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List of works by Odile Lecompte

A comprehensive benchmark study of multiple sequence alignment methods: current challenges and future perspectives

scientific article

Abundance and Diversification of Repetitive Elements in Decapoda Genomes

scientific article published in 2023

An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi

scientific article

Characterization of two DNA polymerases from the hyperthermophilic euryarchaeon Pyrococcus abyssi ⬇️

scientific article published on November 1, 2001

Cloning, purification and crystallization of a Walker-type Pyrococcus abyssi ATPase family member.

scientific article published on 30 September 2005

Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale

scientific article

Conjugating effects of symbionts and environmental factors on gene expression in deep-sea hydrothermal vent mussels

scientific article

Dataset of the de novo assembly and annotation of the marbled crayfish and the noble crayfish hepatopancreas transcriptomes

scientific article published in 2022

Detecting the molecular scars of evolution in the Mycobacterium tuberculosis complex by analyzing interrupted coding sequences

scientific article

Detection and characterisation of mutations responsible for allele-specific protein thermostabilities at the Mn-superoxide dismutase gene in the deep-sea hydrothermal vent polychaete Alvinella pompejana

scientific article

Determining gene flow and the influence of selection across the equatorial barrier of the East Pacific Rise in the tube-dwelling polychaete Alvinella pompejana

scientific article

Evolutionary analysis of the ENTH/ANTH/VHS protein superfamily reveals a coevolution between membrane trafficking and metabolism.

scientific article

Functional characterization and high-throughput proteomic analysis of interrupted genes in the archaeon Sulfolobus solfataricus

scientific article published in May 2010

Functional insights into the core-TFIIH from a comparative survey

scientific article published on 10 November 2012

Genome-wide evidence for an essential role of the human Staf/ZNF143 transcription factor in bidirectional transcription

scientific article

Genome-wide in silico identification of new conserved and functional retinoic acid receptor response elements (direct repeats separated by 5 bp)

scientific article

ICDS database: interrupted CoDing sequences in prokaryotic genomes

scientific article

Insights into Ciliary Genes and Evolution from Multi-Level Phylogenetic Profiling

scientific article

Insights into metazoan evolution from Alvinella pompejana cDNAs

scientific article (publication date: 16 November 2010)

Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?

scientific article published on January 2007

KD4v: Comprehensible Knowledge Discovery System for Missense Variant

scientific article

MyGeneFriends: A Social Network Linking Genes, Genetic Diseases, and Researchers

scientific article

Novel Approach Combining Transcriptional and Evolutionary Signatures to Identify New Multiciliation Genes

scientific article published in 2021

Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol.

scientific article published on 27 October 2008

OrthoInspector 2.0: Software and database updates

scientific article

OrthoInspector 3.0: open portal for comparative genomics

scientific article published on 01 January 2019

OrthoInspector: comprehensive orthology analysis and visual exploration

scientific article

PARSEC: PAtteRn SEarch and Contextualization

scientific article

PROBE: analysis and visualization of protein block-level evolution

scientific article published on 01 October 2018

PipeAlign: A new toolkit for protein family analysis

scientific article

Proteome Evolution of Deep-Sea Hydrothermal Vent Alvinellid Polychaetes Supports the Ancestry of Thermophily and Subsequent Adaptation to Cold in Some Lineages

scientific article published on 12 January 2017

Proteome adaptation to high temperatures in the ectothermic hydrothermal vent Pompeii worm

scientific article

Proteome-scale detection of differential conservation patterns at protein and sub-protein levels with BLUR

scientific article published on 19 November 2020

PtdIns5P regulation through evolution: roles in membrane trafficking?

scientific article published on 05 September 2008

Retinoic acid receptor subtype-specific transcriptotypes in the early zebrafish embryo

scientific article

SM2PH-db: an interactive system for the integrated analysis of phenotypic consequences of missense mutations in proteins involved in human genetic diseases.

scientific article published on February 2010

Standardized benchmarking in the quest for orthologs

scientific article (publication date: 4 April 2016)

Temporal dynamics of the immune response in Astacus astacus (Linnaeus, 1758) challenged with Aphanomyces astaci Schikora, 1906

scientific article published in 2023

Ten Years of Collaborative Progress in the Quest for Orthologs

scientific article published on 2 April 2021

Tex19 and Sectm1 concordant molecular phylogenies support co-evolution of both eutherian-specific genes

scientific article published on 12 October 2015

The Quest for Orthologs benchmark service and consensus calls in 2020

scientific article published on 06 May 2020

Whole-Exome Sequencing Identifies Mutations in GPR179 Leading to Autosomal-Recessive Complete Congenital Stationary Night Blindness

scientific article published in July 2012

Whole-exome sequencing identifies LRIT3 mutations as a cause of autosomal-recessive complete congenital stationary night blindness

scientific article

Whole-exome sequencing identifies mutations in GPR179 leading to autosomal-recessive complete congenital stationary night blindness

scientific article

vALId: validation of protein sequence quality based on multiple alignment data

scientific article

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