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List of works by Ian T. Foster

14 examples of how LLMs can transform materials science and chemistry: a reflection on a large language model hackathon

scientific article published in January 2023

2020 computing: a two-way street to science's future.

scientific article published on March 2006

<i>BraggNN</i>: fast X-ray Bragg peak analysis using deep learning

scientific article published on 10 December 2021

A Comparison of Using Taverna and BPEL in Building Scientific Workflows: the case of caGrid

scientific article

A Distributed Look-up Architecture for Text Mining Applications using MapReduce

scholarly article published November 2011

A Hybrid Human-Computer Approach to the Extraction of Scientific Facts from the Literature

scientific article

A Java commodity grid kit

A Java commodity grid kit

A Scalable Cluster Algorithm for Internet Resources

A case study for cloud based high throughput analysis of NGS data using the globus genomics system

scientific article

A compiler approach to scalable concurrent-program design

scientific article published in 1994

A computational framework for telemedicine

A data ecosystem to support machine learning in materials science

scientific article published in 2019

A declarative state transition system

A differentiated services implementation for high-performance TCP flows

A distributed look-up architecture for text mining applications using MapReduce

article published in 2011

A high-performance parallel theorem prover

A high-throughput x-ray microtomography system at the Advanced Photon Source

article

A materials data framework and dataset for elastomeric foam impact mitigating materials

scientific article published in 2023

A notation and system for expressing and executing cleanly typed workflows on messy scientific data

article published in 2005

A regional nuclear conflict would compromise global food security

scientific article published on 16 March 2020

A roadmap for caGrid, an enterprise Grid architecture for biomedical research.

scientific article published on January 2008

A sequential implementation of Parlog

A spatial modeling framework to evaluate domestic biofuel-induced potential land use changes and emissions

scientific article published on 6 February 2014

Accelerating medical research using the swift workflow system

scientific article (publication date: 2007)

Addressing data access needs of the long-tail distribution of geoscientists

article published in 2012

Aligning Multiple RNA Sequences

An End-to-End Programming Model for AI Engine Architectures

scientific article published on 17 June 2024

An adaptive strategy for scheduling data-intensive applications in Grid environments

Applying the Virtual Data Provenance Model

Atlas of Transcription Factor Binding Sites from ENCODE DNase Hypersensitivity Data Across 27 Tissue Types

Atlas of Transcription Factor Binding Sites from ENCODE DNase Hypersensitivity Data across 27 Tissue Types

scientific article published on 01 August 2020

BDQC: a general-purpose analytics tool for domain-blind validation of Big Data

Big biomedical data as the key resource for discovery science

scientific article published on 21 July 2015

BioWorkbench: a high-performance framework for managing and analyzing bioinformatics experiments

scientific article published on 29 August 2018

Brief history of agricultural systems modeling

scientific article

Build Grid Enabled Scientific Workflows Using gRAVI and Taverna

Building Scientific Workflow with Taverna and BPEL: A Comparative Study in caGrid

CIM-EARTH: Framework and Case Study

CaGrid Workflow Toolkit: a Taverna based workflow tool for cancer grid ⬇️

scientific article (publication date: 2 November 2010)

Characterizing agricultural impacts of recent large-scale US droughts and changing technology and management

scientific article published in 2018

Cloud Computing and Grid Computing 360-Degree Compared

article

CoG kits

Combining batch execution and leasing using virtual machines

Combining the Power of Taverna and caGrid: Scientific Workflows that Enable Web-Scale Collaboration

scientific article (publication date: November 2008)

Communicating Security Assertions over the GridFTP Control Channel

Compositional parallel programming languages

article

Computational Grids

Computational grids: On-demand computing in science and engineering

Computing outside the box

Condor-G: A Computation Management Agent for Multi-Institutional Grids

Consensus Genotyper for Exome Sequencing (CGES): improving the quality of exome variant genotypes

scientific article

Constraints and potentials of future irrigation water availability on agricultural production under climate change

scientific article (publication date: 4 March 2014)

Data Grid tools: enabling science on big distributed data

Data publication with the structural biology data grid supports live analysis

scientific article

Data station

scientific article published in 2022

Data-intensive CyberShake computations on an opportunistic cyberinfrastructure

Describing the elephant

article by Ian Foster & Steven Tuecke published 1 July 2005 in ACM Queue

Design and analysis of data management in scalable parallel scripting

Die Anatomie des Grid

Editors’ Message

Efficient Incremental Maintenance of Derived Relations and BLAST Computations in Bioinformatics Data Warehouses

Efficient Processing of Relational Queries with Sum Constraints

Efficient and Secure Transfer, Synchronization, and Sharing of Big Data

article published in 2014

Efficient computation control in concurrent logic languages

Emerging Computational Methods for the Life Sciences Workshop 2012

scientific article (publication date: 15 August 2013)

