List of works - Katsuya Gomi

A Novel Zn2-Cys6 Transcription Factor AtrR Plays a Key Role in an Azole Resistance Mechanism of Aspergillus fumigatus by Co-regulating cyp51A and cdr1B Expressions

scientific article

A defect of LigD (human Lig4 homolog) for nonhomologous end joining significantly improves efficiency of gene-targeting in Aspergillus oryzae.

scientific article

Alternative processing of proproteins in Aspergilli kexB gene disruptants under hyperosmotic conditions

scientific article published on 7 January 2009

Alternative transcription start sites of the enolase-encoding gene enoA are stringently used in glycolytic/gluconeogenic conditions in Aspergillus oryzae

scientific article published on 18 February 2020

Analysis of expressed sequence tags from the fungus Aspergillus oryzae cultured under different conditions

scientific article

Aspartyl Aminopeptidase Is Imported from the Cytoplasm to the Vacuole by Selective Autophagy in Saccharomyces cerevisiae ⬇️

scientific article published on February 22, 2011

Aspergillus luchuensis, an industrially important black Aspergillus in East Asia

scientific article

Aspergillus oryzae atfA controls conidial germination and stress tolerance

scientific article published on 19 September 2009

Aspergillus oryzae atfB encodes a transcription factor required for stress tolerance in conidia

scientific article published on 25 March 2008

AtrR Is an Essential Determinant of Azole Resistance in Aspergillus fumigatus

scientific article published on 12 March 2019

Biosynthesis of Shearinine: Diversification of a Tandem Prenyl Moiety of Fungal Indole Diterpenes.

scientific article

Biosynthetic Machinery of Diterpene Pleuromutilin Isolated from Basidiomycete Fungi.

scientific article published on 19 September 2017

Biosynthetic Study on Antihypercholesterolemic Agent Phomoidride: General Biogenesis of Fungal Dimeric Anhydrides

scientific article published on 11 November 2015

Biosynthetic assembly of cytochalasin backbone

scientific article published in 2013

Cell wall α-1,3-glucan prevents α-amylase adsorption onto fungal cell in submerged culture of Aspergillus oryzae

scientific article published on 26 March 2017

Cellular responses to the expression of unstable secretory proteins in the filamentous fungus Aspergillus oryzae

scientific article published on 7 January 2017

Chaperone complex formation of the transcription factor MalR involved in maltose utilization and amylolytic enzyme production in Aspergillus oryzae

scientific article published on 8 March 2018

Characterization and expression analysis of a maltose-utilizing (MAL) cluster in Aspergillus oryzae

scientific article published in January 2010

Cloning and nucleotide sequence of the acid protease-encoding gene (pepA) from Aspergillus oryzae.

scientific article

Cloning, nucleotide sequencing, and expression of the beta-galactosidase-encoding gene (lacA) from Aspergillus oryzae

article

Codon optimization increases steady-state mRNA levels in Aspergillus oryzae heterologous gene expression.

scientific article published on 12 September 2008

Construction of a thiamine pyrophosphate high-producing strain of Aspergillus oryzae by overexpression of three genes involved in thiamine biosynthesis ⬇️

scientific article published on January 17, 2011

Crawler, a novel Tc1/mariner-type transposable element in Aspergillus oryzae transposes under stress conditions.

scientific article published on 6 March 2009

Distinct mechanism of activation of two transcription factors, AmyR and MalR, involved in amylolytic enzyme production in Aspergillus oryzae.

scientific article published on 9 December 2014

Effects of codon optimization on the mRNA levels of heterologous genes in filamentous fungi.

scientific article published on 28 February 2014

Efficient production of recombinant tannase in Aspergillus oryzae using an improved glucoamylase gene promoter

scientific article published on 03 September 2019

Endocytosis of a maltose permease is induced when amylolytic enzyme production is repressed in Aspergillus oryzae.

scientific article published on 24 June 2015

Erratum to “Characterization and expression analysis of a maltose-utilizing (MAL) cluster in Aspergillus oryzae” [Fungal Genet. Biol. 47 (2010) 1–9]

scholarly article published in Fungal Genetics and Biology

Erratum: Corrigendum: Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

scientific article published in Nature

Evaluation of baker's yeast strains exhibiting significant growth on Japanese beet molasses and compound analysis of the molasses types.

