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List of works by Yongchun Zuo

Amino Acid Reduction Can Help to Improve the Identification of Antimicrobial Peptides and Their Functional Activities

scientific article published on 20 April 2021

Analysis and identification of essential genes in humans using topological properties and biological information

scientific article published on 27 August 2014

Analysis and identification of toxin targets by topological properties in protein-protein interaction network

scientific article published on 7 February 2014

Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions

scientific article published on 16 November 2018

Association analysis between the distributions of histone modifications and gene expression in the human embryonic stem cell.

scientific article published on 21 August 2015

Characterization of BioPlex network by topological properties

scientific article

Characterization of TATA-containing genes and TATA-less genes in S. cerevisiae by network topologies and biological properties

scientific article published on 14 October 2014

Characterization of essential genes by topological properties in the perturbation sensitivity network.

scientific article published on 4 May 2014

Characterization of proteins in S. cerevisiae with subcellular localizations.

scientific article published on May 2015

Comparative analysis of housekeeping and tissue-selective genes in human based on network topologies and biological properties.

scientific article

Discrimination of membrane transporter protein types using K-nearest neighbor method derived from the similarity distance of total diversity measure

scientific article published on 21 January 2015

EmExplorer: a database for exploring time activation of gene expression in mammalian embryos

scientific article published on 05 June 2019

Exploring timing activation of functional pathway based on differential co-expression analysis in preimplantation embryogenesis

scientific article published on 29 September 2016

Function determinants of TET proteins: the arrangements of sequence motifs with specific codes

scientific article published on 01 September 2019

Gene expression classification using epigenetic features and DNA sequence composition in the human embryonic stem cell line H1.

scientific article published on 25 July 2016

Genome-wide analysis of H3K36me3 and its regulations to cancer-related genes expression in human cell lines

scientific article published on 17 July 2018

Genome-wide characterization of essential, toxicity-modulating and no-phenotype genes in S. cerevisiae.

scientific article published on 7 January 2015

High-Quality Genome Assembly and Genome-Wide Association Study of Male Sterility Provide Resources for Flax Improvement

scientific article published in 2023

Human proteins characterization with subcellular localizations.

scientific article published on 23 May 2014

Identification of TATA and TATA-less promoters in plant genomes by integrating diversity measure, GC-Skew and DNA geometric flexibility.

scientific article

Immune cell infiltration-based signature for prognosis and immunogenomic analysis in breast cancer

scientific article published on 06 March 2020

Integrating transcriptomics and metabolomics to characterise the response of Astragalus membranaceus Bge. var. mongolicus (Bge.) to progressive drought stress

scientific article

Irregular transcriptome reprogramming probably causes thec developmental failure of embryos produced by interspecies somatic cell nuclear transfer between the Przewalski's gazelle and the bovine

scientific article

Multi-substrate selectivity based on key loops and non-homologous domains: new insight into ALKBH family

scientific article published on 08 July 2020

PreDNA: accurate prediction of DNA-binding sites in proteins by integrating sequence and geometric structure information.

scientific article

Predicting peroxidase subcellular location by hybridizing different descriptors of Chou' pseudo amino acid patterns.

scientific article published on 04 May 2014

Predicting the types of J-proteins using clustered amino acids.

scientific article

RAACBook: a web server of reduced amino acid alphabet for sequence-dependent inference by using Chou's five-step rule

scientific article published on 01 January 2019

RaacLogo: a new sequence logo generator by using reduced amino acid clusters

scientific article published on 10 June 2020

Sequence-specific flexibility organization of splicing flanking sequence and prediction of splice sites in the human genome

scientific article published on 12 April 2014

The effect of regions flanking target site on siRNA potency.

scientific article

Topological characteristics of target genes regulated by abiotic-stress-responsible miRNAs in a rice interactome network

scientific article

Using reduced amino acid composition to predict defensin family and subfamily: Integrating similarity measure and structural alphabet.

scientific article published on 8 July 2009

acACS: improving the prediction accuracy of protein subcellular locations and protein classification by incorporating the average chemical shifts composition.

scientific article published on 2 July 2014

iDEF-PseRAAC: Identifying the Defensin Peptide by Using Reduced Amino Acid Composition Descriptor

scientific article published on 31 July 2019

iDPF-PseRAAAC: A Web-Server for Identifying the Defensin Peptide Family and Subfamily Using Pseudo Reduced Amino Acid Alphabet Composition

scientific article

iNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical properties

scientific article

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