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List of works by Fabio Cumbo

A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity

scientific article published on 15 December 2020

Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

GIANT: a cytoscape plugin for modular networks

scientific article

IWTomics: testing high-resolution sequence-based "Omics" data at multiple locations and scales.

scientific article published on 20 February 2018

Investigating transcription factor synergism in humans

scientific article published on 23 October 2017

Large-scale genome-wide analysis links lactic acid bacteria from food with the gut microbiome

scientific article published on 25 May 2020

OpenGDC: Unifying, Modeling, Integrating Cancer Genomic Data and Clinical Metadata

scientific article published in 2020

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

scientific article published on 19 May 2020

TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas

scientific article

Ten quick tips for avoiding pitfalls in multi-omics data integration analyses

scientific article published in 2023

Time dynamics of protein complexes in the AD11 transgenic mouse model for Alzheimer's disease like pathology

scientific article published on 29 April 2015

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