scientific article published on 14 December 2013

Functional analysis of FarA transcription factor in the regulation of the genes encoding lipolytic enzymes and hydrophobic surface binding protein for the degradation of biodegradable plastics in Aspergillus oryzae.

scientific article

Fusion of an intact secretory protein permits a misfolded protein to exit from the endoplasmic reticulum in yeast

scientific article published on 10 April 2014

Genome Mining for Sesterterpenes Using Bifunctional Terpene Synthases Reveals a Unified Intermediate of Di/Sesterterpenes

scientific article published on 04 September 2015

Genome sequence of Aspergillus luchuensis NBRC 4314.

scientific article published on 20 September 2016

Genome sequencing and analysis of Aspergillus oryzae

scientific article

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

scientific article

Genomics of Aspergillus oryzae.

scientific article published on 7 March 2007

Genomics of Aspergillus oryzae: learning from the history of Koji mold and exploration of its future

scientific article

Heterologous Biosynthesis of Fungal Indole Sesquiterpene Sespendole

scientific article published on 19 June 2018

Heterologous Expression ofAspergillus oryzaeXylose Reductase and Xylitol Dehydrogenase Genes Facilitated Xylose Utilization in the YeastSaccharomyces cerevisiae

article

Heterologous Production of a Novel Cyclic Peptide Compound, KK-1, in Aspergillus oryzae ⬇️

scientific article published on 9 April 2018

Heterologous expression of highly reducing polyketide synthase involved in betaenone biosynthesis

scientific article published on 01 February 2015

Identification of ophiobolin F synthase by a genome mining approach: a sesterterpene synthase from Aspergillus clavatus

scientific article

Identification of potential cell wall component that allows Taka-amylase A adsorption in submerged cultures of Aspergillus oryzae

article

Improved α-Amylase Production by Dephosphorylation Mutation of CreD, an Arrestin-Like Protein Required for Glucose-Induced Endocytosis of Maltose Permease and Carbon Catabolite Derepression in Aspergillus oryzae.

scientific article published on 28 April 2017

Improved α-amylase production by Aspergillus oryzae after a double deletion of genes involved in carbon catabolite repression.

scientific article

In silico Analysis of 3'-End-Processing Signals in Aspergillus oryzae Using Expressed Sequence Tags and Genomic Sequencing Data ⬇️

scientific article published on May 17, 2011

Increased enzyme production under liquid culture conditions in the industrial fungus Aspergillus oryzae by disruption of the genes encoding cell wall α-1,3-glucan synthase

scientific article published on 21 July 2016

Increased production of biomass-degrading enzymes by double deletion of creA and creB genes involved in carbon catabolite repression in Aspergillus oryzae

article

Induction of autophagy by phosphate starvation in an Atg11-dependent manner in Saccharomyces cerevisiae.

scientific article published on 21 December 2016

Mapping haze-komi on rice koji grains using β-glucuronidase expressing Aspergillus oryzae and mass spectrometry imaging

scientific article published on 15 October 2019

Modified Cre-loxP recombination in Aspergillus oryzae by direct introduction of Cre recombinase for marker gene rescue

scientific article

Multiple Oxidative Modifications in the Ophiobolin Biosynthesis: P450 Oxidations Found in Genome Mining

scientific article published on 26 April 2016

Novel hydrophobic surface binding protein, HsbA, produced by Aspergillus oryzae

scientific article

Nuclear export-dependent degradation of the carbon catabolite repressor CreA is regulated by a region located near the C-terminus in Aspergillus oryzae

scientific article published on 05 October 2018

Purification and characterization of a biodegradable plastic-degrading enzyme from Aspergillus oryzae

scientific article published on 27 January 2005

Purification and enzymatic characterization of a novel β-1,6-glucosidase from Aspergillus oryzae

scientific article published on 29 August 2015

Purification and enzymatic characterization of secretory glycoside hydrolase family 3 (GH3) aryl β-glucosidases screened from Aspergillus oryzae genome

scientific article published on 27 April 2015

Quantitative evaluation of haze formation of koji and progression of internal haze by drying of koji during koji making.

scientific article

Rapid reconstitution of biosynthetic machinery for fungal metabolites in Aspergillus oryzae: total biosynthesis of aflatrem.

