally infected Zambian infants

scientific article

Rhesus Macaques Vaccinated with , , and Manifest Early Control of SIVmac239 Replication

scholarly article by Mauricio A Martins et al published 15 August 2018 in Journal of Virology

The epigenetic landscape of T cell exhaustion.

scientific article

Trace amounts of sporadically reappearing HCV RNA can cause infection

scientific article

Use of Dried Blood Spots to Elucidate Full-Length Transmitted/Founder HIV-1 Genomes

scientific article published on January 2016

Vaccine-Induced Simian Immunodeficiency Virus-Specific CD8+ T-Cell Responses Focused on a Single Nef Epitope Select for Escape Variants Shortly after Infection

scientific article

Vaccine-induced CD8+ T cells control AIDS virus replication

scientific article published on 30 September 2012

Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection

scientific article published on 8 March 2012

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