Search filters

List of works by Katia Koelle

A dimensionless number for understanding the evolutionary dynamics of antigenically variable RNA viruses

scientific article published on 4 May 2011

A two-tiered model for simulating the ecological and evolutionary dynamics of rapidly evolving viruses, with an application to influenza

scientific article

Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks

scientific article published on 23 August 2021

Assessing the potential of a candidate dengue vaccine with mathematical modeling

scientific article (publication date: 2012)

Asymptomatic Infection and Transmission of Pertussis in Households: A Systematic Review

scientific article published on 01 January 2020

Capturing escape in infectious disease dynamics

scientific article published on 19 August 2008

Causes and Consequences of Spatial Within-Host Viral Spread

scientific article published on 13 November 2018

Cellular co-infection can modulate the efficiency of influenza A virus production and shape the interferon response

scientific article published on 16 October 2020

Coalescent Entanglement and the Conditional Dependence of the Times to Common Ancestry of Mutually Exclusive Pairs of Individuals

scientific article published on 16 October 2012

Correction for Sobel Leonard et al., "Transmission Bottleneck Size Estimation from Pathogen Deep-Sequencing Data, with an Application to Human Influenza A Virus"

scientific article published on 13 August 2019

Decreases in dengue transmission may act to increase the incidence of dengue hemorrhagic fever

scholarly article

Deep Sequencing of Influenza A Virus from a Human Challenge Study Reveals a Selective Bottleneck and Only Limited Intrahost Genetic Diversification

scientific article published on 05 October 2016

Disentangling extrinsic from intrinsic factors in disease dynamics: a nonlinear time series approach with an application to cholera

scientific article

Drivers of Inter-individual Variation in Dengue Viral Load Dynamics

scientific article (publication date: 17 November 2016)

Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans

scientific article

Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel

scientific article published on 22 May 2020

Global patterns in seasonal activity of influenza A/H3N2, A/H1N1, and B from 1997 to 2005: viral coexistence and latitudinal gradients

scientific article

Hyperinfectivity in cholera: a new mechanism for an old epidemiological model?

scientific article published on 27 June 2006

Impact of cross-protective vaccines on epidemiological and evolutionary dynamics of influenza

scientific article

Inference for nonlinear epidemiological models using genealogies and time series

scientific article

Influenza: Prediction is worth a shot

scientific article published on 26 February 2014

Intrahost cytomegalovirus population genetics following antibody pretreatment in a monkey model of congenital transmission

scientific article published on 14 February 2020

Intrahost dynamics of human cytomegalovirus variants acquired by seronegative glycoprotein B vaccinees

scientific article published on 19 February 2019

Minimal within-host dengue models highlight the specific roles of the immune response in primary and secondary dengue infections

scientific article

Navigating the Devious Course of Evolution: The Importance of Mechanistic Models for Identifying Eco-Evolutionary Dynamics in Nature ⬇️

scientific article published on March 15, 2013

Network perspectives on infectious disease dynamics

scientific article published on January 2011

Pathogen adaptation to seasonal forcing and climate change

scholarly article by Katia Koelle et al published 7 May 2005 in Proceedings of the Royal Society B

Phylodynamic inference and model assessment with approximate bayesian computation: influenza as a case study

scientific article

Phylodynamic inference for structured epidemiological models

scientific article

Preexisting antibodies can protect against congenital cytomegalovirus infection in monkeys.

scientific article

Rates of coalescence for common epidemiological models at equilibrium

scientific article

Reconciling phylodynamics with epidemiology: the case of dengue virus in southern Vietnam

scientific article published on 22 October 2013

Refractory periods and climate forcing in cholera dynamics

scientific article

Selection on non-antigenic gene segments of seasonal influenza A virus and its impact on adaptive evolution

scientific article published in July 2017

Selection on non-antigenic gene segments of seasonal influenza A virus and its impact on adaptive evolution

article

Serotype cycles in cholera dynamics

scientific article published in November 2006

The Long-Term Safety, Public Health Impact, and Cost-Effectiveness of Routine Vaccination with a Recombinant, Live-Attenuated Dengue Vaccine (Dengvaxia): A Model Comparison Study

scientific article

The effective rate of influenza reassortment is limited during human infection

scientific article

The effects of a deleterious mutation load on patterns of influenza A/H3N2's antigenic evolution in humans

scientific article

The effects of host contact network structure on pathogen diversity and strain structure

scholarly article

The evolutionary dynamics of receptor binding avidity in influenza A: a mathematical model for a new antigenic drift hypothesis

scientific article published on 04 February 2013

The impact of host immune status on the within-host and population dynamics of antigenic immune escape ⬇️

scientific article published on May 9, 2012

Transmission Bottleneck Size Estimation from Pathogen Deep-Sequencing Data, with an Application to Human Influenza A Virus

scientific article

Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck

scientific article published on 17 November 2020

Transmission-clearance trade-offs indicate that dengue virulence evolution depends on epidemiological context.

scientific article

Understanding the dynamics of rapidly evolving pathogens through modeling the tempo of antigenic change: Influenza as a case study ⬇️

scientific article published on June 2, 2009

Unrecognized introductions of SARS-CoV-2 into the US state of Georgia shaped the early epidemic

scientific article published on 15 February 2022

Viral Phylodynamics

scientific article published on 21 March 2013

Viral substitution rate variation can arise from the interplay between within-host and epidemiological dynamics

scientific article published on 20 August 2013

Why Are CD8 T Cell Epitopes of Human Influenza A Virus Conserved?

scientific article published on 05 March 2019

Within-host infectious disease models accommodating cellular coinfection, with an application to influenza

scientific article published on 08 July 2019

Paulina is supported by:

About Paulina

Help