List of works - Elizabeth Dinsdale

A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes

scientific article

Abrolhos bank reef health evaluated by means of water quality, microbial diversity, benthic cover, and fish biomass data

scientific article (publication date: 2012)

Assembly rules of reef corals are flexible along a steep climatic gradient

scientific article

Assessing anchor damage on coral reefs: a case study in selection of environmental indicators

scientific article

Aura-biomes are present in the water layer above coral reef benthic macro-organisms.

scientific article

Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle

scientific article

Barriers to Integration of Bioinformatics into Undergraduate Life Sciences Education

article

Baseline Assessment of Mesophotic Reefs of the Vitória-Trindade Seamount Chain Based on Water Quality, Microbial Diversity, Benthic Cover and Fish Biomass Data

scientific article

Baselines and degradation of coral reefs in the Northern Line Islands.

scientific article

Bioinformatics Core Competencies for Undergraduate Life Sciences Education

article

Bioinformatics core competencies for undergraduate life sciences education.

scientific article

Black reefs: iron-induced phase shifts on coral reefs

scientific article

Can we measure beauty? Computational evaluation of coral reef aesthetics

scientific article published on 10 November 2015

Characterization of the ELPhiS prophage from Salmonella enterica serovar Enteritidis strain LK5.

scientific article published on 13 January 2012

Combining de novo and reference-guided assembly with scaffold_builder

scientific article

Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions

scientific article published on 5 August 2014

Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome

scientific article

Copper tolerance and distribution of epibiotic bacteria associated with giant kelp Macrocystis pyrifera in southern California.

scientific article published on 18 April 2015

Dissecting microbial employment

scientific article published on 01 September 2008

Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome

scientific article published on 9 January 2017

Do the organic sulfur compounds DMSP and DMS drive coral microbial associations?

scientific article

Draft Genome Sequence of the Fish Pathogen Piscirickettsia salmonis

scientific article published on 7 November 2013

Elevated temperature drives kelp microbiome dysbiosis, while elevated carbon dioxide induces water microbiome disruption.

scientific article published on 23 February 2018

Functional metagenomic profiling of nine biomes

scientific article (publication date: 3 April 2008)

Functional metagenomic profiling of nine biomes

scientific article published in Nature

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

scientific article

Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum

scientific article published on 3 June 2015

Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes

scientific article published on 05 February 2020

Global microbialization of coral reefs.

scientific article

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

scientific article published on 08 July 2019

Hyperspectral and physiological analyses of coral-algal interactions

scientific article

Latitude and chlorophyll a density drive the distribution of carbohydrate-active enzymes (CAZymes) in the planktonic microbial fraction of the epipelagic zone

scientific article published on 30 June 2020

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.

scientific article

Metagenomic analysis of stressed coral holobionts

scientific article published on 22 April 2009

Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico

scientific article

Metagenomic insights into anaerobic metabolism along an Arctic peat soil profile.

scientific article

Microbial ecology of four coral atolls in the Northern Line Islands.

scientific article

Microbial processes driving coral reef organic carbon flow.

scientific article published on 9 May 2017

Mitochondrial genome of the Silvertip shark, Carcharhinus albimarginatus, from the British Indian Ocean Territory

scientific article published on 14 May 2020

Mitochondrial genome of the Smoothnose wedgefish Rhynchobatus laevis from the Western Indian Ocean

scientific article published on 14 May 2020

Mitochondrial genome of the silky shark Carcharhinus falciformis from the British Indian Ocean Territory Marine Protected Area

scientific article published on 11 June 2020

Modeling of the Coral Microbiome: the Influence of Temperature and Microbial Network

scientific article published on 03 March 2020

Multivariate analysis of functional metagenomes.

scientific article published on 2 April 2013

NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education

scientific article published on January 2015

Nearshore Pelagic Microbial Community Abundance Affects Recruitment Success of Giant Kelp, Macrocystis pyrifera

scientific article

Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes.

