List of works - Oriol Fornés

Biologically relevant transfer learning improves transcription factor binding prediction

scientific article published on 27 September 2021

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

scientific article published on 23 August 2016

Evaluating the impact of single nucleotide variants on transcription factor binding.

scientific article published on 04 August 2016

Gene expression models based on transcription factor binding events confer insight into functional cis-regulatory variants

scientific article published on 01 August 2019

Human MiniPromoters for ocular-rAAV expression in ON bipolar, cone, corneal, endothelial, Müller glial, and PAX6 cells

scientific article published on 02 February 2021

InteractoMIX: a suite of computational tools to exploit interactomes in biological and clinical research.

scientific article

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

scientific article

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

scientific article

JASPAR 2020: update of the open-access database of transcription factor binding profiles

scientific article published on 01 January 2020

JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

scientific article published in 2021

JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles

scientific article published in 2023

MANTA2, update of the Mongo database for the analysis of transcription factor binding site alterations

scientific article published on 24 July 2018

ModLink+: improving fold recognition by using protein-protein interactions

scientific article published on 08 April 2009

Networks of ProteinProtein Interactions: From Uncertainty to Molecular Details.

scientific article

On the use of knowledge-based potentials for the evaluation of models of protein-protein, protein-DNA, and protein-RNA interactions.

scientific article published on January 2014

c-Myc is a novel Leishmania virulence factor by proxy that targets the host miRNA system and is essential for survival in human macrophages

scientific article published on 22 June 2018

List of works by Oriol Fornés

Biologically relevant transfer learning improves transcription factor binding prediction

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

Evaluating the impact of single nucleotide variants on transcription factor binding.

Gene expression models based on transcription factor binding events confer insight into functional cis-regulatory variants

Human MiniPromoters for ocular-rAAV expression in ON bipolar, cone, corneal, endothelial, Müller glial, and PAX6 cells

InteractoMIX: a suite of computational tools to exploit interactomes in biological and clinical research.

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

JASPAR 2020: update of the open-access database of transcription factor binding profiles

JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles

JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles

MANTA2, update of the Mongo database for the analysis of transcription factor binding site alterations

ModLink+: improving fold recognition by using protein-protein interactions

Networks of ProteinProtein Interactions: From Uncertainty to Molecular Details.

On the use of knowledge-based potentials for the evaluation of models of protein-protein, protein-DNA, and protein-RNA interactions.

c-Myc is a novel Leishmania virulence factor by proxy that targets the host miRNA system and is essential for survival in human macrophages