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List of works by Simone Zaccaria

Accurate quantification of copy-number aberrations and whole-genome duplications in multi-sample tumor sequencing data

scientific article published on 02 September 2020

Characterizing allele- and haplotype-specific copy numbers in single cells with CHISEL

scientific article published on 02 September 2020

Complexity and algorithms for copy-number evolution problems

scientific article

Copy-Number Evolution Problems: Complexity and Algorithms

HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads.

scientific article published on 3 July 2018

HapCol: accurate and memory-efficient haplotype assembly from long reads

scientific article

Identifying tumor clones in sparse single-cell mutation data

scientific article published on 01 July 2020

On the Minimum Error Correction Problem for Haplotype Assembly in Diploid and Polyploid Genomes.

scientific article

On the inversion-indel distance

scientific article

Phylogenetic Copy-Number Factorization of Multiple Tumor Samples.

scientific article published on 16 April 2018

SCARLET: Single-cell tumor phylogeny inference with copy-number constrained mutation losses

scientific article published on 01 April 2020

The Copy-Number Tree Mixture Deconvolution Problem and Applications to Multi-sample Bulk Sequencing Tumor Data

scientific article

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