scientific article published on 28 November 2017

Oxygen minimum zones harbour novel viral communities with low diversity

scientific article

Rhodoliths holobionts in a changing ocean: host-microbes interactions mediate coralline algae resilience under ocean acidification

scientific article published on 24 September 2018

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition

scientific article

Substrate type determines metagenomic profiles from diverse chemical habitats

scientific article

The Epidermal Microbiome Within an Aggregation of Leopard Sharks (Triakis semifasciata) Has Taxonomic Flexibility with Gene Functional Stability Across Three Time-points

scientific article published in 2022

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

scientific article

The lagoon at Caroline/Millennium atoll, Republic of Kiribati: natural history of a nearly pristine ecosystem

scientific article

The skin microbiome of the common thresher shark (Alopias vulpinus) has low taxonomic and gene function β-diversity

scientific article

Viral and microbial community dynamics in four aquatic environments.

scientific article

List of works by Elizabeth Dinsdale

A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes

Abrolhos bank reef health evaluated by means of water quality, microbial diversity, benthic cover, and fish biomass data

Assembly rules of reef corals are flexible along a steep climatic gradient

Assessing anchor damage on coral reefs: a case study in selection of environmental indicators

Aura-biomes are present in the water layer above coral reef benthic macro-organisms.

Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle

Barriers to Integration of Bioinformatics into Undergraduate Life Sciences Education

Baseline Assessment of Mesophotic Reefs of the Vitória-Trindade Seamount Chain Based on Water Quality, Microbial Diversity, Benthic Cover and Fish Biomass Data

Baselines and degradation of coral reefs in the Northern Line Islands.

Bioinformatics Core Competencies for Undergraduate Life Sciences Education

Bioinformatics core competencies for undergraduate life sciences education.

Black reefs: iron-induced phase shifts on coral reefs

Can we measure beauty? Computational evaluation of coral reef aesthetics

Characterization of the ELPhiS prophage from Salmonella enterica serovar Enteritidis strain LK5.

Combining de novo and reference-guided assembly with scaffold_builder

Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions

Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome

Copper tolerance and distribution of epibiotic bacteria associated with giant kelp Macrocystis pyrifera in southern California.

Dissecting microbial employment

Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome

Do the organic sulfur compounds DMSP and DMS drive coral microbial associations?

Draft Genome Sequence of the Fish Pathogen Piscirickettsia salmonis

Elevated temperature drives kelp microbiome dysbiosis, while elevated carbon dioxide induces water microbiome disruption.

Functional metagenomic profiling of nine biomes

Functional metagenomic profiling of nine biomes

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum

Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes

Global microbialization of coral reefs.

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Hyperspectral and physiological analyses of coral-algal interactions

Latitude and chlorophyll a density drive the distribution of carbohydrate-active enzymes (CAZymes) in the planktonic microbial fraction of the epipelagic zone

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.

Metagenomic analysis of stressed coral holobionts

Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico

Metagenomic insights into anaerobic metabolism along an Arctic peat soil profile.

Microbial ecology of four coral atolls in the Northern Line Islands.

Microbial processes driving coral reef organic carbon flow.

Mitochondrial genome of the Silvertip shark, <i>Carcharhinus albimarginatus,</i> from the British Indian Ocean Territory

Mitochondrial genome of the Smoothnose wedgefish <i>Rhynchobatus laevis</i> from the Western Indian Ocean

Mitochondrial genome of the silky shark <i>Carcharhinus falciformis</i> from the British Indian Ocean Territory Marine Protected Area

Modeling of the Coral Microbiome: the Influence of Temperature and Microbial Network

Multivariate analysis of functional metagenomes.

NIBLSE: A Network for Integrating Bioinformatics into Life Sciences Education

Nearshore Pelagic Microbial Community Abundance Affects Recruitment Success of Giant Kelp, Macrocystis pyrifera

Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes.

Oxygen minimum zones harbour novel viral communities with low diversity

Rhodoliths holobionts in a changing ocean: host-microbes interactions mediate coralline algae resilience under ocean acidification

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition

Substrate type determines metagenomic profiles from diverse chemical habitats

The Epidermal Microbiome Within an Aggregation of Leopard Sharks (Triakis semifasciata) Has Taxonomic Flexibility with Gene Functional Stability Across Three Time-points

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

The lagoon at Caroline/Millennium atoll, Republic of Kiribati: natural history of a nearly pristine ecosystem

The skin microbiome of the common thresher shark (Alopias vulpinus) has low taxonomic and gene function β-diversity

Viral and microbial community dynamics in four aquatic environments.