Enabling Remote Management of FaaS Endpoints with Globus Compute Multi-User Endpoints

scientific article published on 18 July 2024

Enabling collaborative research using the Biomedical Informatics Research Network (BIRN)

scientific article (publication date: 2011)

Evaluating the utility of dynamical downscaling in agricultural impacts projections.

scientific article

Exascale applications: skin in the game

scientific article published on 20 January 2020

Experiences in Running Workloads over Grid3

Explicit Management of Memory Hierarchy

article

Exposing UDDI Service Descriptions and Their Metadata Annotations as WS-Resources

FAIR for AI: An interdisciplinary and international community building perspective

scientific article published on 26 July 2023

FAIR principles for AI models with a practical application for accelerated high energy diffraction microscopy

scientific article published in 2022

FTK: A Simplicial Spacetime Meshing Framework for Robust and Scalable Feature Tracking

scientific article published in 2021

Fine-grained accelerator partitioning for Machine Learning and Scientific Computing in Function as a Service Platform

scientific article published on 10 November 2023

Flat Parlog: A basis for comparison

Foreword

Foreword

GNARE: automated system for high-throughput genome analysis with grid computational backend

scientific article published on October 2005

GRUBER: A Grid Resource Usage SLA Broker

Globus Nexus: A Platform-as-a-Service Provider of Research Identity, Profile, and Group Management. ⬇️

scientific article

Globus Online: Accelerating and Democratizing Science through Cloud-Based Services

article by Ian Foster published May 2011 in IEEE Internet Computing

Globus Platform-as-a-Service for Collaborative Science Applications

scientific article

Globus Timers: Scheduling Periodic Data Management Actions on Distributed Research Infrastructure

scientific article published on 10 September 2023

Globus Toolkit Version 4: Software for Service-Oriented Systems

scholarly article by Ian Foster published July 2006 in Journal of Computer Science and Technology

Globus Toolkit Version 4: Software for Service-Oriented Systems

scholarly article by Ian Foster published 2005 in Lecture Notes in Computer Science

Globus: a Metacomputing Infrastructure Toolkit

Grid Service Level Agreements

Grid technologies empowering drug discovery

scientific article

GridCopy: Moving Data Fast on the Grid

article

Grids

High-Performance Computational Grids

High-performance distributed computing: The I-WAY experiment and beyond

How Do I Model State? Let Me Count the Ways

How do I model state?

I'll take that to go: Big data bags and minimal identifiers for exchange of large, complex datasets

Identifying Dynamic Replication Strategies for a High-Performance Data Grid

Improving I/O Performance for Exascale Applications Through Online Data Layout Reorganization

scientific article published in 2022

Interoperability of GADU in using heterogeneous grid resources for bioinformatics applications

scientific article

Jetstream

Job and data clustering for aggregate use of multiple production cyberinfrastructures

article

Language constructs and runtime systems for compositional parallel programming

article

Languages for Parallel Processing

Linking scientific instruments and computation: Patterns, technologies, and experiences

scientific article published in 2022

Linking the Dynamic PicoProbe Analytical Electron-Optical Beam Line / Microscope to Supercomputers

scientific article published on 10 November 2023

Managed GridFTP

Mapping the Gnutella Network: Macroscopic Properties of Large-Scale Peer-to-Peer Systems

Matminer: An open source toolkit for materials data mining

Message from the chairpersons

Multiparadigm communications in Java for grid computing

NCI Workshop Report: Clinical and Computational Requirements for Correlating Imaging Phenotypes with Genomics Signatures

scientific article

NEESgrid: Lessons Learned for Future Cyberinfrastructure Development

article

NONUS: A No-Onus Platform for Generating Grant Reports

NeXeme: A distributed scheme based on Nexus

Open-source software sustainability models: initial white paper from the informatics technology for cancer research sustainability and industry partnership working group

journal article published in 2021

Orchestrating caGrid Services in Taverna

article published in 2008

Parallel computing in 2010

Parallel computing in climate and weather modeling

Parallelizing the execution of sequential scripts

Parsl

Petrel

Playing catch-up in building an open research commons

scientific article published on 15 July 2022

Predicting application run times using historical information

Predictive Big Data Analytics: A Study of Parkinson's Disease Using Large, Complex, Heterogeneous, Incongruent, Multi-Source and Incomplete Observations

scientific article

Prevalence of Inherited Mutations in Breast Cancer Predisposition Genes among Women in Uganda and Cameroon

scientific article published on 23 December 2019

Protein Generation via Genome-scale Language Models with Bio-physical Scoring

scientific article published on 10 November 2023

Providing Map and GPS Assistance to Service Composition in Bioinformatics

article

RAPIDS: Reconciling Availability, Accuracy, and Performance in Managing Geo-Distributed Scientific Data

scientific article published on 07 August 2023

Report on the International Provenance and Annotation Workshop

article published in 2006

Reproducible big data science: A case study in continuous FAIRness

scholarly article published 27 February 2018

Reproducible big data science: A case study in continuous FAIRness

scientific article published on 11 April 2019

Resource management for ultra-scale computational grid applications

Scaling System-Level Science: Scientific Exploration and IT Implications

article published in 2006

ScholarBERT: Bigger is Not Always Better

Science as a Service [Guest editors' introduction]

scientific article published on 24 August 2016

Scientific Workflow Systems for 21st Century, New Bottle or New Wine?