scientific article published in August 2014

Reconstitution of Biosynthetic Machinery for Indole-Diterpene Paxilline in Aspergillus oryzae ⬇️

scientific article published on January 15, 2013

Reconstitution of Biosynthetic Machinery for the Synthesis of the Highly Elaborated Indole Diterpene Penitrem

article published in 2015

Reconstitution of biosynthetic machinery for the synthesis of the highly elaborated indole diterpene penitrem.

scientific article published on April 2015

Reconstitution of biosynthetic machinery of fungal polyketides: unexpected oxidations of biosynthetic intermediates by expression host

scientific article published on 5 November 2015

Regulatory mechanisms for amylolytic gene expression in the koji mold Aspergillus oryzae

scientific article published on 04 June 2019

Self-excising Cre/mutant lox marker recycling system for multiple gene integrations and consecutive gene deletions in Aspergillus oryzae.

scientific article

Signaling pathways for stress responses and adaptation in Aspergillus species: stress biology in the post-genomic era.

scientific article published on 23 March 2016

Structurally Diverse Chaetophenol Productions Induced by Chemically Mediated Epigenetic Manipulation of Fungal Gene Expression ⬇️

scientific article published on June 14, 2013

Subcellular localization of aphidicolin biosynthetic enzymes heterologously expressed in Aspergillus oryzae

scientific article published in December 2017

Substantial decrease in cell wall α-1,3-glucan caused by disruption of the kexB gene encoding a subtilisin-like processing protease in Aspergillus oryzae

scientific article published on 15 March 2016

Subtractive cloning of cDNA from Aspergillus oryzae differentially regulated between solid-state culture and liquid (submerged) culture

scientific article

The C-terminal region of the yeast monocarboxylate transporter Jen1 acts as a glucose signal-responding degron recognized by the α-arrestin Rod1

scientific article published in Journal of Biological Chemistry

The C2H2-type transcription factor, FlbC, is involved in the transcriptional regulation of Aspergillus oryzae glucoamylase and protease genes specifically expressed in solid-state culture.

scientific article

The PDR-type ABC transporters AtrA and AtrG are involved in azole drug resistance in Aspergillus oryzae

scientific article published on 16 July 2018

The fungal hydrophobin RolA recruits polyesterase and laterally moves on hydrophobic surfaces

scientific article published in September 2005

Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5'-UTR

scientific article (publication date: 18 December 2003)

Total Biosynthesis of Brassicicenes: Identification of a Key Enzyme for Skeletal Diversification

scientific article published on 19 September 2018

Total biosynthesis of diterpene aphidicolin, a specific inhibitor of DNA polymerase α: heterologous expression of four biosynthetic genes in Aspergillus oryzae.

scientific article published on 7 September 2011

Transcriptional analysis of genes for energy catabolism and hydrolytic enzymes in the filamentous fungus Aspergillus oryzae using cDNA microarrays and expressed sequence tags

scientific article published on 20 May 2004

Transcripts of a heterologous gene encoding mite allergen Der f 7 are stabilized by codon optimization in Aspergillus oryzae

scientific article published on 31 May 2012

Unfolded protein response is required for Aspergillus oryzae growth under conditions inducing secretory hydrolytic enzyme production.

scientific article published on 21 October 2015

Unveiling the Biosynthetic Pathway of the Ribosomally Synthesized and Post-translationally Modified Peptide Ustiloxin B in Filamentous Fungi

scientific article published on 11 May 2016

Use of a biosynthetic intermediate to explore the chemical diversity of pseudo-natural fungal polyketides

scientific article published on 03 August 2015

chsZ, a gene for a novel class of chitin synthase from Aspergillus oryzae

article

List of works by Katsuya Gomi

A Novel Zn2-Cys6 Transcription Factor AtrR Plays a Key Role in an Azole Resistance Mechanism of Aspergillus fumigatus by Co-regulating cyp51A and cdr1B Expressions

A defect of LigD (human Lig4 homolog) for nonhomologous end joining significantly improves efficiency of gene-targeting in Aspergillus oryzae.

