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List of works by Joerg Doellinger

An iterative and automated computational pipeline for untargeted strain-level identification using MS/MS spectra from pathogenic samples

scientific article published on 25 October 2019

Combined Proteomics/Genomics Approach Reveals Proteomic Changes of Mature Virions as a Novel Poxvirus Adaptation Mechanism.

scientific article published on 10 November 2017

Comparison of real-time PCR and MassTag PCR for the multiplex detection of highly pathogenic agents.

scientific article published on 20 July 2012

Comparison of shedding characteristics of seasonal influenza virus (sub)types and influenza A(H1N1)pdm09; Germany, 2007-2011

scientific article

Comparison of the Cowpox Virus and Vaccinia Virus Mature Virion Proteome: Analysis of the Species- and Strain-Specific Proteome

scientific article

DMSO as a mobile phase additive enhances detection of ubiquitination sites by nanoLC-ESI-MS/MS.

scientific article published on 29 November 2017

Fusaricidins from Paenibacillus polymyxa M-1, a family of lipohexapeptides of unusual complexity-a mass spectrometric study.

scientific article

Genome mining of lipopeptide biosynthesis of Paenibacillus polymyxa E681 in combination with mass spectrometry - discovery of the lipoheptapeptide paenilipoheptin

scientific article published on 25 January 2018

Identification of Microorganisms by Liquid Chromatography-Mass Spectrometry (LC-MS1) and in silico Peptide Mass Libraries

scientific article published on 30 September 2020

Isolation Window Optimization of Data-Independent Acquisition Using Predicted Libraries for Deep and Accurate Proteome Profiling

scientific article published on 25 August 2020

Perspective on Proteomics for Virus Detection in Clinical Samples

scientific article published on 22 October 2020

Pipasic: similarity and expression correction for strain-level identification and quantification in metaproteomics.

scientific article published on June 2014

Proteome analysis of vaccinia virus IHD-W-infected HEK 293 cells with 2-dimensional gel electrophoresis and MALDI-PSD-TOF MS of on solid phase support N-terminally sulfonated peptides.

scientific article

Purple: A Computational Workflow for Strategic Selection of Peptides for Viral Diagnostics Using MS-Based Targeted Proteomics

scientific article published on 08 June 2019

Sample Preparation by Easy Extraction and Digestion (SPEED) - A Universal, Rapid, and Detergent-free Protocol for Proteomics Based on Acid Extraction

scientific article published on 21 November 2019

The cellular ceramide transport protein CERT promotes Chlamydia psittaci infection and controls bacterial sphingolipid uptake.

scientific article published on 19 May 2017

The role of facemasks and hand hygiene in the prevention of influenza transmission in households: results from a cluster randomised trial; Berlin, Germany, 2009-2011.

scientific article

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