scholarly article published July 2008

Scientific Workflows as Services in caGrid: A Taverna and gRAVI Approach

Security and Certification Issues in Grid Computing

Service-Oriented Science: Scaling eScience Impact

Service-oriented science

scientific article

ServiceMap: Providing Map and GPS Assistance to Service Composition in Bioinformatics

article

Services for Science

Special Issue: The First Provenance Challenge

article

Strategies for accelerating the adoption of materials informatics

Supplemental expert report of Prof. Ian Foster ⬇️

analysis for Hachette v. Internet Archive

Swift: A language for distributed parallel scripting

article published in 2011

Swift: Fast, Reliable, Loosely Coupled Parallel Computation

Task parallelism and high-performance languages

TeraGrid's integrated information service

The Anatomy of the Grid

The Anatomy of the Grid: Enabling Scalable Virtual Organizations

The Anatomy of the Grid: Enabling Scalable Virtual Organizations

The Emerging Grid

The Global Gridded Crop Model Intercomparison: data and modeling protocols for Phase 1 (v1.0)

article

The Globus project: a status report

article published in 1999

The Grid: Beyond the Hype

The Materials Data Facility: Data Services to Advance Materials Science Research

scholarly article by Ben Blaiszik et al published 6 July 2016 in JOM

The Model Coupling Toolkit

article

The Modern Research Data Portal: a design pattern for networked, data-intensive science

scientific article

The Open Grid Services Architecture

scholarly article published 2004

The data grid: Towards an architecture for the distributed management and analysis of large scientific datasets

article

The grid: computing without bounds

scientific article published in April 2003

The open science grid

journal article from 'Journal of Physics: Conference Series' published in 2007

TomoGAN: low-dose synchrotron x-ray tomography with generative adversarial networks: discussion

scientific article published on 01 March 2020

Toward Semantics Empowered Biomedical Web Services

Toward a new generation of agricultural system data, models, and knowledge products: State of agricultural systems science

scientific article

Towards a new generation of agricultural system data, models and knowledge products: Information and communication technology

scientific article

Trillion Parameter AI Serving Infrastructure for Scientific Discovery: A Survey and Vision

scientific article published on 03 April 2024

Uncertainty-Informed Deep Transfer Learning of Perfluoroalkyl and Polyfluoroalkyl Substance Toxicity

scientific article published on 14 December 2021

Unilateral Carbon Taxes, Border Tax Adjustments and Carbon Leakage

Using Hybrid Grid/Cloud Computing Technologies for Environmental Data Elastic Storage, Processing, and Provisioning

scholarly article published 2010

Using Run-Time Predictions to Estimate Queue Wait Times and Improve Scheduler Performance

article

Using the FACE-IT portal and workflow engine for operational food quality prediction and assessment: An application to mussel farms monitoring in the Bay of Napoli, Italy

scientific article published in 2020

Virtual Excited State Reference for the Discovery of Electronic Materials Database (VERDE Materials DB): An Open-Access Resource for Ground and Excited State Properties of Organic Molecules

scientific article published on 16 October 2019

Virtual Excited State Reference for the Discovery of Electronic Materials Database: An Open-Access Resource for Ground and Excited State Properties of Organic Molecules

scientific article published on 23 October 2019

Virtual Infrastructure Management in Private and Hybrid Clouds

Workflow-based automatic processing for Internet of Floating Things crowdsourced data

scientific article published in 2019

XDTM: The XML Data Type and Mapping for Specifying Datasets

XIOPerf: A Tool for Evaluating Network Protocols

Zero Code and Infrastructure Research Data Portals

scientific article published on 18 July 2024

Zodiac: A Comprehensive Depiction of Genetic Interactions in Cancer by Integrating TCGA Data

scientific article

caGrid 1.0: a Grid enterprise architecture for cancer research.

scientific article published on 11 October 2007

caGrid 1.0: an enterprise Grid infrastructure for biomedical research

scientific article published on 20 December 2007

e-Science, caGrid, and Translational Biomedical Research

scientific article

funcX: A Federated Function Serving Fabric for Science

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