Alternative processing of proproteins in Aspergilli kexB gene disruptants under hyperosmotic conditions

Alternative transcription start sites of the enolase-encoding gene enoA are stringently used in glycolytic/gluconeogenic conditions in Aspergillus oryzae

Analysis of expressed sequence tags from the fungus Aspergillus oryzae cultured under different conditions

Aspartyl Aminopeptidase Is Imported from the Cytoplasm to the Vacuole by Selective Autophagy in Saccharomyces cerevisiae ⬇️

Aspergillus luchuensis, an industrially important black Aspergillus in East Asia

Aspergillus oryzae atfA controls conidial germination and stress tolerance

Aspergillus oryzae atfB encodes a transcription factor required for stress tolerance in conidia

AtrR Is an Essential Determinant of Azole Resistance in Aspergillus fumigatus

Biosynthesis of Shearinine: Diversification of a Tandem Prenyl Moiety of Fungal Indole Diterpenes.

Biosynthetic Machinery of Diterpene Pleuromutilin Isolated from Basidiomycete Fungi.

Biosynthetic Study on Antihypercholesterolemic Agent Phomoidride: General Biogenesis of Fungal Dimeric Anhydrides

Biosynthetic assembly of cytochalasin backbone

Cell wall α-1,3-glucan prevents α-amylase adsorption onto fungal cell in submerged culture of Aspergillus oryzae

Cellular responses to the expression of unstable secretory proteins in the filamentous fungus Aspergillus oryzae

Chaperone complex formation of the transcription factor MalR involved in maltose utilization and amylolytic enzyme production in Aspergillus oryzae

Characterization and expression analysis of a maltose-utilizing (MAL) cluster in Aspergillus oryzae

Cloning and nucleotide sequence of the acid protease-encoding gene (pepA) from Aspergillus oryzae.

Cloning, nucleotide sequencing, and expression of the beta-galactosidase-encoding gene (lacA) from Aspergillus oryzae

Codon optimization increases steady-state mRNA levels in Aspergillus oryzae heterologous gene expression.

Construction of a thiamine pyrophosphate high-producing strain of Aspergillus oryzae by overexpression of three genes involved in thiamine biosynthesis ⬇️

Crawler, a novel Tc1/mariner-type transposable element in Aspergillus oryzae transposes under stress conditions.

Distinct mechanism of activation of two transcription factors, AmyR and MalR, involved in amylolytic enzyme production in Aspergillus oryzae.

Effects of codon optimization on the mRNA levels of heterologous genes in filamentous fungi.

Efficient production of recombinant tannase in Aspergillus oryzae using an improved glucoamylase gene promoter

Endocytosis of a maltose permease is induced when amylolytic enzyme production is repressed in Aspergillus oryzae.

Erratum to “Characterization and expression analysis of a maltose-utilizing (MAL) cluster in Aspergillus oryzae” [Fungal Genet. Biol. 47 (2010) 1–9]

Erratum: Corrigendum: Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

Evaluation of baker's yeast strains exhibiting significant growth on Japanese beet molasses and compound analysis of the molasses types.

Functional analysis of FarA transcription factor in the regulation of the genes encoding lipolytic enzymes and hydrophobic surface binding protein for the degradation of biodegradable plastics in Aspergillus oryzae.

Fusion of an intact secretory protein permits a misfolded protein to exit from the endoplasmic reticulum in yeast

Genome Mining for Sesterterpenes Using Bifunctional Terpene Synthases Reveals a Unified Intermediate of Di/Sesterterpenes

Genome sequence of Aspergillus luchuensis NBRC 4314.

Genome sequencing and analysis of Aspergillus oryzae

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

Genomics of Aspergillus oryzae.

Genomics of Aspergillus oryzae: learning from the history of Koji mold and exploration of its future

Heterologous Biosynthesis of Fungal Indole Sesquiterpene Sespendole

Heterologous Expression ofAspergillus oryzaeXylose Reductase and Xylitol Dehydrogenase Genes Facilitated Xylose Utilization in the YeastSaccharomyces cerevisiae

Heterologous Production of a Novel Cyclic Peptide Compound, KK-1, in Aspergillus oryzae ⬇️

Heterologous expression of highly reducing polyketide synthase involved in betaenone biosynthesis

Identification of ophiobolin F synthase by a genome mining approach: a sesterterpene synthase from Aspergillus clavatus

Identification of potential cell wall component that allows Taka-amylase A adsorption in submerged cultures of Aspergillus oryzae

Improved α-Amylase Production by Dephosphorylation Mutation of CreD, an Arrestin-Like Protein Required for Glucose-Induced Endocytosis of Maltose Permease and Carbon Catabolite Derepression in Aspergillus oryzae.

