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List of works by Faramarz Mehrnejad

A cyclic peptide reproducing the α1 helix of VEGF-B binds to VEGFR-1 and VEGFR-2 and inhibits angiogenesis and tumor growth

scientific article published on 19 February 2019

A new efficient protocol for directed differentiation of retinal pigmented epithelial cells from normal and retinal disease induced pluripotent stem cells.

scientific article published on 3 February 2012

An in silico approach to investigate the source of the controversial interpretations about the phenotypic results of the human AhR-gene G1661A polymorphism.

scientific article

Aryl hydrocarbon receptor gene transitions (c.-742C>T; c.1661G>A) and idiopathic male infertility: a case-control study with in silico and meta-analysis.

scientific article published on 15 July 2017

Biochemical Characterization and Computational Identification of Mycobacterium tuberculosis Pyrazinamidase in Some Pyrazinamide-Resistant Isolates of Iran.

scientific article

Chitosan nanoparticles-trypsin interactions: Bio-physicochemical and molecular dynamics simulation studies.

scientific article

Computational insights into pH-dependence of structure and dynamics of pyrazinamidase: A comparison of wild type and mutants

article

Effect of sorbitol and glycerol on the stability of trypsin and difference between their stabilization effects in the various solvents

scientific article published on 04 June 2015

Effect of the Met148Leu Mutation on the Structure and Dynamics of the Rusticyanin Protein from Acidithiobacillus sp. FJ2

scientific article published on 28 May 2020

Effects of Single-Walled Carbon Nanotube on the Conformation of Human Hepcidin: Molecular Dynamics Simulation and Binding Free Energy Calculations

article

Effects of metal-ion replacement on pyrazinamidase activity: A quantum mechanical study.

scientific article published on 2 February 2017

Effects of osmolytes on the helical conformation of model peptide: molecular dynamics simulation.

scientific article

Effects of sorbitol and glycerol on the structure, dynamics, and stability of Mycobacterium tuberculosis pyrazinamidase

scientific article published on 27 October 2016

Efficient megalin targeted delivery to renal proximal tubular cells mediated by modified-polymyxin B-polyethylenimine based nano-gene-carriers

scientific article published on 14 May 2017

Encapsulation of an endostatin peptide in liposomes: Stability, release, and cytotoxicity study

scientific article published on 15 October 2019

Follicle-stimulating hormone encapsulation in the cholesterol-modified chitosan nanoparticles via molecular dynamics simulations and binding free energy calculations

scientific article published on 07 July 2017

Identification of the Crucial Residues in the Early Insertion of Pardaxin into Different Phospholipid Bilayers

scientific article published on 16 March 2017

Insight into the Microcosm of the Human Growth Hormone and Its Interactions with Polymers and Copolymers: A Molecular Dynamics Perspective

scientific article published on 23 December 2020

Insight into the interactions, residue snorkeling, and membrane disordering potency of a single antimicrobial peptide into different lipid bilayers

scientific article published on 10 November 2017

Interaction of Piscidin-1 with zwitterionic versus anionic membranes: a comparative molecular dynamics study.

scientific article published on 12 November 2012

Mechanisms of amphipathic helical peptide denaturation by guanidinium chloride and urea: a molecular dynamics simulation study.

scientific article published on 10 August 2010

Molecular Basis for Membrane Selectivity of Antimicrobial Peptide Pleurocidin in the Presence of Different Eukaryotic and Prokaryotic Model Membranes

scientific article published on 09 July 2019

Molecular Insight into Human Lysozyme and Its Ability to Form Amyloid Fibrils in High Concentrations of Sodium Dodecyl Sulfate: A View from Molecular Dynamics Simulations

scientific article published on 21 October 2016

Molecular Insight into the Interaction between Camptothecin and Acyclic Cucurbit[4]urils as Efficient Nanocontainers in Comparison with Cucurbit[7]uril: Molecular Docking and Molecular Dynamics Simulation

scientific article published on 29 January 2020

Molecular Self-Assembly Strategy for Encapsulation of an Amphipathic α-Helical Antimicrobial Peptide into the Different Polymeric and Copolymeric Nanoparticles

scientific article published on 06 December 2018

Molecular dynamics simulation study of the interaction of Piscidin 1 with DPPC bilayers: structure-activity relationship

scientific article published on 01 February 2010

Molecular insights into the interactions of GF-17 with the gram-negative and gram-positive bacterial lipid bilayers

scientific article published on 04 August 2018

Paclitaxel interaction with cucurbit [7]uril and acyclic Cucurbit[4]uril nanocontainers: A computational approach

scientific article published on 11 May 2019

Protein adsorption onto polysaccharides: Comparison of chitosan and chitin polymers.

scientific article published on 14 March 2018

Structural Studies on an Anti-Angiogenic Peptide Using Molecular Modeling

scientific article published on 01 October 2020

Structural and dynamical studies of Humanin in water and TFE/water mixture: a molecular dynamics simulation.

scientific article

Structural studies of SNARE complex and its interaction with complexin by molecular dynamics simulation.

scientific article published in June 2010

Study of orientation and penetration of LAH4 into lipid bilayer membranes: pH and composition dependence.

scientific article published on 30 April 2014

The Molecular Basis of the Sodium Dodecyl Sulfate Effect on Human Ubiquitin Structure: A Molecular Dynamics Simulation Study.

scientific article published in February 2018

The antiangiogenic and antitumor activities of the N-terminal fragment of endostatin augmented by Ile/Arg substitution: The overall structure implicated the biological activity

scientific article published on 27 September 2016

The combinatorial effects of osmolytes and alcohols on the stability of pyrazinamidase: Methanol affects the enzyme stability through hydrophobic interactions and hydrogen bonds

scientific article published on 9 November 2017

The potential impact of carboxylic-functionalized multi-walled carbon nanotubes on trypsin: A Comprehensive spectroscopic and molecular dynamics simulation study.

scientific article published in June 2018

The role of intermolecular interactions on the encapsulation of human insulin into the chitosan and cholesterol-grafted chitosan polymers

scientific article published on 26 December 2018

The structural properties of magainin in water, TFE/water, and aqueous urea solutions: molecular dynamics simulations

scientific article published on 01 June 2007

Understanding the interactions of human follicle stimulating hormone with single-walled carbon nanotubes by molecular dynamics simulation and free energy analysis

scientific article published on 15 June 2017