Improved α-amylase production by Aspergillus oryzae after a double deletion of genes involved in carbon catabolite repression.

In silico Analysis of 3'-End-Processing Signals in Aspergillus oryzae Using Expressed Sequence Tags and Genomic Sequencing Data ⬇️

Increased enzyme production under liquid culture conditions in the industrial fungus Aspergillus oryzae by disruption of the genes encoding cell wall α-1,3-glucan synthase

Increased production of biomass-degrading enzymes by double deletion of creA and creB genes involved in carbon catabolite repression in Aspergillus oryzae

Induction of autophagy by phosphate starvation in an Atg11-dependent manner in Saccharomyces cerevisiae.

Mapping haze-komi on rice koji grains using β-glucuronidase expressing Aspergillus oryzae and mass spectrometry imaging

Modified Cre-loxP recombination in Aspergillus oryzae by direct introduction of Cre recombinase for marker gene rescue

Multiple Oxidative Modifications in the Ophiobolin Biosynthesis: P450 Oxidations Found in Genome Mining

Novel hydrophobic surface binding protein, HsbA, produced by Aspergillus oryzae

Nuclear export-dependent degradation of the carbon catabolite repressor CreA is regulated by a region located near the C-terminus in Aspergillus oryzae

Purification and characterization of a biodegradable plastic-degrading enzyme from Aspergillus oryzae

Purification and enzymatic characterization of a novel β-1,6-glucosidase from Aspergillus oryzae

Purification and enzymatic characterization of secretory glycoside hydrolase family 3 (GH3) aryl β-glucosidases screened from Aspergillus oryzae genome

Quantitative evaluation of haze formation of koji and progression of internal haze by drying of koji during koji making.

Rapid reconstitution of biosynthetic machinery for fungal metabolites in Aspergillus oryzae: total biosynthesis of aflatrem.

Reconstitution of Biosynthetic Machinery for Indole-Diterpene Paxilline in Aspergillus oryzae ⬇️

Reconstitution of Biosynthetic Machinery for the Synthesis of the Highly Elaborated Indole Diterpene Penitrem

Reconstitution of biosynthetic machinery for the synthesis of the highly elaborated indole diterpene penitrem.

Reconstitution of biosynthetic machinery of fungal polyketides: unexpected oxidations of biosynthetic intermediates by expression host

Regulatory mechanisms for amylolytic gene expression in the koji mold Aspergillus oryzae

Self-excising Cre/mutant lox marker recycling system for multiple gene integrations and consecutive gene deletions in Aspergillus oryzae.

Signaling pathways for stress responses and adaptation in Aspergillus species: stress biology in the post-genomic era.

Structurally Diverse Chaetophenol Productions Induced by Chemically Mediated Epigenetic Manipulation of Fungal Gene Expression ⬇️

Subcellular localization of aphidicolin biosynthetic enzymes heterologously expressed in Aspergillus oryzae

Substantial decrease in cell wall α-1,3-glucan caused by disruption of the kexB gene encoding a subtilisin-like processing protease in Aspergillus oryzae

Subtractive cloning of cDNA from Aspergillus oryzae differentially regulated between solid-state culture and liquid (submerged) culture

The C-terminal region of the yeast monocarboxylate transporter Jen1 acts as a glucose signal-responding degron recognized by the α-arrestin Rod1

The C2H2-type transcription factor, FlbC, is involved in the transcriptional regulation of Aspergillus oryzae glucoamylase and protease genes specifically expressed in solid-state culture.

The PDR-type ABC transporters AtrA and AtrG are involved in azole drug resistance in Aspergillus oryzae

The fungal hydrophobin RolA recruits polyesterase and laterally moves on hydrophobic surfaces

Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5'-UTR

Total Biosynthesis of Brassicicenes: Identification of a Key Enzyme for Skeletal Diversification

Total biosynthesis of diterpene aphidicolin, a specific inhibitor of DNA polymerase α: heterologous expression of four biosynthetic genes in Aspergillus oryzae.

Transcriptional analysis of genes for energy catabolism and hydrolytic enzymes in the filamentous fungus Aspergillus oryzae using cDNA microarrays and expressed sequence tags